RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 AGPAT3Q9NRZ7 376 aa23.17■■□□□ 1.3
SGMS1-210ENST00000619438 LARSQ9P2J5 1176 aaKnown RBP23.17■■□□□ 1.3
SGMS1-210ENST00000619438 KCNG1Q9UIX4 513 aa23.17■■□□□ 1.3
SGMS1-210ENST00000619438 A0A1B0GUA9 196 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 SPDYE4A6NLX3 237 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 ITGA4P13612 1032 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 NPTX2P47972 431 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 RNASELQ05823 741 aaKnown RBP23.16■■□□□ 1.3
SGMS1-210ENST00000619438 SLC27A1Q6PCB7 646 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 MRPL10Q7Z7H8 261 aaKnown RBP23.16■■□□□ 1.3
SGMS1-210ENST00000619438 THNSL1Q8IYQ7 743 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 HACE1Q8IYU2 909 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 HNRNPLLQ8WVV9 542 aaKnown RBP23.16■■□□□ 1.3
SGMS1-210ENST00000619438 ANKZF1Q9H8Y5 726 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 PRDM6Q9NQX0 595 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 HCSTQ9UBK5 93 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 FHOD1Q9Y613 1164 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 ATP8B3O60423 1300 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 MYH11P35749 1972 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 KIAA1671Q9BY89 1806 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 MACROD2A1Z1Q3 448 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 MEIS3P2A8K0S8 358 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 ACKR2O00590 384 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 ENC1O14682 589 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 GRM6O15303 877 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 CSPG5O95196 566 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 LAG3P18627 525 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 SLC9A1P19634 815 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 PRKCIP41743 596 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 SMTNP53814 917 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 GFPT1Q06210 699 aaPredicted RBP23.16■■□□□ 1.3
SGMS1-210ENST00000619438 FAM187BQ17R55 369 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 C10orf76Q5T2E6 689 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 CC2D1AQ6P1N0 951 aaPredicted RBP23.16■■□□□ 1.3
SGMS1-210ENST00000619438 C12orf56Q8IXR9 622 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 RSPH1Q8WYR4 309 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 ALS2CR12Q96Q35 445 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 CWH43Q9H720 699 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 TMEM206Q9H813 350 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 RSAD1Q9HA92 442 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 SIX2Q9NPC8 291 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 UBN1Q9NPG3 1134 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 IPPQ9Y573 584 aa23.16■■□□□ 1.3
SGMS1-210ENST00000619438 SNRPFP62306 86 aaKnown RBP23.15■■□□□ 1.3
SGMS1-210ENST00000619438 CBX1P83916 185 aa23.15■■□□□ 1.3
SGMS1-210ENST00000619438 KLHL30Q0D2K2 578 aa23.15■■□□□ 1.3
SGMS1-210ENST00000619438 RAPGEF1Q13905 1077 aa23.15■■□□□ 1.3
SGMS1-210ENST00000619438 DCAF17Q5H9S7 520 aaPredicted RBP23.15■■□□□ 1.3
SGMS1-210ENST00000619438 NOMO2Q5JPE7 1267 aa23.15■■□□□ 1.3
SGMS1-210ENST00000619438 IRF2BP2Q7Z5L9 587 aa23.15■■□□□ 1.3
SGMS1-210ENST00000619438 KRT222Q8N1A0 295 aa23.15■■□□□ 1.3
SGMS1-210ENST00000619438 URGCPQ8TCY9 931 aa23.15■■□□□ 1.3
SGMS1-210ENST00000619438 APOL6Q9BWW8 343 aa23.15■■□□□ 1.3
SGMS1-210ENST00000619438 EPC1Q9H2F5 836 aa23.15■■□□□ 1.3
SGMS1-210ENST00000619438 FNDC1Q4ZHG4 1894 aaPredicted RBP23.15■■□□□ 1.3
SGMS1-210ENST00000619438 NPTXRO95502 500 aa23.14■■□□□ 1.29
SGMS1-210ENST00000619438 ALDH7A1P49419 539 aaKnown RBP23.14■■□□□ 1.29
SGMS1-210ENST00000619438 AGMOQ6ZNB7 445 aa23.14■■□□□ 1.29
SGMS1-210ENST00000619438 COLGALT1Q8NBJ5 622 aa23.14■■□□□ 1.29
SGMS1-210ENST00000619438 SMG8Q8ND04 991 aaKnown RBP23.14■■□□□ 1.29
SGMS1-210ENST00000619438 ADPGKQ9BRR6 497 aa23.14■■□□□ 1.29
SGMS1-210ENST00000619438 LMAN2LQ9H0V9 348 aa23.14■■□□□ 1.29
SGMS1-210ENST00000619438 ARFGAP3Q9NP61 516 aa23.14■■□□□ 1.29
SGMS1-210ENST00000619438 USP20Q9Y2K6 914 aa23.14■■□□□ 1.29
SGMS1-210ENST00000619438 FRMD4BQ9Y2L6 1034 aa23.14■■□□□ 1.29
SGMS1-210ENST00000619438 HES2Q9Y543 173 aa23.14■■□□□ 1.29
SGMS1-210ENST00000619438 BTNL10A8MVZ5 291 aa23.13■■□□□ 1.29
SGMS1-210ENST00000619438 ITGB1P05556 798 aa23.13■■□□□ 1.29
SGMS1-210ENST00000619438 PNMA6AP0CW24 399 aaPredicted RBP23.13■■□□□ 1.29
SGMS1-210ENST00000619438 PLS3P13797 630 aa23.13■■□□□ 1.29
SGMS1-210ENST00000619438 JAM2P57087 298 aa23.13■■□□□ 1.29
SGMS1-210ENST00000619438 APBA1Q02410 837 aa23.13■■□□□ 1.29
SGMS1-210ENST00000619438 TCERG1LQ5VWI1 586 aa23.13■■□□□ 1.29
SGMS1-210ENST00000619438 KCNT2Q6UVM3 1135 aa23.13■■□□□ 1.29
SGMS1-210ENST00000619438 ZNF558Q96NG5 402 aa23.13■■□□□ 1.29
SGMS1-210ENST00000619438 CCDC113Q9H0I3 377 aa23.13■■□□□ 1.29
SGMS1-210ENST00000619438 KANSL3Q9P2N6 904 aa23.13■■□□□ 1.29
SGMS1-210ENST00000619438 SNX12Q9UMY4 172 aa23.13■■□□□ 1.29
SGMS1-210ENST00000619438 CAPN6Q9Y6Q1 641 aa23.13■■□□□ 1.29
SGMS1-210ENST00000619438 CNTNAP2Q9UHC6 1331 aa23.13■■□□□ 1.29
SGMS1-210ENST00000619438 SLC16A4O15374 487 aa23.13■■□□□ 1.29
SGMS1-210ENST00000619438 ZNF572Q7Z3I7 529 aaPredicted RBP23.13■■□□□ 1.29
SGMS1-210ENST00000619438 SPPL3Q8TCT6 385 aa23.13■■□□□ 1.29
SGMS1-210ENST00000619438 POF1BQ8WVV4 589 aa23.13■■□□□ 1.29
SGMS1-210ENST00000619438 NOX5Q96PH1 765 aa23.13■■□□□ 1.29
SGMS1-210ENST00000619438 FAM193BQ96PV7 902 aaPredicted RBP23.13■■□□□ 1.29
SGMS1-210ENST00000619438 RNF39Q9H2S5 420 aa23.13■■□□□ 1.29
SGMS1-210ENST00000619438 TTLL13PA6NNM8 815 aa23.12■■□□□ 1.29
SGMS1-210ENST00000619438 FGF18O76093 207 aa23.12■■□□□ 1.29
SGMS1-210ENST00000619438 MCCD1P59942 119 aaPredicted RBP23.12■■□□□ 1.29
SGMS1-210ENST00000619438 KRT17Q04695 432 aa23.12■■□□□ 1.29
SGMS1-210ENST00000619438 ITIH3Q06033 890 aa23.12■■□□□ 1.29
SGMS1-210ENST00000619438 MICAL1Q8TDZ2 1067 aa23.12■■□□□ 1.29
SGMS1-210ENST00000619438 ACCSQ96QU6 501 aa23.12■■□□□ 1.29
SGMS1-210ENST00000619438 SPAG5Q96R06 1193 aa23.12■■□□□ 1.29
SGMS1-210ENST00000619438 NTPCRQ9BSD7 190 aaKnown RBP23.12■■□□□ 1.29
SGMS1-210ENST00000619438 TMEM134Q9H6X4 195 aa23.12■■□□□ 1.29
SGMS1-210ENST00000619438 TBC1D13Q9NVG8 400 aa23.12■■□□□ 1.29
SGMS1-210ENST00000619438 GCNT4Q9P109 453 aa23.12■■□□□ 1.29
SGMS1-210ENST00000619438 PARP2Q9UGN5 583 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms