RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 NXF1Q9UBU9 619 aaKnown RBP11.43□□□□□ -0.58
CPNE3-212ENST00000621783 INPP5FQ9Y2H2 1132 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 R3HCC1Q9Y3T6 440 aaKnown RBP11.43□□□□□ -0.58
CPNE3-212ENST00000621783 PCDHB4Q9Y5E5 795 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 ADGRG1Q9Y653 693 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 BZW2Q9Y6E2 419 aaKnown RBP11.43□□□□□ -0.58
CPNE3-212ENST00000621783 EPN1Q9Y6I3 576 aaPredicted RBP11.43□□□□□ -0.58
CPNE3-212ENST00000621783 LTBP2Q14767 1821 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 ALPK3Q96L96 1907 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 EIF3CLB5ME19 914 aaKnown RBP11.42□□□□□ -0.58
CPNE3-212ENST00000621783 PIRO00625 290 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 KIAA0355O15063 1070 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 INPPL1O15357 1258 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 CYP26A1O43174 497 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 AKR1B10O60218 316 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 EOMESO95936 686 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 THP07101 528 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 CCDC175P0C221 793 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 CD58P19256 250 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 RFC2P35250 354 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 RAP1GAPP47736 663 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 TNNC1P63316 161 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 MYO1EQ12965 1108 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 GRIK3Q13003 919 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 WDR72Q3MJ13 1102 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 CLLU1OSQ5K130 101 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 DEFB128Q7Z7B8 93 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 CCAR2Q8N163 923 aaKnown RBP11.42□□□□□ -0.58
CPNE3-212ENST00000621783 RBBP8NLQ8NC74 664 aaPredicted RBP11.42□□□□□ -0.58
CPNE3-212ENST00000621783 FAXDC2Q96IV6 333 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 PPP1R13BQ96KQ4 1090 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 EIF3CQ99613 913 aaKnown RBP11.42□□□□□ -0.58
CPNE3-212ENST00000621783 SYT11Q9BT88 431 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 KCND1Q9NSA2 647 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 TMEM161AQ9NX61 479 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 NOCTQ9UK39 431 aaKnown RBP11.42□□□□□ -0.58
CPNE3-212ENST00000621783 CNTN6Q9UQ52 1028 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 PPP2R2CQ9Y2T4 447 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 REXO2Q9Y3B8 237 aaKnown RBP11.42□□□□□ -0.58
CPNE3-212ENST00000621783 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.42□□□□□ -0.58
CPNE3-212ENST00000621783 MICAL3Q7RTP6 2002 aa11.42□□□□□ -0.58
CPNE3-212ENST00000621783 TDRD15B5MCY1 1934 aaKnown RBP11.41□□□□□ -0.58
CPNE3-212ENST00000621783 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.41□□□□□ -0.58
CPNE3-212ENST00000621783 TRIM43BA6NCK2 446 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 ENPP3O14638 875 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 ZNF263O14978 683 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 OFD1O75665 1012 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 LCA5LO95447 670 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 TIMP1P01033 207 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 POMCP01189 267 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 WEE2P0C1S8 567 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 FGFR1P11362 822 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 P4HA1P13674 534 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 ITGB8P26012 769 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 ANXA13P27216 316 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 CLCN1P35523 988 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 PNPLA4P41247 253 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 TAF6P49848 677 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 PDE6CP51160 858 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 ZNF132P52740 706 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 YWHAEP62258 255 aaKnown RBP11.41□□□□□ -0.58
CPNE3-212ENST00000621783 GFPT1Q06210 699 aaPredicted RBP11.41□□□□□ -0.58
CPNE3-212ENST00000621783 SV2CQ496J9 727 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 CNKSR3Q6P9H4 555 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 GLB1LQ6UWU2 654 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 NOP9Q86U38 636 aaKnown RBP11.41□□□□□ -0.58
CPNE3-212ENST00000621783 SLC47A2Q86VL8 602 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 LNX1Q8TBB1 728 aaPredicted RBP11.41□□□□□ -0.58
CPNE3-212ENST00000621783 EPS8L1Q8TE68 723 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 SLC20A1Q8WUM9 679 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 TRIM43Q96BQ3 446 aaPredicted RBP11.41□□□□□ -0.58
CPNE3-212ENST00000621783 VWCEQ96DN2 955 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.41□□□□□ -0.58
CPNE3-212ENST00000621783 ELAC1Q9H777 363 aaKnown RBP11.41□□□□□ -0.58
CPNE3-212ENST00000621783 CYP3A43Q9HB55 503 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 ACP6Q9NPH0 428 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 CISHQ9NSE2 258 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 TRMT1Q9NXH9 659 aaKnown RBP11.41□□□□□ -0.58
CPNE3-212ENST00000621783 CACNG4Q9UBN1 327 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 BRCA2P51587 3418 aa11.41□□□□□ -0.58
CPNE3-212ENST00000621783 A0A087X0T9 212 aa11.4□□□□□ -0.58
CPNE3-212ENST00000621783 A0A0U1RQJ8 604 aa11.4□□□□□ -0.58
CPNE3-212ENST00000621783 CASTOR2A6NHX0 329 aa11.4□□□□□ -0.58
CPNE3-212ENST00000621783 DDX3XO00571 662 aaKnown RBP eCLIP11.4□□□□□ -0.58
CPNE3-212ENST00000621783 PODXLO00592 558 aa11.4□□□□□ -0.58
CPNE3-212ENST00000621783 SPTLC1O15269 473 aa11.4□□□□□ -0.58
CPNE3-212ENST00000621783 CCP110O43303 1012 aa11.4□□□□□ -0.58
CPNE3-212ENST00000621783 ZSCAN12O43309 604 aa11.4□□□□□ -0.58
CPNE3-212ENST00000621783 ZNF500O60304 480 aaPredicted RBP11.4□□□□□ -0.58
CPNE3-212ENST00000621783 IPO7O95373 1038 aaKnown RBP11.4□□□□□ -0.58
CPNE3-212ENST00000621783 CALCAP01258 141 aa11.4□□□□□ -0.58
CPNE3-212ENST00000621783 FAM228BP0C875 321 aa11.4□□□□□ -0.58
CPNE3-212ENST00000621783 CYP11B1P15538 503 aa11.4□□□□□ -0.58
CPNE3-212ENST00000621783 RAG1P15918 1043 aa11.4□□□□□ -0.58
CPNE3-212ENST00000621783 CDH8P55286 799 aa11.4□□□□□ -0.58
CPNE3-212ENST00000621783 CYP27A1Q02318 531 aa11.4□□□□□ -0.58
CPNE3-212ENST00000621783 SPA17Q15506 151 aa11.4□□□□□ -0.58
CPNE3-212ENST00000621783 SLC18A3Q16572 532 aa11.4□□□□□ -0.58
CPNE3-212ENST00000621783 NOMO2Q5JPE7 1267 aa11.4□□□□□ -0.58
CPNE3-212ENST00000621783 SMYD5Q6GMV2 418 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms