RNA–Protein interactions for RNA: ENST00000622383.1

NKX2-3-202, Transcript of NK2 homeobox 3, humanhuman

TSL 5 BASIC

Gene NKX2-3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-202ENST00000622383 SMARCAD1Q9H4L7 1026 aa24.28■■□□□ 1.48
NKX2-3-202ENST00000622383 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.28■■□□□ 1.48
NKX2-3-202ENST00000622383 PASKQ96RG2 1323 aa24.28■■□□□ 1.48
NKX2-3-202ENST00000622383 B4GALT5O43286 388 aa24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 MMP8P22894 467 aa24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 HPDP32754 393 aaPredicted RBP24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 MDH1P40925 334 aaKnown RBP24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 EIF3BP55884 814 aaKnown RBP24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 TAS2R40P59535 323 aa24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 NLRP4Q96MN2 994 aa24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 JPH2Q9BR39 696 aaPredicted RBP24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 NIF3L1Q9GZT8 377 aa24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 CHST7Q9NS84 486 aa24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 LCMT1Q9UIC8 334 aa24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 GJB6O95452 261 aa24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 SHBGP04278 402 aa24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 CD58P19256 250 aa24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 LSP1P33241 339 aa24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 GJA5P36382 358 aa24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 SURF1Q15526 300 aa24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 SGSM1Q2NKQ1 1148 aa24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 ATF7IP2Q5U623 682 aa24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 PPP1R2P3Q6NXS1 205 aa24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 ATG4AQ8WYN0 398 aa24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 CISHQ9NSE2 258 aa24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 SCINQ9Y6U3 715 aa24.27■■□□□ 1.48
NKX2-3-202ENST00000622383 TP73O15350 636 aa24.26■■□□□ 1.47
NKX2-3-202ENST00000622383 PSTPIP1O43586 416 aa24.26■■□□□ 1.47
NKX2-3-202ENST00000622383 HBP1O60381 514 aa24.26■■□□□ 1.47
NKX2-3-202ENST00000622383 CLCN3P51790 818 aa24.26■■□□□ 1.47
NKX2-3-202ENST00000622383 KRT71Q3SY84 523 aa24.26■■□□□ 1.47
NKX2-3-202ENST00000622383 C9orf131Q5VYM1 1079 aa24.26■■□□□ 1.47
NKX2-3-202ENST00000622383 EEF1DP3Q658K8 133 aa24.26■■□□□ 1.47
NKX2-3-202ENST00000622383 EFCAB12Q6NXP0 572 aa24.26■■□□□ 1.47
NKX2-3-202ENST00000622383 SRLQ86TD4 932 aa24.26■■□□□ 1.47
NKX2-3-202ENST00000622383 THNSL1Q8IYQ7 743 aa24.26■■□□□ 1.47
NKX2-3-202ENST00000622383 XYLT2Q9H1B5 865 aa24.26■■□□□ 1.47
NKX2-3-202ENST00000622383 MINDY3Q9H8M7 445 aa24.26■■□□□ 1.47
NKX2-3-202ENST00000622383 PARVAQ9NVD7 372 aa24.26■■□□□ 1.47
NKX2-3-202ENST00000622383 BCCIPQ9P287 314 aaKnown RBP eCLIP24.26■■□□□ 1.47
NKX2-3-202ENST00000622383 DCDC2CA8MYV0 355 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 INO80B-WBP1J3KQ70 363 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 TLR3O15455 904 aaKnown RBP24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 ZEB2O60315 1214 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 TFAMQ00059 246 aaKnown RBP24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 MBTD1Q05BQ5 628 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 KLF1Q13351 362 aaPredicted RBP24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 SNX1Q13596 522 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 TFDP1Q14186 410 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 SKIDA1Q1XH10 827 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 UBAP2Q5T6F2 1119 aaKnown RBP24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 CDR2LQ86X02 465 aaPredicted RBP24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 RHOT1Q8IXI2 618 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 CEP120Q8N960 986 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 FEZF2Q8TBJ5 459 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 MAIP1Q8WWC4 291 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 INO80BQ9C086 356 aaPredicted RBP24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 RNPEPQ9H4A4 650 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 MTRF1LQ9UGC7 380 aaKnown RBP24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 NOVA2Q9UNW9 492 aaKnown RBP24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 IQCF3P0C7M6 154 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 CCT5P48643 541 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 KRT17Q04695 432 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 IFFO1Q0D2I5 559 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 TTLL4Q14679 1199 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 PPP1R7Q15435 360 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 ZNF568Q3ZCX4 644 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 USP50Q70EL3 339 aaPredicted RBP24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 ZC3H15Q8WU90 426 aaKnown RBP24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 DCLK3Q9C098 648 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 SEMA4AQ9H3S1 761 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 EFCC1Q9HA90 598 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 SLC12A6Q9UHW9 1150 aa24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 R3HDM2Q9Y2K5 976 aaKnown RBP24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 RRP15Q9Y3B9 282 aaKnown RBP24.25■■□□□ 1.47
NKX2-3-202ENST00000622383 B4GALT4O60513 344 aa24.24■■□□□ 1.47
NKX2-3-202ENST00000622383 BRD2P25440 801 aaKnown RBP24.24■■□□□ 1.47
NKX2-3-202ENST00000622383 ASPAP45381 313 aa24.24■■□□□ 1.47
NKX2-3-202ENST00000622383 OSTNP61366 133 aa24.24■■□□□ 1.47
NKX2-3-202ENST00000622383 TRPC3Q13507 836 aa24.24■■□□□ 1.47
NKX2-3-202ENST00000622383 ZNF394Q53GI3 561 aa24.24■■□□□ 1.47
NKX2-3-202ENST00000622383 ILDR2Q71H61 639 aa24.24■■□□□ 1.47
NKX2-3-202ENST00000622383 KATNAL2Q8IYT4 538 aa24.24■■□□□ 1.47
NKX2-3-202ENST00000622383 ARFGAP2Q8N6H7 521 aa24.24■■□□□ 1.47
NKX2-3-202ENST00000622383 LOC102724159A0A0B4J2E5 919 aa24.23■■□□□ 1.47
NKX2-3-202ENST00000622383 TCRBV5S1A1TA0A578 114 aa24.23■■□□□ 1.47
NKX2-3-202ENST00000622383 TULP2O00295 520 aa24.23■■□□□ 1.47
NKX2-3-202ENST00000622383 C22orf31O95567 290 aa24.23■■□□□ 1.47
NKX2-3-202ENST00000622383 WEE2P0C1S8 567 aa24.23■■□□□ 1.47
NKX2-3-202ENST00000622383 RALAP11233 206 aa24.23■■□□□ 1.47
NKX2-3-202ENST00000622383 MAN1A1P33908 653 aa24.23■■□□□ 1.47
NKX2-3-202ENST00000622383 RPL7AP62424 266 aaKnown RBP24.23■■□□□ 1.47
NKX2-3-202ENST00000622383 PWP2Q15269 919 aaKnown RBP24.23■■□□□ 1.47
NKX2-3-202ENST00000622383 DENND2CQ68D51 928 aa24.23■■□□□ 1.47
NKX2-3-202ENST00000622383 ANKS1BQ7Z6G8 1248 aa24.23■■□□□ 1.47
NKX2-3-202ENST00000622383 SHCBP1Q8NEM2 672 aa24.23■■□□□ 1.47
NKX2-3-202ENST00000622383 HEMGNQ9BXL5 484 aa24.23■■□□□ 1.47
NKX2-3-202ENST00000622383 FAM129AQ9BZQ8 928 aa24.23■■□□□ 1.47
NKX2-3-202ENST00000622383 TMEM191CA6NGB0 347 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms