RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 RFC2P35250 354 aa15.24■□□□□ 0.03
CLTCL1-212ENST00000622493 USP8P40818 1118 aa15.24■□□□□ 0.03
CLTCL1-212ENST00000622493 ASPAP45381 313 aa15.24■□□□□ 0.03
CLTCL1-212ENST00000622493 GUCY2FP51841 1108 aa15.24■□□□□ 0.03
CLTCL1-212ENST00000622493 C9orf57Q5W0N0 161 aa15.24■□□□□ 0.03
CLTCL1-212ENST00000622493 ZNF571Q7Z3V5 609 aaPredicted RBP15.24■□□□□ 0.03
CLTCL1-212ENST00000622493 TXLNBQ8N3L3 684 aa15.24■□□□□ 0.03
CLTCL1-212ENST00000622493 LPPQ93052 612 aa15.24■□□□□ 0.03
CLTCL1-212ENST00000622493 C18orf25Q96B23 403 aaPredicted RBP15.24■□□□□ 0.03
CLTCL1-212ENST00000622493 ELMO3Q96BJ8 720 aa15.24■□□□□ 0.03
CLTCL1-212ENST00000622493 ZFP42Q96MM3 310 aa15.24■□□□□ 0.03
CLTCL1-212ENST00000622493 ZNF560Q96MR9 790 aa15.24■□□□□ 0.03
CLTCL1-212ENST00000622493 DESI2Q9BSY9 194 aa15.24■□□□□ 0.03
CLTCL1-212ENST00000622493 WNT8AQ9H1J5 351 aa15.24■□□□□ 0.03
CLTCL1-212ENST00000622493 ELAC1Q9H777 363 aaKnown RBP15.24■□□□□ 0.03
CLTCL1-212ENST00000622493 LUC7LQ9NQ29 371 aaKnown RBP15.24■□□□□ 0.03
CLTCL1-212ENST00000622493 RNF216Q9NWF9 866 aaPredicted RBP15.24■□□□□ 0.03
CLTCL1-212ENST00000622493 ADAMTS1Q9UHI8 967 aa15.24■□□□□ 0.03
CLTCL1-212ENST00000622493 CYP26A1O43174 497 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 KRT5P13647 590 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 LRRC26Q2I0M4 334 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 C10orf76Q5T2E6 689 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 C17orf53Q8N3J3 647 aaPredicted RBP15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 UBR7Q8N806 425 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 LINC01599Q8WXQ3 324 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 PPP1R13BQ96KQ4 1090 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 SYT11Q9BT88 431 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 PPP1R12CQ9BZL4 782 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 TMEM161AQ9NX61 479 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 NXF1Q9UBU9 619 aaKnown RBP15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 CYP11B1P15538 503 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 PDE6CP51160 858 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 CCL23P55773 120 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 TNNC1P63316 161 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 GFPT1Q06210 699 aaPredicted RBP15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 GRIK3Q13003 919 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 TMEM270Q6UE05 265 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 ZNF662Q6ZS27 426 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 ZNF677Q86XU0 584 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 REXO1L1PQ8IX06 675 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 ACRBPQ8NEB7 543 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 SCLYQ96I15 445 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 CISHQ9NSE2 258 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 TRMT1Q9NXH9 659 aaKnown RBP15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 PCDHB4Q9Y5E5 795 aa15.23■□□□□ 0.03
CLTCL1-212ENST00000622493 A0A087X0T9 212 aa15.22■□□□□ 0.03
CLTCL1-212ENST00000622493 USP27XA6NNY8 438 aa15.22■□□□□ 0.03
CLTCL1-212ENST00000622493 ENPP3O14638 875 aa15.22■□□□□ 0.03
CLTCL1-212ENST00000622493 FAM228BP0C875 321 aa15.22■□□□□ 0.03
CLTCL1-212ENST00000622493 RPL9P32969 192 aaKnown RBP15.22■□□□□ 0.03
CLTCL1-212ENST00000622493 CYP2C18P33260 490 aa15.22■□□□□ 0.03
CLTCL1-212ENST00000622493 SOX4Q06945 474 aaPredicted RBP15.22■□□□□ 0.03
CLTCL1-212ENST00000622493 NAB2Q15742 525 aa15.22■□□□□ 0.03
CLTCL1-212ENST00000622493 GLB1LQ6UWU2 654 aa15.22■□□□□ 0.03
CLTCL1-212ENST00000622493 GPIHBP1Q8IV16 184 aa15.22■□□□□ 0.03
CLTCL1-212ENST00000622493 RNF169Q8NCN4 708 aa15.22■□□□□ 0.03
CLTCL1-212ENST00000622493 EPS8L1Q8TE68 723 aa15.22■□□□□ 0.03
CLTCL1-212ENST00000622493 RSPH1Q8WYR4 309 aa15.22■□□□□ 0.03
CLTCL1-212ENST00000622493 AGPAT1Q99943 283 aa15.22■□□□□ 0.03
CLTCL1-212ENST00000622493 KANSL3Q9P2N6 904 aa15.22■□□□□ 0.03
CLTCL1-212ENST00000622493 NOCTQ9UK39 431 aaKnown RBP15.22■□□□□ 0.03
CLTCL1-212ENST00000622493 REXO2Q9Y3B8 237 aaKnown RBP15.22■□□□□ 0.03
CLTCL1-212ENST00000622493 DYNC1I1O14576 645 aa15.21■□□□□ 0.03
CLTCL1-212ENST00000622493 ZNF263O14978 683 aa15.21■□□□□ 0.03
CLTCL1-212ENST00000622493 TUBB4AP04350 444 aa15.21■□□□□ 0.03
CLTCL1-212ENST00000622493 TNFAIP3P21580 790 aa15.21■□□□□ 0.03
CLTCL1-212ENST00000622493 PAX3P23760 479 aa15.21■□□□□ 0.03
CLTCL1-212ENST00000622493 TAF6P49848 677 aa15.21■□□□□ 0.03
CLTCL1-212ENST00000622493 SCNN1GP51170 649 aa15.21■□□□□ 0.03
CLTCL1-212ENST00000622493 CDR2Q01850 454 aa15.21■□□□□ 0.03
CLTCL1-212ENST00000622493 UBE2Q1Q7Z7E8 422 aa15.21■□□□□ 0.03
CLTCL1-212ENST00000622493 SLC47A2Q86VL8 602 aa15.21■□□□□ 0.03
CLTCL1-212ENST00000622493 RBBP8NLQ8NC74 664 aaPredicted RBP15.21■□□□□ 0.03
CLTCL1-212ENST00000622493 SLC30A5Q8TAD4 765 aa15.21■□□□□ 0.03
CLTCL1-212ENST00000622493 DDX27Q96GQ7 796 aaKnown RBP15.21■□□□□ 0.03
CLTCL1-212ENST00000622493 RNF19AQ9NV58 838 aa15.21■□□□□ 0.03
CLTCL1-212ENST00000622493 MIOSQ9NXC5 875 aa15.21■□□□□ 0.03
CLTCL1-212ENST00000622493 GDAP2Q9NXN4 497 aa15.21■□□□□ 0.03
CLTCL1-212ENST00000622493 NAGPAQ9UK23 515 aa15.21■□□□□ 0.03
CLTCL1-212ENST00000622493 PCDHA13Q9Y5I0 950 aa15.21■□□□□ 0.03
CLTCL1-212ENST00000622493 ATP8B3O60423 1300 aa15.21■□□□□ 0.02
CLTCL1-212ENST00000622493 KPNA7A9QM74 516 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 KIAA0355O15063 1070 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 TIMP1P01033 207 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 WEE2P0C1S8 567 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 FAM163BP0C2L3 166 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 VAV2P52735 878 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 ZNF132P52740 706 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 CYP27A1Q02318 531 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 SV2CQ496J9 727 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 ALKBH5Q6P6C2 394 aaKnown RBP15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 KIAA1328Q86T90 577 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 GLYCTKQ8IVS8 523 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 UROC1Q96N76 676 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 POLIQ9UNA4 740 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 SCN1AP35498 2009 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 DDX3XO00571 662 aaKnown RBP eCLIP15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 HOXA2O43364 376 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 CD58P19256 250 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms