RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ZC3H10Q96K80 434 aaKnown RBP15.69■□□□□ 0.1
COL5A1-208ENST00000618395 RABL2BQ9UNT1 228 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 ZNF211Q13398 564 aaPredicted RBP15.69■□□□□ 0.1
COL5A1-208ENST00000618395 HEATR6Q6AI08 1181 aaKnown RBP15.69■□□□□ 0.1
COL5A1-208ENST00000618395 BNC2Q6ZN30 1099 aaPredicted RBP15.69■□□□□ 0.1
COL5A1-208ENST00000618395 STK32AQ8WU08 396 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 USP13Q92995 863 aaPredicted RBP15.69■□□□□ 0.1
COL5A1-208ENST00000618395 MRPL48Q96GC5 212 aaKnown RBP15.69■□□□□ 0.1
COL5A1-208ENST00000618395 ZNF285Q96NJ3 590 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 ZNF222Q9UK12 451 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 LRRIQ4A6NIV6 560 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 ABLIM1O14639 778 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 HUS1O60921 280 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 H2AFXP16104 143 aaPredicted RBP15.69■□□□□ 0.1
COL5A1-208ENST00000618395 STAT5AP42229 794 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 STAT5BP51692 787 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 CHN2P52757 468 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 KCNK10P57789 538 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 LCORLQ8N3X6 602 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 CARD14Q9BXL6 1004 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 COMMD9Q9P000 198 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 SLC12A4Q9UP95 1085 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 ZNF532Q9HCE3 1301 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 KCNQ4P56696 695 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 CDO1Q16878 200 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 ZNF568Q3ZCX4 644 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 EGFL8Q99944 293 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 TRIM54Q9BYV2 358 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 THRAP10827 490 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 ARF5P84085 180 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 ERICH1Q86X53 443 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 LRRC34Q8IZ02 419 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 BORCS5Q969J3 196 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 BDH2Q9BUT1 245 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 MEI4A8MW99 385 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 NPR2P20594 1047 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 HSF2Q03933 536 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 ADGBQ8N7X0 1667 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 FOSL1P15407 271 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 TYSND1Q2T9J0 566 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 MIGA2Q7L4E1 593 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 NIP7Q9Y221 180 aaKnown RBP eCLIP15.68■□□□□ 0.1
COL5A1-208ENST00000618395 VBP1P61758 197 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 POC5Q8NA72 575 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 PIK3C3Q8NEB9 887 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 TRPC5OSA6NMA1 111 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 CLIC2O15247 247 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 XRCC4Q13426 336 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 MARK2Q7KZI7 788 aaKnown RBP15.68■□□□□ 0.1
COL5A1-208ENST00000618395 ATXN7L3BQ96GX2 97 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 COX4I2Q96KJ9 171 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 ADAM22Q9P0K1 906 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 A0A0B4J269 797 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 NPR3P17342 541 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 TUBB3Q13509 450 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 SUZ12Q15022 739 aaKnown RBP15.68■□□□□ 0.1
COL5A1-208ENST00000618395 TIMM50Q3ZCQ8 353 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 PMF1Q6P1K2 205 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 WDR93Q6P2C0 686 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 LRRC17Q8N6Y2 441 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 TSPYL6Q8N831 410 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 RBM46Q8TBY0 533 aaKnown RBP15.68■□□□□ 0.1
COL5A1-208ENST00000618395 EYA3Q99504 573 aa15.68■□□□□ 0.1
COL5A1-208ENST00000618395 RBMX2Q9Y388 322 aaKnown RBP15.68■□□□□ 0.1
COL5A1-208ENST00000618395 TPST1O60507 370 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 RTN3O95197 1032 aaPredicted RBP15.67■□□□□ 0.1
COL5A1-208ENST00000618395 HSD17B3P37058 310 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 GRM1Q13255 1194 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 NSMFQ6X4W1 530 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 IZUMO1Q8IYV9 350 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 ISCUQ9H1K1 167 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 MOV10Q9HCE1 1003 aaKnown RBP15.67■□□□□ 0.1
COL5A1-208ENST00000618395 CLEC11AQ9Y240 323 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 MYO3BQ8WXR4 1341 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 GCLCP48506 637 aaPredicted RBP15.67■□□□□ 0.1
COL5A1-208ENST00000618395 RAD23AP54725 363 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 OCLNQ16625 522 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 TRNAU1APQ9NX07 287 aaKnown RBP15.67■□□□□ 0.1
COL5A1-208ENST00000618395 LOC100653049A0A140TA62 436 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 SPAG6O75602 509 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 KRT34O76011 436 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 PAX3P23760 479 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 PTK7Q13308 1070 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 E2F7Q96AV8 911 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 C18orf25Q96B23 403 aaPredicted RBP15.67■□□□□ 0.1
COL5A1-208ENST00000618395 SH3KBP1Q96B97 665 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 RNF26Q9BY78 433 aaPredicted RBP15.67■□□□□ 0.1
COL5A1-208ENST00000618395 CFAP43Q8NDM7 1665 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 ATF6P18850 670 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 QPRTQ15274 297 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 RASA2Q15283 850 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 CHI3L2Q15782 390 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 TEKT3Q9BXF9 490 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 USP39Q53GS9 565 aaKnown RBP15.67■□□□□ 0.1
COL5A1-208ENST00000618395 RHOT1Q8IXI2 618 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 CNBD1Q8NA66 436 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 NDNQ99608 321 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 GRID1Q9ULK0 1009 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 GNPATO15228 680 aa15.67■□□□□ 0.1
COL5A1-208ENST00000618395 TBC1D12O60347 775 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms