RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	TGM3	Q08188	693 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	NFIX	Q14938	502 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	TRMT2A	Q8IZ69	625 aa	Known RBP	7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	TEX9	Q8N6V9	391 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	COG1	Q8WTW3	980 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	SMYD3	Q9H7B4	428 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	TMEM161A	Q9NX61	479 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	PAK5	Q9P286	719 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	TSR3	Q9UJK0	312 aa	Known RBP	7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	CDYL	Q9Y232	598 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	ATP1A1	P05023	1023 aa	Known RBP	7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	MYL2	P10916	166 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	GPD1	P21695	349 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	CNTN1	Q12860	1018 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	TMED1	Q13445	227 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	GOLGA7B	Q2TAP0	167 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	TMEM259	Q4ZIN3	620 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	SPDYA	Q5MJ70	313 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	C12orf60	Q5U649	245 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	IRAK1BP1	Q5VVH5	260 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	TRAPPC11	Q7Z392	1133 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	PCSK9	Q8NBP7	692 aa	Known RBP	7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	OSBPL9	Q96SU4	736 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	STK33	Q9BYT3	514 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	FRMD8	Q9BZ67	464 aa	Predicted RBP	7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	TAF1D	Q9H5J8	278 aa	Predicted RBP	7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	TMEM51	Q9NW97	253 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	UBQLN1	Q9UMX0	589 aa	Known RBP	7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	MBD5	Q9P267	1494 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	IGSF9B	Q9UPX0	1349 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	CFAP73	A6NFT4	308 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	APOA1	P02647	267 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	CHGB	P05060	677 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	CYP2B6	P20813	491 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	KPNA1	P52294	538 aa	Predicted RBP	7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	CUL3	Q13618	768 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	POLD3	Q15054	466 aa	Predicted RBP	7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	CCDC144B	Q3MJ40	725 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	ITIH5	Q86UX2	942 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	FAM9C	Q8IZT9	166 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	FAM162A	Q96A26	154 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	GLT1D1	Q96MS3	346 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	CCDC90B	Q9GZT6	254 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	ANKEF1	Q9NU02	776 aa		7.72	□□□□□ -1.17
PCDH15-231	ENST00000617271	PRR36	Q9H6K5	1346 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	TRIM49B	A6NDI0	452 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	PJA2	O43164	708 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	PHF2	O75151	1096 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	UPP2	O95045	317 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	MLN	P12872	115 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	HSPA9	P38646	679 aa	Known RBP	7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	GEM	P55040	296 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	KIZ	Q2M2Z5	673 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	AASDH	Q4L235	1098 aa	Predicted RBP	7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	NAPEPLD	Q6IQ20	393 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	SETD3	Q86TU7	594 aa	Predicted RBP	7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	GFM2	Q969S9	779 aa	Known RBP	7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	GPR63	Q9BZJ6	419 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	VCPKMT	Q9H867	229 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	ABCB6	Q9NP58	842 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	GID8	Q9NWU2	228 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	APEX2	Q9UBZ4	518 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	CFAP65	Q6ZU64	1925 aa	Known RBP	7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	CYP27B1	O15528	508 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	ANXA9	O76027	345 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	FDFT1	P37268	417 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	CENPC	Q03188	943 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	ZNF543	Q08ER8	600 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	CDH18	Q13634	790 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	NCOA4	Q13772	614 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	DMC1	Q14565	340 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	TIGD7	Q6NT04	549 aa	Predicted RBP	7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	SGMS1	Q86VZ5	419 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	SKA1	Q96BD8	255 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	RSAD1	Q9HA92	442 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	BLOC1S6	Q9UL45	172 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	DAGLA	Q9Y4D2	1042 aa		7.71	□□□□□ -1.17
PCDH15-231	ENST00000617271	TARBP1	Q13395	1621 aa	Known RBP	7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	FRMD3	A2A2Y4	597 aa		7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271		H0Y626	953 aa		7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	VWA5A	O00534	786 aa		7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	DTNB	O60941	627 aa		7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	HMBS	P08397	361 aa		7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	SUPT20HL2	P0C7V6	817 aa		7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	SPR	P35270	261 aa	Predicted RBP	7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	GCLC	P48506	637 aa	Predicted RBP	7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	HUNK	P57058	714 aa		7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	LLGL1	Q15334	1064 aa		7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	WDR72	Q3MJ13	1102 aa		7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	C10orf120	Q5SQS8	335 aa		7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	ANGEL2	Q5VTE6	544 aa	Known RBP	7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	HORMAD1	Q86X24	394 aa		7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	CHSY1	Q86X52	802 aa		7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	PCYOX1L	Q8NBM8	494 aa		7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	RBBP8NL	Q8NC74	664 aa	Predicted RBP	7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	RIT2	Q99578	217 aa		7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	MYOZ2	Q9NPC6	264 aa		7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	ZSCAN32	Q9NX65	697 aa		7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	GGA3	Q9NZ52	723 aa		7.71	□□□□□ -1.18
PCDH15-231	ENST00000617271	CRLS1	Q9UJA2	301 aa		7.71	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms