RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 RUSC1Q9BVN2 902 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 SLITRK6Q9H5Y7 841 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 WDR70Q9NW82 654 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 SQORQ9Y6N5 450 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 SEC16AO15027 2179 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 AGTP01019 485 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 PON1P27169 355 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 TRIM28Q13263 835 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 CYP4F22Q6NT55 531 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 DPY19L2P1Q6NXN4 242 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 PPP4R3CPQ6ZMV5 832 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 TTC39CQ8N584 583 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 MYCT1Q8N699 235 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 SLC35G2Q8TBE7 412 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 SPOCK2Q92563 424 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 MAP3K20Q9NYL2 800 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 PASKQ96RG2 1323 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 NVLO15381 856 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 PCNAP12004 261 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 MAP4P27816 1152 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 HSPA1LP34931 641 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 BNIPLQ7Z465 357 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 FRMD8P1Q9BZ68 369 aaPredicted RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 OSBPL7Q9BZF2 842 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 CLEC4MQ9H2X3 399 aaPredicted RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 CAPN6Q9Y6Q1 641 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 TRDMT1O14717 391 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 PDE8AO60658 829 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 ITGA10O75578 1167 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 EN1Q05925 392 aaPredicted RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 SULT1C3Q6IMI6 304 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 ALKBH5Q6P6C2 394 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 C11orf88Q6PI97 169 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 CCDC103Q8IW40 242 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 RCOR2Q8IZ40 523 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 ZNF652Q9Y2D9 606 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 CHKAP35790 457 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 LIFRP42702 1097 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 ZNF844Q08AG5 666 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 SLC5A9Q2M3M2 681 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 PUS10Q3MIT2 529 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 DYDC2Q96IM9 177 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 HERPUD2Q9BSE4 406 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 FHDC1Q9C0D6 1143 aaPredicted RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 ZNF212Q9UDV6 495 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 RPS17P08708 135 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 RGS2P41220 211 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 RASA3Q14644 834 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 ZNF804AQ7Z570 1209 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 GLYCTKQ8IVS8 523 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 ATP11CQ8NB49 1132 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 POMGNT1Q8WZA1 660 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 VPS39Q96JC1 886 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 OLFML3Q9NRN5 406 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 NR2E3Q9Y5X4 410 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 TNKSO95271 1327 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 ARFIP2P53365 341 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 PPIL2Q13356 520 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 PRR11Q96HE9 360 aaPredicted RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 ARMCX3Q9UH62 379 aaPredicted RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 BARX2Q9UMQ3 279 aaPredicted RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 ASXL1Q8IXJ9 1541 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 IGF2BP3O00425 579 aaKnown RBP eCLIP3.23□□□□□ -1.89
NEB-220ENST00000618972 AFPP02771 609 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 ITGADQ13349 1161 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 DHX34Q14147 1143 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 COL19A1Q14993 1142 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 R3HDM1Q15032 1099 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 ZNF568Q3ZCX4 644 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 ARMCX4Q5H9R4 360 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 SLFN12Q8IYM2 578 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 C19orf18Q8NEA5 215 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 ASIC3Q9UHC3 531 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 MCM8Q9UJA3 840 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 COL4A3BPQ9Y5P4 624 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 SYNGAP1Q96PV0 1343 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 NOP56O00567 594 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 MED24O75448 989 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 FSBPO95073 299 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 CALCRLQ16602 461 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 TMEM206Q9H813 350 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 BTG4Q9NY30 223 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 FAM237AA0A1B0GTK4 181 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 GTPBP10A4D1E9 387 aaKnown RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 PIK3CAP42336 1068 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 GCLCP48506 637 aaPredicted RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 ENPEPQ07075 957 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 ALG3Q92685 438 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 SEMA4DQ92854 862 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 SLC5A5Q92911 643 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 NLRP4Q96MN2 994 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 PENKP01210 267 aaPredicted RBP3.23□□□□□ -1.89
NEB-220ENST00000618972 HIC1Q14526 733 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 HAS1Q92839 578 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 TM4SF1P30408 202 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 CYFIP2Q96F07 1278 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 TINF2Q9BSI4 451 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 SMARCAD1Q9H4L7 1026 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 CARMIL3Q8ND23 1372 aa3.23□□□□□ -1.89
NEB-220ENST00000618972 SAGE2PA6NJ88 616 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms