RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 BECN2A8MW95 431 aa17.49■□□□□ 0.39
CD40-207ENST00000620709 CLDN3O15551 220 aa17.49■□□□□ 0.39
CD40-207ENST00000620709 TOM1L1O75674 476 aa17.49■□□□□ 0.39
CD40-207ENST00000620709 RPN1P04843 607 aaKnown RBP17.49■□□□□ 0.39
CD40-207ENST00000620709 MCM6Q14566 821 aa17.49■□□□□ 0.39
CD40-207ENST00000620709 CCDC47Q96A33 483 aaKnown RBP17.49■□□□□ 0.39
CD40-207ENST00000620709 NTPCRQ9BSD7 190 aaKnown RBP17.49■□□□□ 0.39
CD40-207ENST00000620709 TRIM9Q9C026 710 aa17.49■□□□□ 0.39
CD40-207ENST00000620709 IRF2BPLQ9H1B7 796 aa17.49■□□□□ 0.39
CD40-207ENST00000620709 LARSQ9P2J5 1176 aaKnown RBP17.49■□□□□ 0.39
CD40-207ENST00000620709 ABLIM1O14639 778 aa17.48■□□□□ 0.39
CD40-207ENST00000620709 FAM13AO94988 1023 aa17.48■□□□□ 0.39
CD40-207ENST00000620709 KCNE1P15382 129 aa17.48■□□□□ 0.39
CD40-207ENST00000620709 CLCN5P51795 746 aa17.48■□□□□ 0.39
CD40-207ENST00000620709 SPAG1Q07617 926 aa17.48■□□□□ 0.39
CD40-207ENST00000620709 KCNB1Q14721 858 aa17.48■□□□□ 0.39
CD40-207ENST00000620709 IQCB1Q15051 598 aa17.48■□□□□ 0.39
CD40-207ENST00000620709 ARSHQ5FYA8 562 aa17.48■□□□□ 0.39
CD40-207ENST00000620709 XKR4Q5GH76 650 aa17.48■□□□□ 0.39
CD40-207ENST00000620709 MYCT1Q8N699 235 aa17.48■□□□□ 0.39
CD40-207ENST00000620709 DOCK8Q8NF50 2099 aa17.48■□□□□ 0.39
CD40-207ENST00000620709 REEP2Q9BRK0 252 aa17.48■□□□□ 0.39
CD40-207ENST00000620709 HCFC1R1Q9NWW0 138 aa17.48■□□□□ 0.39
CD40-207ENST00000620709 KCND2Q9NZV8 630 aa17.48■□□□□ 0.39
CD40-207ENST00000620709 CNTN3Q9P232 1028 aa17.48■□□□□ 0.39
CD40-207ENST00000620709 GOLGA6L19H0YKK7 550 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 K7ENM7 598 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 PI15O43692 258 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 CXCL8P10145 99 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 BMP6P22004 513 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 ELF1P32519 619 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 LIG4P49917 911 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 ASIC1P78348 528 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 VARS2Q5ST30 1063 aaKnown RBP17.47■□□□□ 0.39
CD40-207ENST00000620709 CWF19L1Q69YN2 538 aaKnown RBP17.47■□□□□ 0.39
CD40-207ENST00000620709 HAUS6Q7Z4H7 955 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 NXPE3Q969Y0 559 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 BACE2Q9Y5Z0 518 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 NUMBLQ9Y6R0 609 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 H0YCG3 227 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 PRRG1O14668 218 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 NPR3P17342 541 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 RPL9P32969 192 aaKnown RBP17.47■□□□□ 0.39
CD40-207ENST00000620709 NUBP1P53384 320 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 NCKAP1LP55160 1127 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 SLC10A6Q3KNW5 377 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 CT47A1Q5JQC4 288 aaPredicted RBP17.47■□□□□ 0.39
CD40-207ENST00000620709 CNNM4Q6P4Q7 775 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 ZPBP2Q6X784 338 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 TMEM130Q8N3G9 435 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 AOPEPQ8N6M6 819 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 ITFG1Q8TB96 612 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 GPR152Q8TDT2 470 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 ING5Q8WYH8 240 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 GTPBP4Q9BZE4 634 aaKnown RBP17.47■□□□□ 0.39
CD40-207ENST00000620709 TUBGCP4Q9UGJ1 667 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 CDH7Q9ULB5 785 aa17.47■□□□□ 0.39
CD40-207ENST00000620709 SMTNL1A8MU46 457 aa17.46■□□□□ 0.39
CD40-207ENST00000620709 H7C4K7 107 aa17.46■□□□□ 0.39
CD40-207ENST00000620709 MEFVO15553 781 aaPredicted RBP17.46■□□□□ 0.39
CD40-207ENST00000620709 KLRC4O43908 158 aa17.46■□□□□ 0.39
CD40-207ENST00000620709 PAPLNO95428 1278 aa17.46■□□□□ 0.39
CD40-207ENST00000620709 LRG1P02750 347 aa17.46■□□□□ 0.39
CD40-207ENST00000620709 SRFP11831 508 aa17.46■□□□□ 0.39
CD40-207ENST00000620709 HOXA9P31269 272 aa17.46■□□□□ 0.39
CD40-207ENST00000620709 ROR1Q01973 937 aa17.46■□□□□ 0.39
CD40-207ENST00000620709 HTR4Q13639 388 aa17.46■□□□□ 0.39
CD40-207ENST00000620709 KMT5BQ4FZB7 885 aa17.46■□□□□ 0.39
CD40-207ENST00000620709 CTXN3Q4LDR2 81 aa17.46■□□□□ 0.39
CD40-207ENST00000620709 PABPC1LQ4VXU2 614 aaKnown RBP17.46■□□□□ 0.39
CD40-207ENST00000620709 ZNF658Q5TYW1 1059 aaPredicted RBP17.46■□□□□ 0.39
CD40-207ENST00000620709 DHX40Q8IX18 779 aaKnown RBP17.46■□□□□ 0.39
CD40-207ENST00000620709 FGF13Q92913 245 aa17.46■□□□□ 0.39
CD40-207ENST00000620709 FAM212AQ96EL1 285 aa17.46■□□□□ 0.39
CD40-207ENST00000620709 KIF12Q96FN5 646 aa17.46■□□□□ 0.39
CD40-207ENST00000620709 HAPLN2Q9GZV7 340 aa17.46■□□□□ 0.39
CD40-207ENST00000620709 EXOC1Q9NV70 894 aa17.46■□□□□ 0.39
CD40-207ENST00000620709 WNT16Q9UBV4 365 aa17.46■□□□□ 0.39
CD40-207ENST00000620709 ODF2LQ9ULJ1 636 aa17.46■□□□□ 0.39
CD40-207ENST00000620709 ZFP37Q9Y6Q3 630 aaPredicted RBP17.46■□□□□ 0.39
CD40-207ENST00000620709 PVALEFA0A1B0GWK0 134 aa17.45■□□□□ 0.38
CD40-207ENST00000620709 KRBA1A5PL33 1030 aa17.45■□□□□ 0.38
CD40-207ENST00000620709 MYMKA6NI61 221 aa17.45■□□□□ 0.38
CD40-207ENST00000620709 TULP1O00294 542 aaPredicted RBP17.45■□□□□ 0.38
CD40-207ENST00000620709 IKBKBO14920 756 aa17.45■□□□□ 0.38
CD40-207ENST00000620709 HNRNPDLO14979 420 aaKnown RBP17.45■□□□□ 0.38
CD40-207ENST00000620709 TBCAO75347 108 aaKnown RBP17.45■□□□□ 0.38
CD40-207ENST00000620709 RHOBTB3O94955 611 aa17.45■□□□□ 0.38
CD40-207ENST00000620709 CLTAP09496 248 aa17.45■□□□□ 0.38
CD40-207ENST00000620709 AOC1P19801 751 aa17.45■□□□□ 0.38
CD40-207ENST00000620709 TNFSF9P41273 254 aa17.45■□□□□ 0.38
CD40-207ENST00000620709 TPM4P67936 248 aa17.45■□□□□ 0.38
CD40-207ENST00000620709 MCL1Q07820 350 aa17.45■□□□□ 0.38
CD40-207ENST00000620709 PARM1Q6UWI2 310 aa17.45■□□□□ 0.38
CD40-207ENST00000620709 FGF14Q92915 247 aa17.45■□□□□ 0.38
CD40-207ENST00000620709 RPP25Q9BUL9 199 aaKnown RBP17.45■□□□□ 0.38
CD40-207ENST00000620709 PARVGQ9HBI0 331 aa17.45■□□□□ 0.38
CD40-207ENST00000620709 CYP4F11Q9HBI6 524 aa17.45■□□□□ 0.38
CD40-207ENST00000620709 DNMT3BQ9UBC3 853 aaKnown RBP17.45■□□□□ 0.38
CD40-207ENST00000620709 MRPS23Q9Y3D9 190 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms