RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 ATP8B3O60423 1300 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 A0A0U1RQF3 1178 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 BTNL10A8MVZ5 291 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 ZACNQ401N2 412 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 VPS36Q86VN1 386 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 PALB2Q86YC2 1186 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 FAM71AQ8IYT1 594 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 PPM1KQ8N3J5 372 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 SMG8Q8ND04 991 aaKnown RBP21.98■■□□□ 1.11
SDHA-220ENST00000617470 TATDN2Q93075 761 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 FAM212AQ96EL1 285 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 NOX5Q96PH1 765 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 C1orf112Q9NSG2 853 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 PARP2Q9UGN5 583 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 AKAP5P24588 427 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 TDRD10Q5VZ19 366 aaKnown RBP21.98■■□□□ 1.11
SDHA-220ENST00000617470 ZNF365Q70YC5 407 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 C16orf59Q7L2K0 433 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 FMNL3Q8IVF7 1028 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 HACE1Q8IYU2 909 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 SLC20A1Q8WUM9 679 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 SHC3Q92529 594 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 UBXN4Q92575 508 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 LPPQ93052 612 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 ACAP3Q96P50 834 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 PI4K2AQ9BTU6 479 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 RNF39Q9H2S5 420 aa21.98■■□□□ 1.11
SDHA-220ENST00000617470 ZBBXA8MT70 800 aa21.97■■□□□ 1.11
SDHA-220ENST00000617470 C9IYK1 514 aa21.97■■□□□ 1.11
SDHA-220ENST00000617470 FGBP02675 491 aa21.97■■□□□ 1.11
SDHA-220ENST00000617470 CCDC172P0C7W6 258 aa21.97■■□□□ 1.11
SDHA-220ENST00000617470 SKIP12755 728 aa21.97■■□□□ 1.11
SDHA-220ENST00000617470 GRM5P41594 1212 aa21.97■■□□□ 1.11
SDHA-220ENST00000617470 EPHB4P54760 987 aa21.97■■□□□ 1.11
SDHA-220ENST00000617470 ECHDC2Q86YB7 292 aa21.97■■□□□ 1.11
SDHA-220ENST00000617470 CEP112Q8N8E3 955 aa21.97■■□□□ 1.11
SDHA-220ENST00000617470 TRAIPQ9BWF2 469 aa21.97■■□□□ 1.11
SDHA-220ENST00000617470 LTBP2Q14767 1821 aa21.96■■□□□ 1.11
SDHA-220ENST00000617470 VNN1O95497 513 aa21.96■■□□□ 1.11
SDHA-220ENST00000617470 CLTAP09496 248 aa21.96■■□□□ 1.11
SDHA-220ENST00000617470 ITGA4P13612 1032 aa21.96■■□□□ 1.11
SDHA-220ENST00000617470 YARSP54577 528 aaKnown RBP21.96■■□□□ 1.11
SDHA-220ENST00000617470 KYAT1Q16773 422 aa21.96■■□□□ 1.11
SDHA-220ENST00000617470 NT5C1BQ96P26 610 aa21.96■■□□□ 1.11
SDHA-220ENST00000617470 FNBP1Q96RU3 617 aa21.96■■□□□ 1.11
SDHA-220ENST00000617470 EPC1Q9H2F5 836 aa21.96■■□□□ 1.11
SDHA-220ENST00000617470 RPF1Q9H9Y2 349 aaKnown RBP21.96■■□□□ 1.11
SDHA-220ENST00000617470 CPSF3Q9UKF6 684 aaKnown RBP21.96■■□□□ 1.11
SDHA-220ENST00000617470 PCDHGC5Q9Y5F6 944 aa21.96■■□□□ 1.11
SDHA-220ENST00000617470 ABHD14A-ACY1A0A1B0GW23 586 aa21.96■■□□□ 1.11
SDHA-220ENST00000617470 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.96■■□□□ 1.11
SDHA-220ENST00000617470 CXCL8P10145 99 aa21.96■■□□□ 1.11
SDHA-220ENST00000617470 TNNI1P19237 187 aa21.96■■□□□ 1.11
SDHA-220ENST00000617470 HSP90AA2PQ14568 343 aaPredicted RBP21.96■■□□□ 1.11
SDHA-220ENST00000617470 SCARA3Q6AZY7 606 aa21.96■■□□□ 1.11
SDHA-220ENST00000617470 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.96■■□□□ 1.113e-12■■■□□ 16.5
SDHA-220ENST00000617470 ALS2CR12Q96Q35 445 aa21.96■■□□□ 1.11
SDHA-220ENST00000617470 AGPAT1Q99943 283 aa21.96■■□□□ 1.11
SDHA-220ENST00000617470 KLK14Q9P0G3 267 aa21.96■■□□□ 1.11
SDHA-220ENST00000617470 LRFN2Q9ULH4 789 aa21.96■■□□□ 1.11
SDHA-220ENST00000617470 SNX12Q9UMY4 172 aa21.96■■□□□ 1.11
SDHA-220ENST00000617470 MEIS3P2A8K0S8 358 aa21.95■■□□□ 1.1
SDHA-220ENST00000617470 ZNF185O15231 689 aa21.95■■□□□ 1.1
SDHA-220ENST00000617470 PALMO75781 387 aa21.95■■□□□ 1.1
SDHA-220ENST00000617470 RECQL4O94761 1208 aa21.95■■□□□ 1.1
SDHA-220ENST00000617470 MFAP3P55082 362 aa21.95■■□□□ 1.1
SDHA-220ENST00000617470 PSRC1Q6PGN9 363 aaPredicted RBP21.95■■□□□ 1.1
SDHA-220ENST00000617470 BRSK2Q8IWQ3 736 aa21.95■■□□□ 1.1
SDHA-220ENST00000617470 OR5B17Q8NGF7 314 aa21.95■■□□□ 1.1
SDHA-220ENST00000617470 PGBD4Q96DM1 585 aa21.95■■□□□ 1.1
SDHA-220ENST00000617470 CGRRF1Q99675 332 aa21.95■■□□□ 1.1
SDHA-220ENST00000617470 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.95■■□□□ 1.13e-7■■■■□ 19.3
SDHA-220ENST00000617470 TLR10Q9BXR5 811 aa21.95■■□□□ 1.1
SDHA-220ENST00000617470 ACP6Q9NPH0 428 aa21.95■■□□□ 1.1
SDHA-220ENST00000617470 TAS2R14Q9NYV8 317 aa21.95■■□□□ 1.1
SDHA-220ENST00000617470 NOCTQ9UK39 431 aaKnown RBP21.95■■□□□ 1.1
SDHA-220ENST00000617470 INTUQ9ULD6 942 aa21.95■■□□□ 1.1
SDHA-220ENST00000617470 NCK2O43639 380 aa21.94■■□□□ 1.1
SDHA-220ENST00000617470 ZNF623O75123 536 aa21.94■■□□□ 1.1
SDHA-220ENST00000617470 ZC3H11AO75152 810 aaKnown RBP eCLIP21.94■■□□□ 1.15e-7■□□□□ 11.2
SDHA-220ENST00000617470 HLA-DRAP01903 254 aa21.94■■□□□ 1.1
SDHA-220ENST00000617470 H2AFZP0C0S5 128 aa21.94■■□□□ 1.1
SDHA-220ENST00000617470 CHRNB2P17787 502 aa21.94■■□□□ 1.1
SDHA-220ENST00000617470 MAGEA10P43363 369 aaPredicted RBP21.94■■□□□ 1.1
SDHA-220ENST00000617470 FAM43BQ6ZT52 329 aaPredicted RBP21.94■■□□□ 1.1
SDHA-220ENST00000617470 H2AFVQ71UI9 128 aa21.94■■□□□ 1.1
SDHA-220ENST00000617470 EPS8L1Q8TE68 723 aa21.94■■□□□ 1.1
SDHA-220ENST00000617470 PCDHB7Q9Y5E2 793 aa21.94■■□□□ 1.1
SDHA-220ENST00000617470 GRID2IPA4D2P6 1211 aa21.94■■□□□ 1.1
SDHA-220ENST00000617470 CYP26A1O43174 497 aa21.94■■□□□ 1.1
SDHA-220ENST00000617470 UPP2O95045 317 aa21.94■■□□□ 1.1
SDHA-220ENST00000617470 ATF7P17544 494 aaPredicted RBP21.94■■□□□ 1.1
SDHA-220ENST00000617470 GALCP54803 685 aa21.94■■□□□ 1.1
SDHA-220ENST00000617470 FAM189BP81408 668 aa21.94■■□□□ 1.1
SDHA-220ENST00000617470 TMEM240Q5SV17 173 aa21.94■■□□□ 1.1
SDHA-220ENST00000617470 TEX35Q5T0J7 233 aa21.94■■□□□ 1.1
SDHA-220ENST00000617470 NOP9Q86U38 636 aaKnown RBP21.94■■□□□ 1.1
SDHA-220ENST00000617470 GOLGA1Q92805 767 aa21.94■■□□□ 1.1
SDHA-220ENST00000617470 RNF19AQ9NV58 838 aa21.94■■□□□ 1.1
SDHA-220ENST00000617470 EFCAB14O75071 495 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms