RNA–Protein interactions for RNA: ENST00000622098.4

CDK16-223, Transcript of cyclin dependent kinase 16, human

TSL 2 BASIC

Gene CDK16, Length 2,968 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-223	ENST00000622098	CYP26B1	Q9NR63	512 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	COL4A5	P29400	1685 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	IGF2BP3	O00425	579 aa	Known RBP eCLIP	18.81	■□□□□ 0.6	2e-6	■□□□□ 10.3
CDK16-223	ENST00000622098	VNN1	O95497	513 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	KRT10	P13645	584 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	CCND2	P30279	289 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	MAGEA4	P43358	317 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	CUL2	Q13617	745 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	STAT4	Q14765	748 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	ABRA	Q8N0Z2	381 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	GBP7	Q8N8V2	638 aa	Predicted RBP	18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	RMDN2	Q96LZ7	410 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	PAIP2	Q9BPZ3	127 aa	Known RBP	18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	PDLIM7	Q9NR12	457 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	RNF146	Q9NTX7	359 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	PSME4	Q14997	1843 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	KLRC2	P26717	231 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	COPS2	P61201	443 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	CLDN10	P78369	228 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	BNIP1	Q12981	228 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	MTERF2	Q49AM1	385 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	CGB2	Q6NT52	195 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	MIS18BP1	Q6P0N0	1132 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	GLIS1	Q8NBF1	620 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	EXD1	Q8NHP7	514 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	KLHL29	Q96CT2	875 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	MAGEB18	Q96M61	343 aa		18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	AGO2	Q9UKV8	859 aa	Known RBP	18.81	■□□□□ 0.6
CDK16-223	ENST00000622098	PSAP	P07602	524 aa		18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	KCNA2	P16389	499 aa		18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	GPRASP2	Q96D09	838 aa		18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	ATG4C	Q96DT6	458 aa		18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	SENP7	Q9BQF6	1050 aa		18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	TACO1	Q9BSH4	297 aa	Known RBP	18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	FHDC1	Q9C0D6	1143 aa	Predicted RBP	18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	POTEJ	P0CG39	1038 aa		18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	TCF4	P15884	667 aa		18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	ATF7	P17544	494 aa	Predicted RBP	18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	ALDH5A1	P51649	535 aa	Predicted RBP	18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	NFX1	Q12986	1120 aa	Known RBP	18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	STRN3	Q13033	797 aa		18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	PLEKHA7	Q6IQ23	1121 aa		18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	FAM47E	Q6ZV65	393 aa		18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	N4BP2L2	Q92802	583 aa	Predicted RBP	18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	ZBTB45	Q96K62	511 aa	Predicted RBP	18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	KIAA1586	Q9HCI6	787 aa		18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	JPH1	Q9HDC5	661 aa	Predicted RBP	18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	SAYSD1	Q9NPB0	183 aa		18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	PRKAG3	Q9UGI9	489 aa		18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	DNPEP	Q9ULA0	475 aa		18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	18.8	■□□□□ 0.6
CDK16-223	ENST00000622098	VWA5A	O00534	786 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	ZSCAN5DP	P0CG00	497 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	RPL7A	P62424	266 aa	Known RBP	18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	ENPEP	Q07075	957 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	RIPK1	Q13546	671 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	ZNF268	Q14587	947 aa	Predicted RBP	18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	ZBTB41	Q5SVQ8	909 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	ZCCHC9	Q8N567	271 aa	Known RBP	18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	RBBP8NL	Q8NC74	664 aa	Predicted RBP	18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	RXFP1	Q9HBX9	757 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	KLHL14	Q9P2G3	628 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	L3MBTL1	Q9Y468	752 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	WDR81	Q562E7	1941 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	EXOC1L	A0A1B0GW35	172 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	RGS20	O76081	388 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	FOXN2	P32314	431 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	RTP1	P59025	263 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	MKRN3	Q13064	507 aa	Known RBP	18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	PPP1R21	Q6ZMI0	780 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	TRIM72	Q6ZMU5	477 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	RELL1	Q8IUW5	271 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	MTMR14	Q8NCE2	650 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	TMEM143	Q96AN5	459 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	HAPLN2	Q9GZV7	340 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	EURL	Q9NYK6	297 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	RBAK	Q9NYW8	714 aa	Predicted RBP	18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	ANKFY1	Q9P2R3	1169 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	ZNF148	Q9UQR1	794 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	SCIN	Q9Y6U3	715 aa		18.79	■□□□□ 0.6
CDK16-223	ENST00000622098	ZNF541	Q9H0D2	1346 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	SPAG7	O75391	227 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	TAC1	P20366	129 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	MGAT5	Q09328	741 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	ACCSL	Q4AC99	568 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	CRELD2	Q6UXH1	353 aa	Predicted RBP	18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	CAPN12	Q6ZSI9	719 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	PHF13	Q86YI8	300 aa	Predicted RBP	18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	ANKRD35	Q8N283	1001 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	PLCD4	Q9BRC7	762 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	PITPNM3	Q9BZ71	974 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	DKC1	O60832	514 aa	Known RBP eCLIP	18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	ELF1	P32519	619 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	MTFR1	Q15390	333 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	RPAIN	Q86UA6	219 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	RTKN2	Q8IZC4	609 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	FEZF2	Q8TBJ5	459 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	STAMBPL1	Q96FJ0	436 aa		18.78	■□□□□ 0.6
CDK16-223	ENST00000622098	VCPIP1	Q96JH7	1222 aa		18.78	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms