RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 LINC00523Q86TU6 105 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 BBS7Q8IWZ6 715 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 PRPF18Q99633 342 aaKnown RBP11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 STK33Q9BYT3 514 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 USE1Q9NZ43 259 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 DEAF1O75398 565 aaPredicted RBP11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 ATP1A3P13637 1013 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 MFSD4BQ5TF39 518 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 LDHDQ86WU2 507 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 NT5C1AQ9BXI3 368 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 GID8Q9NWU2 228 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 SMARCAL1Q9NZC9 954 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 APEX2Q9UBZ4 518 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 MYH8P13535 1937 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 NBPF26B4DH59 902 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 RGS2P41220 211 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 TMEM132BQ14DG7 1078 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 XKR3Q5GH77 459 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 RNPC3Q96LT9 517 aaKnown RBP11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 MYH3P11055 1940 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 EVPLLA8MZ36 301 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 FAM47E-STBD1D6RA91 191 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 POLBP06746 335 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 SOAT1P35610 550 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 RFC5P40937 340 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 PMS1P54277 932 aaKnown RBP11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 CSTF3Q12996 717 aaKnown RBP11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 POLD3Q15054 466 aaPredicted RBP11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 RNF180Q86T96 592 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 KRT78Q8N1N4 520 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 RFWD2Q8NHY2 731 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 OSBPL10Q9BXB5 764 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 ERAP1Q9NZ08 941 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 AGAP1Q9UPQ3 857 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 SESN2P58004 480 aaPredicted RBP11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 CCDC142Q17RM4 750 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 ANKS6Q68DC2 871 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 CYB5R4Q7L1T6 521 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 NT5DC4Q86YG4 428 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 C1orf54Q8WWF1 131 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 TMEM260Q9NX78 707 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 HACL1Q9UJ83 578 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 MAGEA9P43362 315 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 NKX1-1Q15270 411 aaPredicted RBP11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 PCSK7Q16549 785 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 C4orf22Q6V702 233 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 CYGBQ8WWM9 190 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 TMA16Q96EY4 203 aaKnown RBP11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 PDXKO00764 312 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 GRIN3BO60391 1043 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 PDIA5Q14554 519 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 ZNF438Q7Z4V0 828 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 MCEEQ96PE7 176 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 CACNA2D2Q9NY47 1150 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 ZC3H7BQ9UGR2 993 aaKnown RBP11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 H7C1W4 665 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 CYTH3O43739 400 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 GUCY1A2P33402 732 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 SNRPFP62306 86 aaKnown RBP11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 MGAT5BQ3V5L5 792 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 TBC1D10CQ8IV04 446 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 DCP1BQ8IZD4 617 aaKnown RBP11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 AFF2P51816 1311 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 LZTS3O60299 673 aaPredicted RBP11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 DAB1O75553 588 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 SLC2A3P11169 496 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 ODC1P11926 461 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 EPHA7Q15375 998 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 ALX1Q15699 326 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 TDRD10Q5VZ19 366 aaKnown RBP11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 ELP3Q9H9T3 547 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 ETNK1Q9HBU6 452 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 RAB6BQ9NRW1 208 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 A0A1W2PQC6 194 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 SPAG6O75602 509 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 FKBP9O95302 570 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 PGM1P36871 562 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 PLA2G4AP47712 749 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 FAM180AQ6UWF9 173 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 FKBP9P1Q75LS8 142 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 ATP6V1G3Q96LB4 118 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 C20orf96Q9NUD7 363 aaPredicted RBP11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 SNX9Q9Y5X1 595 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 RNASEH1O60930 286 aaKnown RBP11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 ATP2C1P98194 919 aaPredicted RBP11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 KCNB1Q14721 858 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 DDX42Q86XP3 938 aaKnown RBP eCLIP11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 UVRAGQ9P2Y5 699 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 ZNRF3Q9ULT6 936 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 IGSF9BQ9UPX0 1349 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 FAM196BA6NMK8 535 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 CDH18Q13634 790 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 STRIP1Q5VSL9 837 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 TTC39BQ5VTQ0 682 aaPredicted RBP11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 SLC44A5Q8NCS7 719 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 TASP1Q9H6P5 420 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 CLTCL1P53675 1640 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 RRN3P2A6NIE6 340 aa11.68□□□□□ -0.54
CCDC144B-208ENST00000618081 AKAP10O43572 662 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms