RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 PAXBP1Q9Y5B6 917 aa17.06■□□□□ 0.32
CBWD3-216ENST00000621396 SCN1AP35498 2009 aa17.05■□□□□ 0.32
CBWD3-216ENST00000621396 MACROD2A1Z1Q3 448 aa17.05■□□□□ 0.32
CBWD3-216ENST00000621396 COL6A1P12109 1028 aa17.05■□□□□ 0.32
CBWD3-216ENST00000621396 LRRC26Q2I0M4 334 aa17.05■□□□□ 0.32
CBWD3-216ENST00000621396 ARHGAP29Q52LW3 1261 aa17.05■□□□□ 0.32
CBWD3-216ENST00000621396 ZNF667Q5HYK9 610 aa17.05■□□□□ 0.32
CBWD3-216ENST00000621396 NYAP1Q6ZVC0 841 aa17.05■□□□□ 0.32
CBWD3-216ENST00000621396 WNT8AQ9H1J5 351 aa17.05■□□□□ 0.32
CBWD3-216ENST00000621396 PUF60Q9UHX1 559 aaKnown RBP17.05■□□□□ 0.32
CBWD3-216ENST00000621396 NAGPAQ9UK23 515 aa17.05■□□□□ 0.32
CBWD3-216ENST00000621396 MAGEA1P43355 309 aa17.05■□□□□ 0.32
CBWD3-216ENST00000621396 PKN2Q16513 984 aaKnown RBP17.05■□□□□ 0.32
CBWD3-216ENST00000621396 CCDC122Q5T0U0 273 aa17.05■□□□□ 0.32
CBWD3-216ENST00000621396 SYT10Q6XYQ8 523 aa17.05■□□□□ 0.32
CBWD3-216ENST00000621396 CD302Q8IX05 232 aa17.05■□□□□ 0.32
CBWD3-216ENST00000621396 PCDHB18PQ96TA0 734 aa17.05■□□□□ 0.32
CBWD3-216ENST00000621396 CHORDC1Q9UHD1 332 aaPredicted RBP17.05■□□□□ 0.32
CBWD3-216ENST00000621396 SALL4Q9UJQ4 1053 aa17.05■□□□□ 0.32
CBWD3-216ENST00000621396 ITGA11Q9UKX5 1188 aa17.05■□□□□ 0.32
CBWD3-216ENST00000621396 SNX9Q9Y5X1 595 aa17.05■□□□□ 0.32
CBWD3-216ENST00000621396 DCDC2CA8MYV0 355 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 SPTLC1O15269 473 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 FGFR1P11362 822 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 CHRNB2P17787 502 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 KRT83P78385 493 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 RBP5P82980 135 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 BFSP2Q13515 415 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 C9orf57Q5W0N0 161 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 ALKBH5Q6P6C2 394 aaKnown RBP17.04■□□□□ 0.32
CBWD3-216ENST00000621396 ANKRD33Q7Z3H0 272 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 BEST2Q8NFU1 509 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 AGPAT1Q99943 283 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 SYT11Q9BT88 431 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 KCND1Q9NSA2 647 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 NOCTQ9UK39 431 aaKnown RBP17.04■□□□□ 0.32
CBWD3-216ENST00000621396 BZW2Q9Y6E2 419 aaKnown RBP17.04■□□□□ 0.32
CBWD3-216ENST00000621396 CASTOR2A6NHX0 329 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 HCRTO43612 131 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 CAND2O75155 1236 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 POU5F1Q01860 360 aaKnown RBP17.04■□□□□ 0.32
CBWD3-216ENST00000621396 PAN2Q504Q3 1202 aaKnown RBP17.04■□□□□ 0.32
CBWD3-216ENST00000621396 C2CD6Q53TS8 623 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 XKR4Q5GH76 650 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 PASD1Q8IV76 773 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 USP38Q8NB14 1042 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 RBBP8NLQ8NC74 664 aaPredicted RBP17.04■□□□□ 0.32
CBWD3-216ENST00000621396 JAKMIP2Q96AA8 810 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 WDR24Q96S15 920 aa17.04■□□□□ 0.32
CBWD3-216ENST00000621396 UBQLN1Q9UMX0 589 aaKnown RBP17.04■□□□□ 0.32
CBWD3-216ENST00000621396 LCA5LO95447 670 aa17.03■□□□□ 0.32
CBWD3-216ENST00000621396 ABCB4P21439 1286 aa17.03■□□□□ 0.32
CBWD3-216ENST00000621396 TNFAIP3P21580 790 aa17.03■□□□□ 0.32
CBWD3-216ENST00000621396 TBXAS1P24557 533 aaPredicted RBP17.03■□□□□ 0.32
CBWD3-216ENST00000621396 ITGB8P26012 769 aa17.03■□□□□ 0.32
CBWD3-216ENST00000621396 ENOSF1Q7L5Y1 443 aa17.03■□□□□ 0.32
CBWD3-216ENST00000621396 PPP1R10Q96QC0 940 aaKnown RBP17.03■□□□□ 0.32
CBWD3-216ENST00000621396 TWNKQ96RR1 684 aa17.03■□□□□ 0.32
CBWD3-216ENST00000621396 RPS6KC1Q96S38 1066 aa17.03■□□□□ 0.32
CBWD3-216ENST00000621396 RSAD1Q9HA92 442 aa17.03■□□□□ 0.32
CBWD3-216ENST00000621396 PRDM5Q9NQX1 630 aaPredicted RBP17.03■□□□□ 0.32
CBWD3-216ENST00000621396 KCNE1P15382 129 aa17.02■□□□□ 0.32
CBWD3-216ENST00000621396 PDE6CP51160 858 aa17.02■□□□□ 0.32
CBWD3-216ENST00000621396 CLCNKBP51801 687 aa17.02■□□□□ 0.32
CBWD3-216ENST00000621396 GNG11P61952 73 aa17.02■□□□□ 0.32
CBWD3-216ENST00000621396 DPH6Q7L8W6 267 aa17.02■□□□□ 0.32
CBWD3-216ENST00000621396 ECHDC2Q86YB7 292 aa17.02■□□□□ 0.32
CBWD3-216ENST00000621396 SLC30A5Q8TAD4 765 aa17.02■□□□□ 0.32
CBWD3-216ENST00000621396 DDX1Q92499 740 aaKnown RBP17.02■□□□□ 0.32
CBWD3-216ENST00000621396 SCN5AQ14524 2016 aa17.02■□□□□ 0.32
CBWD3-216ENST00000621396 F8W810 466 aa17.02■□□□□ 0.32
CBWD3-216ENST00000621396 TLR3O15455 904 aaKnown RBP17.02■□□□□ 0.32
CBWD3-216ENST00000621396 BUB1O43683 1085 aa17.02■□□□□ 0.32
CBWD3-216ENST00000621396 THP07101 528 aa17.02■□□□□ 0.32
CBWD3-216ENST00000621396 EN2P19622 333 aaPredicted RBP17.02■□□□□ 0.32
CBWD3-216ENST00000621396 VAV2P52735 878 aa17.02■□□□□ 0.32
CBWD3-216ENST00000621396 FMO1Q01740 532 aa17.02■□□□□ 0.32
CBWD3-216ENST00000621396 HASPINQ8TF76 798 aa17.02■□□□□ 0.32
CBWD3-216ENST00000621396 MCOLN1Q9GZU1 580 aa17.02■□□□□ 0.32
CBWD3-216ENST00000621396 C11orf49Q9H6J7 331 aa17.02■□□□□ 0.32
CBWD3-216ENST00000621396 RGS18Q9NS28 235 aa17.02■□□□□ 0.32
CBWD3-216ENST00000621396 TMEM39AQ9NV64 488 aa17.02■□□□□ 0.32
CBWD3-216ENST00000621396 DNAI1Q9UI46 699 aa17.02■□□□□ 0.32
CBWD3-216ENST00000621396 PITPNM1O00562 1244 aa17.01■□□□□ 0.31
CBWD3-216ENST00000621396 CCDC172P0C7W6 258 aa17.01■□□□□ 0.31
CBWD3-216ENST00000621396 GNA15P30679 374 aa17.01■□□□□ 0.31
CBWD3-216ENST00000621396 BMS1Q14692 1282 aaKnown RBP17.01■□□□□ 0.31
CBWD3-216ENST00000621396 NT5DC4Q86YG4 428 aa17.01■□□□□ 0.31
CBWD3-216ENST00000621396 ZSWIM1Q9BR11 485 aa17.01■□□□□ 0.31
CBWD3-216ENST00000621396 TMEM106CQ9BVX2 250 aa17.01■□□□□ 0.31
CBWD3-216ENST00000621396 DERAQ9Y315 318 aa17.01■□□□□ 0.31
CBWD3-216ENST00000621396 C9IYK1 514 aa17.01■□□□□ 0.31
CBWD3-216ENST00000621396 ZNF623O75123 536 aa17.01■□□□□ 0.31
CBWD3-216ENST00000621396 BRD2P25440 801 aaKnown RBP17.01■□□□□ 0.31
CBWD3-216ENST00000621396 GATMP50440 423 aa17.01■□□□□ 0.31
CBWD3-216ENST00000621396 TNNC1P63316 161 aa17.01■□□□□ 0.31
CBWD3-216ENST00000621396 MYO1EQ12965 1108 aa17.01■□□□□ 0.31
CBWD3-216ENST00000621396 NAB2Q15742 525 aa17.01■□□□□ 0.31
CBWD3-216ENST00000621396 PLEKHG4Q58EX7 1191 aa17.01■□□□□ 0.31
CBWD3-216ENST00000621396 SLC24A5Q71RS6 500 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms