RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 NCF1CA8MVU1 366 aaPredicted RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 NCF1P14598 390 aaPredicted RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 NDUFA5Q16718 116 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 ZRANB3Q5FWF4 1079 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 SLC25A24Q6NUK1 477 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 SWSAP1Q6NVH7 229 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 TRIM65Q6PJ69 517 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 OTOAQ7RTW8 1153 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 TRIM48Q8IWZ4 208 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 IPMKQ8NFU5 416 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 SEPT5Q99719 369 aaPredicted RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 HDHD2Q9H0R4 259 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 EPN3Q9H201 632 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 KLHL1Q9NR64 748 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 RIC8BQ9NVN3 520 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 XPO7Q9UIA9 1087 aaKnown RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 USP15Q9Y4E8 981 aaPredicted RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 PRR23AA6NEV1 266 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 EEF2KO00418 725 aaKnown RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 GRAP2O75791 330 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 IFNAR1P17181 557 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 TALDO1P37837 337 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 RGS7P49802 495 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 UGP2Q16851 508 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 WDR72Q3MJ13 1102 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 LRRC71Q8N4P6 559 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 CALR3Q96L12 384 aaKnown RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 LXNQ9BS40 222 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 PCDHA6Q9UN73 950 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 LEMD3Q9Y2U8 911 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 PCDHA8Q9Y5H6 950 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 EMSYQ7Z589 1322 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 PITPNM2Q9BZ72 1349 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 PDZK1P1A8MUH7 402 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 GOLGA8TH3BQL2 631 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 DNALI1O14645 258 aaPredicted RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 NUDT2P50583 147 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 NME5P56597 212 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 RASGRF1Q13972 1273 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 DHX34Q14147 1143 aaKnown RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 NCF4Q15080 339 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 ZHX2Q9Y6X8 837 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 ARHGEF10O15013 1369 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 TRIM24O15164 1050 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 OTUD4Q01804 1114 aaKnown RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 INAQ16352 499 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 ANKS6Q68DC2 871 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 C19orf18Q8NEA5 215 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 RSPH1Q8WYR4 309 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 RFFLQ8WZ73 363 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 CASP10Q92851 521 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 OLFM1Q99784 485 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 ECSITQ9BQ95 431 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 DBR1Q9UK59 544 aaKnown RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 TRIM43BA6NCK2 446 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 ZBTB5O15062 677 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 AGTP01019 485 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 CHRM3P20309 590 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 ADD2P35612 726 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 CCNIQ14094 377 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 TTLL4Q14679 1199 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 PROM2Q8N271 834 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 GPD1LQ8N335 351 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 GIMAP8Q8ND71 665 aaPredicted RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 C9orf72Q96LT7 481 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 ZNF512Q96ME7 567 aaPredicted RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 MRPL4Q9BYD3 311 aaKnown RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 TRIM39Q9HCM9 518 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 WWOXQ9NZC7 414 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 LIMA1Q9UHB6 759 aaKnown RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 SLC39A10Q9ULF5 831 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 FHOD1Q9Y613 1164 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 ERBB3P21860 1342 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 USP27XA6NNY8 438 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 IGF2BP3O00425 579 aaKnown RBP eCLIP6.27□□□□□ -1.41
RFX3-212ENST00000617270 CYP26A1O43174 497 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 RRM2P31350 389 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 PRCPP42785 496 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 MRPS35P82673 323 aaKnown RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 CUL4AQ13619 759 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 ZSWIM7Q19AV6 140 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 KNOP1Q1ED39 458 aaKnown RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 PLEKHA7Q6IQ23 1121 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 FAM45AQ8TCE6 357 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 CPA5Q8WXQ8 436 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 BHMTQ93088 406 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 MCEEQ96PE7 176 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 RCOR1Q9UKL0 485 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 PIN4Q9Y237 131 aaKnown RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 ARIH1Q9Y4X5 557 aaPredicted RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 KIAA0586Q9BVV6 1533 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 FAM47DPA6NHR8 397 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 SKAP2O75563 359 aaPredicted RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 CD2BP2O95400 341 aaKnown RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 ZNF682O95780 498 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 AVPR1AP37288 418 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 CNTN1Q12860 1018 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 SCFD2Q8WU76 684 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms