RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 MYO15AQ9UKN7 3530 aa12.95□□□□□ -0.34
UPF3B-204ENST00000619445 A0A0B4J269 797 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 FGF19O95750 216 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 DCNP07585 359 aaKnown RBP12.94□□□□□ -0.34
UPF3B-204ENST00000619445 ODC1P11926 461 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 PLCG1P19174 1290 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 IGFBP6P24592 240 aaPredicted RBP12.94□□□□□ -0.34
UPF3B-204ENST00000619445 EPHA5P54756 1037 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 GTF2BQ00403 316 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 SNW1Q13573 536 aaKnown RBP12.94□□□□□ -0.34
UPF3B-204ENST00000619445 MYBPC2Q14324 1141 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 PRSS36Q5K4E3 855 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 SPECC1Q5M775 1068 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 ZBTB41Q5SVQ8 909 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 C1orf228Q6PIY5 440 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 DSTYKQ6XUX3 929 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 MAP4K3Q8IVH8 894 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 KCNG4Q8TDN1 519 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 DEPDC1BQ8WUY9 529 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 ING5Q8WYH8 240 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 IRF7Q92985 503 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 MCRS1Q96EZ8 462 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 KXD1Q9BQD3 176 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 MSTO1Q9BUK6 570 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 ASB7Q9H672 318 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 TRPV5Q9NQA5 729 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 SEL1LQ9UBV2 794 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 STK17AQ9UEE5 414 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 TUBGCP4Q9UGJ1 667 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 DSEQ9UL01 958 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 OTOGLQ3ZCN5 2332 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 LAMTOR5O43504 91 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 GLULP15104 373 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 CEBPBP17676 345 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 DDIT3P35638 169 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 RPS9P46781 194 aaKnown RBP12.94□□□□□ -0.34
UPF3B-204ENST00000619445 ALDH1A3P47895 512 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 EPHB3P54753 998 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 TWF1Q12792 350 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 SMARCB1Q12824 385 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 GPR17Q13304 367 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 UBXN2BQ14CS0 331 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 POSTNQ15063 836 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 SF3A1Q15459 793 aaKnown RBP12.94□□□□□ -0.34
UPF3B-204ENST00000619445 ENOX2Q16206 610 aaKnown RBP12.94□□□□□ -0.34
UPF3B-204ENST00000619445 SLC5A9Q2M3M2 681 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 SPATA1Q5VX52 437 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 ARMCX5Q6P1M9 558 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 NT5DC4Q86YG4 428 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 ADSSL1Q8N142 457 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 SMARCD2Q92925 531 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 MSANTD3Q96H12 275 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 TRMT61BQ9BVS5 477 aaKnown RBP12.94□□□□□ -0.34
UPF3B-204ENST00000619445 FOXQ1Q9C009 403 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 ZHX3Q9H4I2 956 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 BRD9Q9H8M2 597 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 TRPV4Q9HBA0 871 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 LTB4R2Q9NPC1 389 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 BLOC1S4Q9NUP1 217 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 C2CD2Q9Y426 696 aa12.94□□□□□ -0.34
UPF3B-204ENST00000619445 NPHP3-ACAD11A0A0J9YXS1 232 aa12.93□□□□□ -0.34
UPF3B-204ENST00000619445 FAM170BA6NMN3 283 aa12.93□□□□□ -0.34
UPF3B-204ENST00000619445 LACTBL1A8MY62 500 aa12.93□□□□□ -0.34
UPF3B-204ENST00000619445 SPTLC1O15269 473 aa12.93□□□□□ -0.34
UPF3B-204ENST00000619445 MEFVO15553 781 aaPredicted RBP12.93□□□□□ -0.34
UPF3B-204ENST00000619445 FAM189A1O60320 539 aa12.93□□□□□ -0.34
UPF3B-204ENST00000619445 SEC24AO95486 1093 aa12.93□□□□□ -0.34
UPF3B-204ENST00000619445 SP9P0CG40 484 aa12.93□□□□□ -0.34
UPF3B-204ENST00000619445 PSMC3P17980 439 aa12.93□□□□□ -0.34
UPF3B-204ENST00000619445 MLLT6P55198 1093 aaPredicted RBP12.93□□□□□ -0.34
UPF3B-204ENST00000619445 CACNB1Q02641 598 aaPredicted RBP12.93□□□□□ -0.34
UPF3B-204ENST00000619445 DHX8Q14562 1220 aaKnown RBP12.93□□□□□ -0.34
UPF3B-204ENST00000619445 MCM6Q14566 821 aa12.93□□□□□ -0.34
UPF3B-204ENST00000619445 PPP2R5DQ14738 602 aa12.93□□□□□ -0.34
UPF3B-204ENST00000619445 TMEM132DQ14C87 1099 aa12.93□□□□□ -0.34
UPF3B-204ENST00000619445 SEZ6Q53EL9 994 aa12.93□□□□□ -0.34
UPF3B-204ENST00000619445 OVOS1Q6IE37 1185 aa12.93□□□□□ -0.34
UPF3B-204ENST00000619445 TPRG1Q6ZUI0 275 aa12.93□□□□□ -0.34
UPF3B-204ENST00000619445 ITIH5Q86UX2 942 aa12.93□□□□□ -0.34
UPF3B-204ENST00000619445 CLDN23Q96B33 292 aa12.93□□□□□ -0.34
UPF3B-204ENST00000619445 ASB16Q96NS5 453 aa12.93□□□□□ -0.34
UPF3B-204ENST00000619445 FAM126AQ9BYI3 521 aaPredicted RBP12.93□□□□□ -0.34
UPF3B-204ENST00000619445 SPATA6Q9NWH7 488 aaPredicted RBP12.93□□□□□ -0.34
UPF3B-204ENST00000619445 ZMYM5Q9UJ78 669 aa12.93□□□□□ -0.34
UPF3B-204ENST00000619445 CPSF3Q9UKF6 684 aaKnown RBP12.93□□□□□ -0.34
UPF3B-204ENST00000619445 EXOC7Q9UPT5 735 aa12.93□□□□□ -0.34
UPF3B-204ENST00000619445 VPS37CA5D8V6 355 aaPredicted RBP12.92□□□□□ -0.34
UPF3B-204ENST00000619445 KINO60870 393 aaKnown RBP12.92□□□□□ -0.34
UPF3B-204ENST00000619445 CD2BP2O95400 341 aaKnown RBP12.92□□□□□ -0.34
UPF3B-204ENST00000619445 GAP43P17677 238 aa12.92□□□□□ -0.34
UPF3B-204ENST00000619445 TNFSF9P41273 254 aa12.92□□□□□ -0.34
UPF3B-204ENST00000619445 TUFMP49411 452 aaKnown RBP12.92□□□□□ -0.34
UPF3B-204ENST00000619445 LILRA4P59901 499 aa12.92□□□□□ -0.34
UPF3B-204ENST00000619445 CUL4AQ13619 759 aa12.92□□□□□ -0.34
UPF3B-204ENST00000619445 ALCAMQ13740 583 aa12.92□□□□□ -0.34
UPF3B-204ENST00000619445 KARSQ15046 597 aaKnown RBP12.92□□□□□ -0.34
UPF3B-204ENST00000619445 FAM78AQ5JUQ0 283 aa12.92□□□□□ -0.34
UPF3B-204ENST00000619445 ADALQ6DHV7 355 aa12.92□□□□□ -0.34
UPF3B-204ENST00000619445 TANGO2Q6ICL3 276 aa12.92□□□□□ -0.34
UPF3B-204ENST00000619445 RNF19BQ6ZMZ0 732 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms