RNA–Protein interactions for RNA: ENST00000619290.4

CYFIP1-210, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-210ENST00000619290 PDIA3P30101 505 aaKnown RBP13.5□□□□□ -0.25
CYFIP1-210ENST00000619290 CACNB1Q02641 598 aaPredicted RBP13.5□□□□□ -0.25
CYFIP1-210ENST00000619290 SOX4Q06945 474 aaPredicted RBP13.5□□□□□ -0.25
CYFIP1-210ENST00000619290 TNK2Q07912 1038 aa13.5□□□□□ -0.25
CYFIP1-210ENST00000619290 MRPL58Q14197 206 aaKnown RBP13.5□□□□□ -0.25
CYFIP1-210ENST00000619290 ELF2Q15723 593 aa13.5□□□□□ -0.25
CYFIP1-210ENST00000619290 MAPK6Q16659 721 aa13.5□□□□□ -0.25
CYFIP1-210ENST00000619290 DCAF4L1Q3SXM0 396 aa13.5□□□□□ -0.25
CYFIP1-210ENST00000619290 SLFN12Q8IYM2 578 aa13.5□□□□□ -0.25
CYFIP1-210ENST00000619290 KIF12Q96FN5 646 aa13.5□□□□□ -0.25
CYFIP1-210ENST00000619290 JAKMIP1Q96N16 626 aaKnown RBP13.5□□□□□ -0.25
CYFIP1-210ENST00000619290 AIFM3Q96NN9 605 aa13.5□□□□□ -0.25
CYFIP1-210ENST00000619290 TMEM209Q96SK2 561 aa13.5□□□□□ -0.25
CYFIP1-210ENST00000619290 C2orf40Q9H1Z8 148 aa13.5□□□□□ -0.25
CYFIP1-210ENST00000619290 POLR3BQ9NW08 1133 aaPredicted RBP13.5□□□□□ -0.25
CYFIP1-210ENST00000619290 MAFFQ9ULX9 164 aa13.5□□□□□ -0.25
CYFIP1-210ENST00000619290 KCNJ14Q9UNX9 436 aa13.5□□□□□ -0.25
CYFIP1-210ENST00000619290 PDCD11Q14690 1871 aaKnown RBP13.49□□□□□ -0.25
CYFIP1-210ENST00000619290 BCLAF3A2AJT9 711 aaKnown RBP13.49□□□□□ -0.25
CYFIP1-210ENST00000619290 ACKR2O00590 384 aa13.49□□□□□ -0.25
CYFIP1-210ENST00000619290 DCLK1O15075 740 aa13.49□□□□□ -0.25
CYFIP1-210ENST00000619290 BAG4O95429 457 aaKnown RBP13.49□□□□□ -0.25
CYFIP1-210ENST00000619290 BLOC1S2Q6QNY1 142 aa13.49□□□□□ -0.25
CYFIP1-210ENST00000619290 RNF19BQ6ZMZ0 732 aa13.49□□□□□ -0.25
CYFIP1-210ENST00000619290 TMC8Q8IU68 726 aa13.49□□□□□ -0.25
CYFIP1-210ENST00000619290 CAMKK1Q8N5S9 505 aa13.49□□□□□ -0.25
CYFIP1-210ENST00000619290 HHIPQ96QV1 700 aa13.49□□□□□ -0.25
CYFIP1-210ENST00000619290 LRRC3Q9BY71 257 aa13.49□□□□□ -0.25
CYFIP1-210ENST00000619290 TMEM9BQ9NQ34 198 aa13.49□□□□□ -0.25
CYFIP1-210ENST00000619290 YIPF1Q9Y548 306 aa13.49□□□□□ -0.25
CYFIP1-210ENST00000619290 NUB1Q9Y5A7 615 aa13.49□□□□□ -0.25
CYFIP1-210ENST00000619290 SPAG17Q6Q759 2223 aa13.48□□□□□ -0.25
CYFIP1-210ENST00000619290 DMXL2Q8TDJ6 3036 aa13.48□□□□□ -0.25
CYFIP1-210ENST00000619290 HYAL3O43820 417 aaPredicted RBP13.48□□□□□ -0.25
CYFIP1-210ENST00000619290 CPB1P15086 417 aa13.48□□□□□ -0.25
CYFIP1-210ENST00000619290 PLCB2Q00722 1185 aa13.48□□□□□ -0.25
CYFIP1-210ENST00000619290 GRSF1Q12849 480 aaKnown RBP eCLIP13.48□□□□□ -0.25
CYFIP1-210ENST00000619290 ITPRIPL2Q3MIP1 535 aa13.48□□□□□ -0.25
CYFIP1-210ENST00000619290 ZNF280DQ6N043 979 aa13.48□□□□□ -0.25
CYFIP1-210ENST00000619290 PIK3AP1Q6ZUJ8 805 aa13.48□□□□□ -0.25
CYFIP1-210ENST00000619290 FBXL16Q8N461 479 aa13.48□□□□□ -0.25
CYFIP1-210ENST00000619290 MCPH1Q8NEM0 835 aa13.48□□□□□ -0.25
CYFIP1-210ENST00000619290 DEFB124Q8NES8 71 aa13.48□□□□□ -0.25
CYFIP1-210ENST00000619290 BSNDQ8WZ55 320 aa13.48□□□□□ -0.25
CYFIP1-210ENST00000619290 NAP1L4Q99733 375 aaKnown RBP13.48□□□□□ -0.25
CYFIP1-210ENST00000619290 AGXT2Q9BYV1 514 aa13.48□□□□□ -0.25
CYFIP1-210ENST00000619290 CCDC113Q9H0I3 377 aa13.48□□□□□ -0.25
CYFIP1-210ENST00000619290 NEUROG3Q9Y4Z2 214 aa13.48□□□□□ -0.25
CYFIP1-210ENST00000619290 KHNYNO15037 678 aaKnown RBP13.47□□□□□ -0.25
CYFIP1-210ENST00000619290 RNF40O75150 1001 aa13.47□□□□□ -0.25
CYFIP1-210ENST00000619290 ATP2B1P20020 1258 aa13.47□□□□□ -0.25
CYFIP1-210ENST00000619290 RPS6KB1P23443 525 aa13.47□□□□□ -0.25
CYFIP1-210ENST00000619290 YARSP54577 528 aaKnown RBP13.47□□□□□ -0.25
CYFIP1-210ENST00000619290 KARSQ15046 597 aaKnown RBP13.47□□□□□ -0.25
CYFIP1-210ENST00000619290 UAP1L1Q3KQV9 507 aa13.47□□□□□ -0.25
CYFIP1-210ENST00000619290 TMEM196Q5HYL7 178 aa13.47□□□□□ -0.25
CYFIP1-210ENST00000619290 FSTL4Q6MZW2 842 aa13.47□□□□□ -0.25
CYFIP1-210ENST00000619290 FAM177A1Q8N128 213 aaPredicted RBP13.47□□□□□ -0.25
CYFIP1-210ENST00000619290 BPIFB1Q8TDL5 484 aa13.47□□□□□ -0.25
CYFIP1-210ENST00000619290 MKNK1Q9BUB5 465 aa13.47□□□□□ -0.25
CYFIP1-210ENST00000619290 SLC38A7Q9NVC3 462 aa13.47□□□□□ -0.25
CYFIP1-210ENST00000619290 OBP2AQ9NY56 170 aa13.47□□□□□ -0.25
CYFIP1-210ENST00000619290 KLK13Q9UKR3 277 aa13.47□□□□□ -0.25
CYFIP1-210ENST00000619290 MSRB2Q9Y3D2 182 aa13.47□□□□□ -0.25
CYFIP1-210ENST00000619290 FLNBO75369 2602 aaKnown RBP13.47□□□□□ -0.25
CYFIP1-210ENST00000619290 CDX4O14627 284 aaPredicted RBP13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 CPLX1O14810 134 aa13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 PRAMEF12O95522 483 aa13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 GBP1P32455 592 aa13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 EPHB3P54753 998 aa13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 PLD1Q13393 1074 aa13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 PTPAQ15257 358 aa13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 SOWAHCQ53LP3 525 aaPredicted RBP13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 GPR158Q5T848 1215 aa13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 ATF7IP2Q5U623 682 aa13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 ALKAL1Q6UXT8 129 aa13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 CEP120Q8N960 986 aa13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 APPL2Q8NEU8 664 aa13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 DEPTORQ8TB45 409 aa13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 DDX12PQ92771 950 aa13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 SUSD3Q96L08 255 aa13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 ZMAT2Q96NC0 199 aaKnown RBP13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 PGLYRP2Q96PD5 576 aa13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 DNAJC25Q9H1X3 360 aa13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 ATXN3LQ9H3M9 355 aa13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 TOPORSQ9NS56 1045 aaPredicted RBP13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 PCDHA12Q9UN75 941 aa13.46□□□□□ -0.25
CYFIP1-210ENST00000619290 PATE3B3GLJ2 98 aa13.45□□□□□ -0.26
CYFIP1-210ENST00000619290 ZIC2O95409 532 aaPredicted RBP13.45□□□□□ -0.26
CYFIP1-210ENST00000619290 VNN2O95498 520 aa13.45□□□□□ -0.26
CYFIP1-210ENST00000619290 EGFP01133 1207 aa13.45□□□□□ -0.26
CYFIP1-210ENST00000619290 XRCC6P12956 609 aaKnown RBP eCLIP13.45□□□□□ -0.26
CYFIP1-210ENST00000619290 MCM4P33991 863 aa13.45□□□□□ -0.26
CYFIP1-210ENST00000619290 NAMPTP43490 491 aa13.45□□□□□ -0.26
CYFIP1-210ENST00000619290 EVCP57679 992 aa13.45□□□□□ -0.26
CYFIP1-210ENST00000619290 OSTNP61366 133 aa13.45□□□□□ -0.26
CYFIP1-210ENST00000619290 DUSP4Q13115 394 aa13.45□□□□□ -0.26
CYFIP1-210ENST00000619290 ARHGAP15Q53QZ3 475 aa13.45□□□□□ -0.26
CYFIP1-210ENST00000619290 XKR4Q5GH76 650 aa13.45□□□□□ -0.26
CYFIP1-210ENST00000619290 NT5DC1Q5TFE4 455 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms