RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 CEP170P1Q96L14 293 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 PARK7Q99497 189 aaKnown RBP7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 STK33Q9BYT3 514 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 PARVGQ9HBI0 331 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 MLXIPLQ9NP71 852 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 DBR1Q9UK59 544 aaKnown RBP7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 C15orf41Q9Y2V0 281 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 NOP56O00567 594 aaKnown RBP7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 CNMDO75829 334 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 GGPS1O95749 300 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 SHBGP04278 402 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 FBXO45P0C2W1 286 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 ATP2A2P16615 1042 aaKnown RBP7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 GCLCP48506 637 aaPredicted RBP7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 RASSF2P50749 326 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 IFI35P80217 286 aaPredicted RBP7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 IL9RQ01113 521 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 SATB1Q01826 763 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 MOGSQ13724 837 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 KCTD19Q17RG1 926 aaPredicted RBP7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 FAM102BQ5T8I3 360 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 PLA2G4FQ68DD2 849 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 SDE2Q6IQ49 451 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 ZNF746Q6NUN9 644 aaPredicted RBP7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 MIS18BP1Q6P0N0 1132 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 MAIP1Q8WWC4 291 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 SEPT9Q9UHD8 586 aaPredicted RBP7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 AKAP3O75969 853 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 RGS20O76081 388 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 ACTR2P61160 394 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 COPS2P61201 443 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 STRN3Q13033 797 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 PPP1R21Q6ZMI0 780 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 GSTA5Q7RTV2 222 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 KIF2BQ8N4N8 673 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 TLCD1Q96CP7 247 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 C18orf8Q96DM3 657 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 HES6Q96HZ4 224 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 SEMA4AQ9H3S1 761 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 CPSF2Q9P2I0 782 aaKnown RBP7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 LARSQ9P2J5 1176 aaKnown RBP7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 CPA4Q9UI42 421 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 TRAF3IP3Q9Y228 551 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 L3MBTL1Q9Y468 752 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 MYH10P35580 1976 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 TMEM120BA0PK00 339 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 SPATA31C2B4DYI2 1134 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 PPP1R12AO14974 1030 aaPredicted RBP7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 ZBTB48P10074 688 aaPredicted RBP7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 BRAFP15056 766 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 ATF2P15336 505 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 MUTP22033 750 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 NMT1P30419 496 aaKnown RBP7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 ADCY8P40145 1251 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 MMP13P45452 471 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 VPS41P49754 854 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 TAF1CQ15572 869 aaPredicted RBP7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 SGO2Q562F6 1265 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 AP1ARQ63HQ0 302 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 FAM174AQ8TBP5 190 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 GRK7Q8WTQ7 553 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 TGS1Q96RS0 853 aaKnown RBP7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 FGFBP2Q9BYJ0 223 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 ROPN1BQ9BZX4 212 aaPredicted RBP7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 KCTD10Q9H3F6 313 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 ROPN1Q9HAT0 212 aaPredicted RBP7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 ETNK1Q9HBU6 452 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 ALG6Q9Y672 507 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 ITGBL1O95965 494 aaPredicted RBP7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 KCNA2P16389 499 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 ECHS1P30084 290 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 GPC5P78333 572 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 ADCY1Q08828 1119 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 UGCGQ16739 394 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 LONRF1Q17RB8 773 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 MTERF2Q49AM1 385 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 DUPD1Q68J44 220 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 CEP128Q6ZU80 1094 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 C1orf186Q6ZWK4 172 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 TRMT10CQ7L0Y3 403 aaKnown RBP7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 ANKRD23Q86SG2 305 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 FBXO16Q8IX29 292 aaPredicted RBP7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 INTS2Q9H0H0 1204 aaKnown RBP7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 THAP2Q9H0W7 228 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 ABCF3Q9NUQ8 709 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 TBK1Q9UHD2 729 aa7.42□□□□□ -1.22
SRGAP3-213ENST00000618999 FRMPD4Q14CM0 1322 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 PHIPQ8WWQ0 1821 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 FTLP02792 175 aaPredicted RBP7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 RARGP13631 454 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 MAN1A1P33908 653 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 CASP4P49662 377 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 RARRES1P49788 294 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 SP2Q02086 613 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 SNX1Q13596 522 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 LLGL1Q15334 1064 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 LY6KQ17RY6 165 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 PITPNM3Q9BZ71 974 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms