RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 ZNF560Q96MR9 790 aa24.39■■□□□ 1.5
CBWD3-213ENST00000618217 C11orf84Q9BUA3 381 aaPredicted RBP24.39■■□□□ 1.5
CBWD3-213ENST00000618217 ZNF576Q9H609 170 aa24.39■■□□□ 1.5
CBWD3-213ENST00000618217 RAB20Q9NX57 234 aa24.39■■□□□ 1.5
CBWD3-213ENST00000618217 GDAP2Q9NXN4 497 aa24.39■■□□□ 1.5
CBWD3-213ENST00000618217 GTPBP10A4D1E9 387 aaKnown RBP24.39■■□□□ 1.49
CBWD3-213ENST00000618217 EPOPA6NHQ4 379 aa24.39■■□□□ 1.49
CBWD3-213ENST00000618217 KPNA7A9QM74 516 aa24.39■■□□□ 1.49
CBWD3-213ENST00000618217 H3BNC9 293 aa24.39■■□□□ 1.49
CBWD3-213ENST00000618217 I3L4J1 428 aa24.39■■□□□ 1.49
CBWD3-213ENST00000618217 M0QZQ0 153 aa24.39■■□□□ 1.49
CBWD3-213ENST00000618217 PIK3CAP42336 1068 aa24.39■■□□□ 1.49
CBWD3-213ENST00000618217 TPM4P67936 248 aa24.39■■□□□ 1.49
CBWD3-213ENST00000618217 SGSM1Q2NKQ1 1148 aa24.39■■□□□ 1.49
CBWD3-213ENST00000618217 FUT10Q6P4F1 479 aa24.39■■□□□ 1.49
CBWD3-213ENST00000618217 TAS1R1Q7RTX1 841 aa24.39■■□□□ 1.49
CBWD3-213ENST00000618217 FBXO22Q8NEZ5 403 aa24.39■■□□□ 1.49
CBWD3-213ENST00000618217 LRCH3Q96II8 777 aa24.39■■□□□ 1.49
CBWD3-213ENST00000618217 NUB1Q9Y5A7 615 aa24.39■■□□□ 1.49
CBWD3-213ENST00000618217 SF3B1O75533 1304 aaKnown RBP eCLIP24.38■■□□□ 1.49
CBWD3-213ENST00000618217 TMEM265A0A087WTH1 108 aa24.38■■□□□ 1.49
CBWD3-213ENST00000618217 MYO1EQ12965 1108 aa24.38■■□□□ 1.49
CBWD3-213ENST00000618217 SV2CQ496J9 727 aa24.38■■□□□ 1.49
CBWD3-213ENST00000618217 HABP4Q5JVS0 413 aaKnown RBP24.38■■□□□ 1.49
CBWD3-213ENST00000618217 ARNTL2Q8WYA1 636 aa24.38■■□□□ 1.49
CBWD3-213ENST00000618217 TAF4BQ92750 862 aa24.38■■□□□ 1.49
CBWD3-213ENST00000618217 ELMO3Q96BJ8 720 aa24.38■■□□□ 1.49
CBWD3-213ENST00000618217 PI4K2AQ9BTU6 479 aa24.38■■□□□ 1.49
CBWD3-213ENST00000618217 TTYH1Q9H313 450 aaPredicted RBP24.38■■□□□ 1.49
CBWD3-213ENST00000618217 ALG13Q9NP73 1137 aaKnown RBP24.38■■□□□ 1.49
CBWD3-213ENST00000618217 LZTS1Q9Y250 596 aa24.38■■□□□ 1.49
CBWD3-213ENST00000618217 DNAJB1P25685 340 aa24.37■■□□□ 1.49
CBWD3-213ENST00000618217 KRT17Q04695 432 aa24.37■■□□□ 1.49
CBWD3-213ENST00000618217 LIMS2Q7Z4I7 341 aa24.37■■□□□ 1.49
CBWD3-213ENST00000618217 APOBEC3GQ9HC16 384 aaKnown RBP24.37■■□□□ 1.49
CBWD3-213ENST00000618217 R3HCC1Q9Y3T6 440 aaKnown RBP24.37■■□□□ 1.49
CBWD3-213ENST00000618217 LGALS16A8MUM7 142 aa24.36■■□□□ 1.49
CBWD3-213ENST00000618217 TRAPPC3O43617 180 aa24.36■■□□□ 1.49
CBWD3-213ENST00000618217 ELAVL2Q12926 359 aaKnown RBP24.36■■□□□ 1.49
CBWD3-213ENST00000618217 CAMK1Q14012 370 aa24.36■■□□□ 1.49
CBWD3-213ENST00000618217 EHBP1Q8NDI1 1231 aa24.36■■□□□ 1.49
CBWD3-213ENST00000618217 SENP8Q96LD8 212 aa24.36■■□□□ 1.49
CBWD3-213ENST00000618217 NAP1L5Q96NT1 182 aaPredicted RBP24.36■■□□□ 1.49
CBWD3-213ENST00000618217 CHST7Q9NS84 486 aa24.36■■□□□ 1.49
CBWD3-213ENST00000618217 GRM6O15303 877 aa24.35■■□□□ 1.49
CBWD3-213ENST00000618217 FGFR3P22607 806 aa24.35■■□□□ 1.49
CBWD3-213ENST00000618217 FANCCQ00597 558 aa24.35■■□□□ 1.49
CBWD3-213ENST00000618217 UBE3AQ05086 875 aa24.35■■□□□ 1.49
CBWD3-213ENST00000618217 CETN1Q12798 172 aa24.35■■□□□ 1.49
CBWD3-213ENST00000618217 GPM6BQ13491 265 aa24.35■■□□□ 1.49
CBWD3-213ENST00000618217 ZNF699Q32M78 642 aa24.35■■□□□ 1.49
CBWD3-213ENST00000618217 WDR72Q3MJ13 1102 aa24.35■■□□□ 1.49
CBWD3-213ENST00000618217 SPOPLQ6IQ16 392 aa24.35■■□□□ 1.49
CBWD3-213ENST00000618217 CRACR2AQ9BSW2 395 aa24.35■■□□□ 1.49
CBWD3-213ENST00000618217 RTN4Q9NQC3 1192 aaKnown RBP24.35■■□□□ 1.49
CBWD3-213ENST00000618217 COL4A4P53420 1690 aaPredicted RBP24.35■■□□□ 1.49
CBWD3-213ENST00000618217 TSC2P49815 1807 aa24.35■■□□□ 1.49
CBWD3-213ENST00000618217 A0A1B0GTH6 734 aa24.35■■□□□ 1.49
CBWD3-213ENST00000618217 SOD2P04179 222 aa24.35■■□□□ 1.49
CBWD3-213ENST00000618217 GSE1Q14687 1217 aa24.35■■□□□ 1.49
CBWD3-213ENST00000618217 FAM171A1Q5VUB5 890 aa24.35■■□□□ 1.49
CBWD3-213ENST00000618217 DPY19L2P1Q6NXN4 242 aa24.35■■□□□ 1.49
CBWD3-213ENST00000618217 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.35■■□□□ 1.49
CBWD3-213ENST00000618217 STK39Q9UEW8 545 aa24.35■■□□□ 1.49
CBWD3-213ENST00000618217 PCDHB8Q9UN66 801 aa24.35■■□□□ 1.49
CBWD3-213ENST00000618217 SNX9Q9Y5X1 595 aa24.35■■□□□ 1.49
CBWD3-213ENST00000618217 ATG2AQ2TAZ0 1938 aa24.34■■□□□ 1.49
CBWD3-213ENST00000618217 CYB561D2O14569 222 aa24.34■■□□□ 1.49
CBWD3-213ENST00000618217 LPXNO60711 386 aa24.34■■□□□ 1.49
CBWD3-213ENST00000618217 TPM2P07951 284 aa24.34■■□□□ 1.49
CBWD3-213ENST00000618217 NOP14P78316 857 aaKnown RBP24.34■■□□□ 1.49
CBWD3-213ENST00000618217 KCNMA1Q12791 1236 aa24.34■■□□□ 1.49
CBWD3-213ENST00000618217 SOWAHAQ2M3V2 549 aa24.34■■□□□ 1.49
CBWD3-213ENST00000618217 ZNF667Q5HYK9 610 aa24.34■■□□□ 1.49
CBWD3-213ENST00000618217 GBP6Q6ZN66 633 aa24.34■■□□□ 1.49
CBWD3-213ENST00000618217 VPS52Q8N1B4 723 aa24.34■■□□□ 1.49
CBWD3-213ENST00000618217 POF1BQ8WVV4 589 aa24.34■■□□□ 1.49
CBWD3-213ENST00000618217 TATDN2Q93075 761 aa24.34■■□□□ 1.49
CBWD3-213ENST00000618217 B3GALT6Q96L58 329 aa24.34■■□□□ 1.49
CBWD3-213ENST00000618217 HERC2P3Q9BVR0 1158 aa24.34■■□□□ 1.49
CBWD3-213ENST00000618217 INTS2Q9H0H0 1204 aaKnown RBP24.34■■□□□ 1.49
CBWD3-213ENST00000618217 GCNT4Q9P109 453 aa24.34■■□□□ 1.49
CBWD3-213ENST00000618217 POLIQ9UNA4 740 aa24.34■■□□□ 1.49
CBWD3-213ENST00000618217 CDH23Q9H251 3354 aa24.34■■□□□ 1.49
CBWD3-213ENST00000618217 MYO7AQ13402 2215 aa24.33■■□□□ 1.49
CBWD3-213ENST00000618217 PES1O00541 588 aaKnown RBP24.33■■□□□ 1.49
CBWD3-213ENST00000618217 CYP11A1P05108 521 aa24.33■■□□□ 1.49
CBWD3-213ENST00000618217 SLC9A1P19634 815 aa24.33■■□□□ 1.49
CBWD3-213ENST00000618217 PON1P27169 355 aa24.33■■□□□ 1.49
CBWD3-213ENST00000618217 TKTP29401 623 aaKnown RBP24.33■■□□□ 1.49
CBWD3-213ENST00000618217 EXOC3L4Q17RC7 722 aa24.33■■□□□ 1.49
CBWD3-213ENST00000618217 USP41Q3LFD5 358 aa24.33■■□□□ 1.49
CBWD3-213ENST00000618217 DSTYKQ6XUX3 929 aa24.33■■□□□ 1.49
CBWD3-213ENST00000618217 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.33■■□□□ 1.49
CBWD3-213ENST00000618217 IMPG2Q9BZV3 1241 aa24.33■■□□□ 1.49
CBWD3-213ENST00000618217 NXF1Q9UBU9 619 aaKnown RBP24.33■■□□□ 1.49
CBWD3-213ENST00000618217 PUF60Q9UHX1 559 aaKnown RBP24.33■■□□□ 1.49
CBWD3-213ENST00000618217 L1RE1Q9UN81 338 aa24.33■■□□□ 1.49
CBWD3-213ENST00000618217 RFXAPO00287 272 aa24.32■■□□□ 1.48
CBWD3-213ENST00000618217 SYN3O14994 580 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms