RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 PDCLQ13371 301 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 MORF4L2Q15014 288 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 KIZQ2M2Z5 673 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 DCAF6Q58WW2 860 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 ITIH5Q86UX2 942 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 CD302Q8IX05 232 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 NR1H4Q96RI1 486 aaPredicted RBP10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 TARS2Q9BW92 718 aaKnown RBP10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 EMILIN2Q9BXX0 1053 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 TRIM4Q9C037 500 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 SPATC1LQ9H0A9 340 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 FAM96AQ9H5X1 160 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 ABHD10Q9NUJ1 306 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 KANSL3Q9P2N6 904 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 PPP1R9AQ9ULJ8 1098 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 SPDYE5A6NIY4 337 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 TBKBP1A7MCY6 615 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 EXTL3O43909 919 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 LZTS3O60299 673 aaPredicted RBP10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 TLR2O60603 784 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 E2F6O75461 281 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 SLC26A2P50443 739 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 SLC7A5Q01650 507 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 SPDYE7PQ495Y7 208 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 SRLQ86TD4 932 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 HS6ST3Q8IZP7 471 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 KCTD17Q8N5Z5 321 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 PDCD7Q8N8D1 485 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 FBXO32Q969P5 355 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 AGPAT1Q99943 283 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 SENP7Q9BQF6 1050 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 ADM5C9JUS6 153 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 GFAPP14136 432 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 KLRC2P26717 231 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 NPEPPSP55786 919 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 EIF3EP60228 445 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 PDAP1Q13442 181 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 GLRA4Q5JXX5 417 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 ASPSCR1Q9BZE9 553 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 NIF3L1Q9GZT8 377 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 EPC1Q9H2F5 836 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 NOVA2Q9UNW9 492 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 ADGRG1Q9Y653 693 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 FAM47DPA6NHR8 397 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 SNRPFP62306 86 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 PTPAQ15257 358 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 MTFR1Q15390 333 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 PHKG1Q16816 387 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 FAM83AQ86UY5 434 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 TRIM59Q8IWR1 403 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 SAMD3Q8N6K7 520 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 AGAP3Q96P47 875 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 MRPL46Q9H2W6 279 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 DSEQ9UL01 958 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 SUFUQ9UMX1 484 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 PACSIN2Q9UNF0 486 aaPredicted RBP10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 EIF3DO15371 548 aaKnown RBP eCLIP10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 DDHD2O94830 711 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 TYK2P29597 1187 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 SLC1A1P43005 524 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 KPNA1P52294 538 aaPredicted RBP10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 RASIP1Q5U651 963 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 E4F1Q66K89 784 aaPredicted RBP10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 PKN3Q6P5Z2 889 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 SKA1Q96BD8 255 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 CCSER1Q9C0I3 900 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 C17orf75Q9HAS0 396 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 DPP3Q9NY33 737 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 ZFATQ9P243 1243 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 NFU1Q9UMS0 254 aa10.28□□□□□ -0.76
CLTCL1-211ENST00000621271 MSCO60682 206 aa10.27□□□□□ -0.76
CLTCL1-211ENST00000621271 THP07101 528 aa10.27□□□□□ -0.76
CLTCL1-211ENST00000621271 MYL4P12829 197 aa10.27□□□□□ -0.76
CLTCL1-211ENST00000621271 CLCN3P51790 818 aa10.27□□□□□ -0.76
CLTCL1-211ENST00000621271 NFIAQ12857 509 aa10.27□□□□□ -0.76
CLTCL1-211ENST00000621271 NOGQ13253 232 aa10.27□□□□□ -0.76
CLTCL1-211ENST00000621271 GOLGA7BQ2TAP0 167 aa10.27□□□□□ -0.76
CLTCL1-211ENST00000621271 P3H1Q32P28 736 aa10.27□□□□□ -0.76
CLTCL1-211ENST00000621271 TRMT10CQ7L0Y3 403 aaKnown RBP10.27□□□□□ -0.76
CLTCL1-211ENST00000621271 LCA5Q86VQ0 697 aa10.27□□□□□ -0.76
CLTCL1-211ENST00000621271 NPM3O75607 178 aaKnown RBP10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 KRT14P02533 472 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 ITGB3P05106 788 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 SMAD1Q15797 465 aaKnown RBP10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 FSCBQ5H9T9 825 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 RABGAP1LQ5R372 815 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 PTRHD1Q6GMV3 140 aaKnown RBP10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 CDR2LQ86X02 465 aaPredicted RBP10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 DDIASQ8IXT1 998 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 RIN2Q8WYP3 895 aaPredicted RBP10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 USP13Q92995 863 aaPredicted RBP10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 CINPQ9BW66 212 aaPredicted RBP10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 IGFLR1Q9H665 355 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 APOBEC2Q9Y235 224 aaKnown RBP10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 KCNN4O15554 427 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 RTN2O75298 545 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 HLA-DRAP01903 254 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 KLRC1P26715 233 aa10.27□□□□□ -0.77
CLTCL1-211ENST00000621271 HMOX2P30519 316 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms