RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 ZDHHC14Q8IZN3 488 aa16.76■□□□□ 0.27
NR1H3-235ENST00000616973 FAM76AQ8TAV0 307 aa16.76■□□□□ 0.27
NR1H3-235ENST00000616973 MAGOHBQ96A72 148 aaKnown RBP16.76■□□□□ 0.27
NR1H3-235ENST00000616973 FAM212AQ96EL1 285 aa16.76■□□□□ 0.27
NR1H3-235ENST00000616973 TRIM51Q9BSJ1 452 aa16.76■□□□□ 0.27
NR1H3-235ENST00000616973 PRDM4Q9UKN5 801 aa16.76■□□□□ 0.27
NR1H3-235ENST00000616973 CLEC11AQ9Y240 323 aa16.76■□□□□ 0.27
NR1H3-235ENST00000616973 PPFIA4O75335 1185 aa16.75■□□□□ 0.27
NR1H3-235ENST00000616973 SNAI1O95863 264 aaPredicted RBP16.75■□□□□ 0.27
NR1H3-235ENST00000616973 MCF2P10911 925 aa16.75■□□□□ 0.27
NR1H3-235ENST00000616973 GBP1P32455 592 aa16.75■□□□□ 0.27
NR1H3-235ENST00000616973 YWHAEP62258 255 aaKnown RBP16.75■□□□□ 0.27
NR1H3-235ENST00000616973 MAIP1Q8WWC4 291 aa16.75■□□□□ 0.27
NR1H3-235ENST00000616973 C16orf70Q9BSU1 422 aa16.75■□□□□ 0.27
NR1H3-235ENST00000616973 ZNF518BQ9C0D4 1074 aa16.75■□□□□ 0.27
NR1H3-235ENST00000616973 XYLT2Q9H1B5 865 aa16.75■□□□□ 0.27
NR1H3-235ENST00000616973 RPF1Q9H9Y2 349 aaKnown RBP16.75■□□□□ 0.27
NR1H3-235ENST00000616973 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.75■□□□□ 0.27
NR1H3-235ENST00000616973 CITO14578 2027 aa16.75■□□□□ 0.27
NR1H3-235ENST00000616973 HOXD8P13378 290 aaPredicted RBP16.74■□□□□ 0.27
NR1H3-235ENST00000616973 MAN1A1P33908 653 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 FNTAP49354 379 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 TFAMQ00059 246 aaKnown RBP16.74■□□□□ 0.27
NR1H3-235ENST00000616973 GRB14Q14449 540 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 TMEM132AQ24JP5 1023 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 GJC2Q5T442 439 aaPredicted RBP16.74■□□□□ 0.27
NR1H3-235ENST00000616973 AFG1LQ8WV93 481 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 C11orf70Q9BRQ4 267 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 ZNF408Q9H9D4 720 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 CISHQ9NSE2 258 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 LCMT1Q9UIC8 334 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 IQCF3P0C7M6 154 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 MMP8P22894 467 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 TMOD1P28289 359 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 CDH5P33151 784 aaPredicted RBP16.74■□□□□ 0.27
NR1H3-235ENST00000616973 HSD17B3P37058 310 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 MAMLD1Q13495 774 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 AMHR2Q16671 573 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 KYAT1Q16773 422 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 ZNF699Q32M78 642 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 TTMPQ5BVD1 217 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 MAP1SQ66K74 1059 aaPredicted RBP16.74■□□□□ 0.27
NR1H3-235ENST00000616973 PASD1Q8IV76 773 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 SLCO2A1Q92959 643 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 C18orf8Q96DM3 657 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 DPH5Q9H2P9 285 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 LRRC19Q9H756 370 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 ZDHHC18Q9NUE0 388 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 PARVAQ9NVD7 372 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 PCDHGC3Q9UN70 934 aa16.74■□□□□ 0.27
NR1H3-235ENST00000616973 GPR25O00155 361 aa16.73■□□□□ 0.27
NR1H3-235ENST00000616973 PSTPIP1O43586 416 aa16.73■□□□□ 0.27
NR1H3-235ENST00000616973 RPS6KA5O75582 802 aa16.73■□□□□ 0.27
NR1H3-235ENST00000616973 RARAP10276 462 aa16.73■□□□□ 0.27
NR1H3-235ENST00000616973 COILP38432 576 aaPredicted RBP16.73■□□□□ 0.27
NR1H3-235ENST00000616973 ADCYAP1R1P41586 468 aa16.73■□□□□ 0.27
NR1H3-235ENST00000616973 ASPAP45381 313 aa16.73■□□□□ 0.27
NR1H3-235ENST00000616973 IGBP1P78318 339 aa16.73■□□□□ 0.27
NR1H3-235ENST00000616973 UAP1Q16222 522 aaPredicted RBP16.73■□□□□ 0.27
NR1H3-235ENST00000616973 TTC27Q6P3X3 843 aa16.73■□□□□ 0.27
NR1H3-235ENST00000616973 CCDC137Q6PK04 289 aaKnown RBP16.73■□□□□ 0.27
NR1H3-235ENST00000616973 MMS22LQ6ZRQ5 1243 aa16.73■□□□□ 0.27
NR1H3-235ENST00000616973 TMC3Q7Z5M5 1100 aa16.73■□□□□ 0.27
NR1H3-235ENST00000616973 GPR142Q7Z601 462 aa16.73■□□□□ 0.27
NR1H3-235ENST00000616973 CEP120Q8N960 986 aa16.73■□□□□ 0.27
NR1H3-235ENST00000616973 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.73■□□□□ 0.27
NR1H3-235ENST00000616973 ARL8AQ96BM9 186 aa16.73■□□□□ 0.27
NR1H3-235ENST00000616973 ZBTB10Q96DT7 871 aa16.73■□□□□ 0.27
NR1H3-235ENST00000616973 DDX27Q96GQ7 796 aaKnown RBP16.73■□□□□ 0.27
NR1H3-235ENST00000616973 ZNF668Q96K58 619 aaPredicted RBP16.73■□□□□ 0.27
NR1H3-235ENST00000616973 TRIM7Q9C029 511 aa16.73■□□□□ 0.27
NR1H3-235ENST00000616973 PLAAQ9Y263 795 aa16.73■□□□□ 0.27
NR1H3-235ENST00000616973 RALGAPA2Q2PPJ7 1873 aa16.73■□□□□ 0.27
NR1H3-235ENST00000616973 TCRBV7S2A1N4TA0A589 114 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 H0YGN5 161 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 CALB1P05937 261 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 CAPN2P17655 700 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 DUSP28Q4G0W2 176 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 MTHFD1LQ6UB35 978 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 FEZF2Q8TBJ5 459 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 MAML3Q96JK9 1138 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 PARK7Q99497 189 aaKnown RBP16.72■□□□□ 0.27
NR1H3-235ENST00000616973 BCO2Q9BYV7 579 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 TXLNGYQ9BZA5 131 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 FAM129AQ9BZQ8 928 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 PARP2Q9UGN5 583 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 NFS1Q9Y697 457 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 A0A087WZ62 844 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 H3BRB1 525 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 ZEB2O60315 1214 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 SHOX2O60902 331 aaPredicted RBP16.72■□□□□ 0.27
NR1H3-235ENST00000616973 PPFIA2O75334 1257 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 ERLIN2O94905 339 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 CXCL8P10145 99 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 EIF4BP23588 611 aaKnown RBP16.72■□□□□ 0.27
NR1H3-235ENST00000616973 ACTN2P35609 894 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 FLT3P36888 993 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 FAM110CQ1W6H9 321 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 LLGL2Q6P1M3 1020 aa16.72■□□□□ 0.27
NR1H3-235ENST00000616973 DPP9Q86TI2 863 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms