RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 DRP2Q13474 957 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 AUHQ13825 339 aaKnown RBP10.03□□□□□ -0.8
PDPN-212ENST00000621990 VGLL4Q14135 290 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 PACS2Q86VP3 889 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 ATG4AQ8WYN0 398 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 FAM167AQ96KS9 214 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 C11orf70Q9BRQ4 267 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 CDC42EP4Q9H3Q1 356 aaKnown RBP10.03□□□□□ -0.8
PDPN-212ENST00000621990 AZI2Q9H6S1 392 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 TMEM51Q9NW97 253 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 R3HDM2Q9Y2K5 976 aaKnown RBP10.03□□□□□ -0.8
PDPN-212ENST00000621990 ANK1P16157 1881 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 IGKV6-21A0A0C4DH24 114 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 O00370 1275 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 TCEA3O75764 348 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 KIAA0754O94854 1291 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 RALAP11233 206 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 DRD4P21917 467 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 IFI35P80217 286 aaPredicted RBP10.02□□□□□ -0.81
PDPN-212ENST00000621990 QPCTQ16769 361 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 C2CD6Q53TS8 623 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 MMS22LQ6ZRQ5 1243 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 GPC2Q8N158 579 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 EPS8L3Q8TE67 593 aaKnown RBP10.02□□□□□ -0.81
PDPN-212ENST00000621990 PRPF31Q8WWY3 499 aaKnown RBP10.02□□□□□ -0.81
PDPN-212ENST00000621990 ZNF606Q8WXB4 792 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 TRAIPQ9BWF2 469 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 MRPL4Q9BYD3 311 aaKnown RBP10.02□□□□□ -0.81
PDPN-212ENST00000621990 TMEM191CA6NGB0 347 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 TTLL13PA6NNM8 815 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 ZBTB42B2RXF5 422 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 RASGRF2O14827 1237 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 LGR5O75473 907 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 TMEM191BP0C7N4 346 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 CHN1P15882 459 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 PROZP22891 400 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 CDH5P33151 784 aaPredicted RBP10.02□□□□□ -0.81
PDPN-212ENST00000621990 TCF7P36402 384 aaPredicted RBP10.02□□□□□ -0.81
PDPN-212ENST00000621990 MCL1Q07820 350 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 MKRN4PQ13434 485 aaPredicted RBP10.02□□□□□ -0.81
PDPN-212ENST00000621990 TTC31Q49AM3 519 aaPredicted RBP10.02□□□□□ -0.81
PDPN-212ENST00000621990 LRRC38Q5VT99 294 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 IER5Q5VY09 327 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 PASD1Q8IV76 773 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 OTUD6BQ8N6M0 293 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 FEZF2Q8TBJ5 459 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 MDM1Q8TC05 714 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 SEPT1Q8WYJ6 367 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 CHMP6Q96FZ7 201 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 SERPINB12Q96P63 405 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 ACO2Q99798 780 aaKnown RBP10.02□□□□□ -0.81
PDPN-212ENST00000621990 OSBPL8Q9BZF1 889 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 SPATC1LQ9H0A9 340 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 IP6K2Q9UHH9 426 aa10.02□□□□□ -0.81
PDPN-212ENST00000621990 IRF6O14896 467 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 TLR3O15455 904 aaKnown RBP10.01□□□□□ -0.81
PDPN-212ENST00000621990 THAP12O43422 761 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 TTC4O95801 387 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 CST3P01034 146 aaPredicted RBP10.01□□□□□ -0.81
PDPN-212ENST00000621990 PTPN7P35236 360 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 CHKAP35790 457 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 LIG3P49916 1009 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 SNX1Q13596 522 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 MXD4Q14582 209 aaPredicted RBP10.01□□□□□ -0.81
PDPN-212ENST00000621990 PLCB4Q15147 1175 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 PPP1R15BQ5SWA1 713 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 DAB2IPQ5VWQ8 1189 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 SCARA3Q6AZY7 606 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 DRICH1Q6PGQ1 229 aaPredicted RBP10.01□□□□□ -0.81
PDPN-212ENST00000621990 ANKS1BQ7Z6G8 1248 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 EXOC8Q8IYI6 725 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 BBXQ8WY36 941 aaPredicted RBP10.01□□□□□ -0.81
PDPN-212ENST00000621990 SEC16BQ96JE7 1060 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 ZNF518BQ9C0D4 1074 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 ASIC3Q9UHC3 531 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 CPSF3Q9UKF6 684 aaKnown RBP10.01□□□□□ -0.81
PDPN-212ENST00000621990 ATF2P15336 505 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 KLRC2P26717 231 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 TNFSF9P41273 254 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 ITGA8P53708 1063 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 ZNF252P-AS1Q0IIN9 211 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 SURF1Q15526 300 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 PHLDB2Q86SQ0 1253 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 NIPA2Q8N8Q9 360 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 BBOF1Q8ND07 529 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 TCP11Q8WWU5 503 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 DDX23Q9BUQ8 820 aaKnown RBP10.01□□□□□ -0.81
PDPN-212ENST00000621990 IMPG2Q9BZV3 1241 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 PTPRHQ9HD43 1115 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 PCDHGC3Q9UN70 934 aa10.01□□□□□ -0.81
PDPN-212ENST00000621990 SOCS7O14512 581 aa10□□□□□ -0.81
PDPN-212ENST00000621990 OGTO15294 1046 aa10□□□□□ -0.81
PDPN-212ENST00000621990 CALB1P05937 261 aa10□□□□□ -0.81
PDPN-212ENST00000621990 LAMTOR4Q0VGL1 99 aa10□□□□□ -0.81
PDPN-212ENST00000621990 TMEM132AQ24JP5 1023 aa10□□□□□ -0.81
PDPN-212ENST00000621990 SGSM1Q2NKQ1 1148 aa10□□□□□ -0.81
PDPN-212ENST00000621990 KCNV1Q6PIU1 500 aa10□□□□□ -0.81
PDPN-212ENST00000621990 TSHZ1Q6ZSZ6 1077 aa10□□□□□ -0.81
PDPN-212ENST00000621990 PLPPR4Q7Z2D5 763 aa10□□□□□ -0.81
PDPN-212ENST00000621990 RCOR2Q8IZ40 523 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms