RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 ZNF507Q8TCN5 953 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 RABGGTAQ92696 567 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 PAAF1Q9BRP4 392 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 ADPGKQ9BRR6 497 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 TCHPQ9BT92 498 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 SEMA4AQ9H3S1 761 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 SLC2A4RGQ9NR83 387 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 ANO10Q9NW15 660 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 CACNG4Q9UBN1 327 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 PARP2Q9UGN5 583 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 FBXW11Q9UKB1 542 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 NUMBLQ9Y6R0 609 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 RIF1Q5UIP0 2472 aaKnown RBP16.14■□□□□ 0.17
UBXN1-218ENST00000616865 VWA8A3KMH1 1905 aa16.13■□□□□ 0.17
UBXN1-218ENST00000616865 N4BP3O15049 544 aa16.13■□□□□ 0.17
UBXN1-218ENST00000616865 TADA2AO75478 443 aa16.13■□□□□ 0.17
UBXN1-218ENST00000616865 PPP1R37O75864 691 aa16.13■□□□□ 0.17
UBXN1-218ENST00000616865 PRCPP42785 496 aa16.13■□□□□ 0.17
UBXN1-218ENST00000616865 TUSC3Q13454 348 aa16.13■□□□□ 0.17
UBXN1-218ENST00000616865 KNOP1Q1ED39 458 aaKnown RBP16.13■□□□□ 0.17
UBXN1-218ENST00000616865 ATF7IP2Q5U623 682 aa16.13■□□□□ 0.17
UBXN1-218ENST00000616865 TAS1R3Q7RTX0 852 aa16.13■□□□□ 0.17
UBXN1-218ENST00000616865 MAP4K3Q8IVH8 894 aa16.13■□□□□ 0.17
UBXN1-218ENST00000616865 SCFD1Q8WVM8 642 aa16.13■□□□□ 0.17
UBXN1-218ENST00000616865 TSG101Q99816 390 aa16.13■□□□□ 0.17
UBXN1-218ENST00000616865 TARS2Q9BW92 718 aaKnown RBP16.13■□□□□ 0.17
UBXN1-218ENST00000616865 DLGAP2Q9P1A6 1054 aa16.13■□□□□ 0.17
UBXN1-218ENST00000616865 ZFP37Q9Y6Q3 630 aaPredicted RBP16.13■□□□□ 0.17
UBXN1-218ENST00000616865 PATJQ8NI35 1801 aa16.12■□□□□ 0.17
UBXN1-218ENST00000616865 CASTOR2A6NHX0 329 aa16.12■□□□□ 0.17
UBXN1-218ENST00000616865 CALUO43852 315 aaPredicted RBP16.12■□□□□ 0.17
UBXN1-218ENST00000616865 KIF4AO95239 1232 aa16.12■□□□□ 0.17
UBXN1-218ENST00000616865 LMNAP02545 664 aaKnown RBP16.12■□□□□ 0.17
UBXN1-218ENST00000616865 DCNP07585 359 aaKnown RBP16.12■□□□□ 0.17
UBXN1-218ENST00000616865 FSHRP23945 695 aa16.12■□□□□ 0.17
UBXN1-218ENST00000616865 TYRO3Q06418 890 aa16.12■□□□□ 0.17
UBXN1-218ENST00000616865 BMT2Q1RMZ1 405 aa16.12■□□□□ 0.17
UBXN1-218ENST00000616865 LIN9Q5TKA1 542 aa16.12■□□□□ 0.17
UBXN1-218ENST00000616865 ZPBP2Q6X784 338 aa16.12■□□□□ 0.17
UBXN1-218ENST00000616865 GOLGA5Q8TBA6 731 aa16.12■□□□□ 0.17
UBXN1-218ENST00000616865 HASPINQ8TF76 798 aa16.12■□□□□ 0.17
UBXN1-218ENST00000616865 PIK3R5Q8WYR1 880 aa16.12■□□□□ 0.17
UBXN1-218ENST00000616865 DHTKD1Q96HY7 919 aaPredicted RBP16.12■□□□□ 0.17
UBXN1-218ENST00000616865 ACO2Q99798 780 aaKnown RBP16.12■□□□□ 0.17
UBXN1-218ENST00000616865 ANP32EQ9BTT0 268 aa16.12■□□□□ 0.17
UBXN1-218ENST00000616865 STRA6Q9BX79 667 aa16.12■□□□□ 0.17
UBXN1-218ENST00000616865 ANKFY1Q9P2R3 1169 aa16.12■□□□□ 0.17
UBXN1-218ENST00000616865 SIT1Q9Y3P8 196 aa16.12■□□□□ 0.17
UBXN1-218ENST00000616865 R4GN57 208 aa16.12■□□□□ 0.17
UBXN1-218ENST00000616865 DOCK6Q96HP0 2047 aa16.12■□□□□ 0.17
UBXN1-218ENST00000616865 GVINP1Q7Z2Y8 2422 aa16.11■□□□□ 0.17
UBXN1-218ENST00000616865 COL4A3Q01955 1670 aa16.11■□□□□ 0.17
UBXN1-218ENST00000616865 PTGESO14684 152 aa16.11■□□□□ 0.17
UBXN1-218ENST00000616865 HNRNPA1P09651 372 aaKnown RBP eCLIP16.11■□□□□ 0.17
UBXN1-218ENST00000616865 HARSP12081 509 aaKnown RBP16.11■□□□□ 0.17
UBXN1-218ENST00000616865 KCNA1Q09470 495 aa16.11■□□□□ 0.17
UBXN1-218ENST00000616865 PSMD5Q16401 504 aa16.11■□□□□ 0.17
UBXN1-218ENST00000616865 ZNF568Q3ZCX4 644 aa16.11■□□□□ 0.17
UBXN1-218ENST00000616865 COBLL1Q53SF7 1204 aa16.11■□□□□ 0.17
UBXN1-218ENST00000616865 SLFN12LQ6IEE8 588 aa16.11■□□□□ 0.17
UBXN1-218ENST00000616865 DCLRE1AQ6PJP8 1040 aa16.11■□□□□ 0.17
UBXN1-218ENST00000616865 GRASPQ7Z6J2 395 aaPredicted RBP16.11■□□□□ 0.17
UBXN1-218ENST00000616865 ST13P5Q8NFI4 369 aaPredicted RBP16.11■□□□□ 0.17
UBXN1-218ENST00000616865 PJA1Q8NG27 643 aa16.11■□□□□ 0.17
UBXN1-218ENST00000616865 LNX1Q8TBB1 728 aaPredicted RBP16.11■□□□□ 0.17
UBXN1-218ENST00000616865 NOC3LQ8WTT2 800 aaKnown RBP16.11■□□□□ 0.17
UBXN1-218ENST00000616865 FGF14Q92915 247 aa16.11■□□□□ 0.17
UBXN1-218ENST00000616865 KCNN1Q92952 543 aa16.11■□□□□ 0.17
UBXN1-218ENST00000616865 CLSTN3Q9BQT9 956 aa16.11■□□□□ 0.17
UBXN1-218ENST00000616865 TTPALQ9BTX7 342 aa16.11■□□□□ 0.17
UBXN1-218ENST00000616865 NAT10Q9H0A0 1025 aaKnown RBP16.11■□□□□ 0.17
UBXN1-218ENST00000616865 CGNQ9P2M7 1197 aaKnown RBP16.11■□□□□ 0.17
UBXN1-218ENST00000616865 CTNND2Q9UQB3 1225 aa16.11■□□□□ 0.17
UBXN1-218ENST00000616865 USP20Q9Y2K6 914 aa16.11■□□□□ 0.17
UBXN1-218ENST00000616865 DMXL1Q9Y485 3027 aa16.11■□□□□ 0.17
UBXN1-218ENST00000616865 DNAH14Q0VDD8 3507 aa16.11■□□□□ 0.17
UBXN1-218ENST00000616865 BICDL2A1A5D9 508 aa16.1■□□□□ 0.17
UBXN1-218ENST00000616865 CLDN3O15551 220 aa16.1■□□□□ 0.17
UBXN1-218ENST00000616865 TOM1L1O75674 476 aa16.1■□□□□ 0.17
UBXN1-218ENST00000616865 PIGRP01833 764 aa16.1■□□□□ 0.17
UBXN1-218ENST00000616865 C8AP07357 584 aa16.1■□□□□ 0.17
UBXN1-218ENST00000616865 BMP6P22004 513 aa16.1■□□□□ 0.17
UBXN1-218ENST00000616865 HOXA9P31269 272 aa16.1■□□□□ 0.17
UBXN1-218ENST00000616865 PAK1Q13153 545 aa16.1■□□□□ 0.17
UBXN1-218ENST00000616865 NAB2Q15742 525 aa16.1■□□□□ 0.17
UBXN1-218ENST00000616865 TPD52L1Q16890 204 aaPredicted RBP16.1■□□□□ 0.17
UBXN1-218ENST00000616865 DPCR1Q3MIW9 517 aa16.1■□□□□ 0.17
UBXN1-218ENST00000616865 FAM171A1Q5VUB5 890 aa16.1■□□□□ 0.17
UBXN1-218ENST00000616865 ARMCX5Q6P1M9 558 aa16.1■□□□□ 0.17
UBXN1-218ENST00000616865 ZC3H14Q6PJT7 736 aaKnown RBP16.1■□□□□ 0.17
UBXN1-218ENST00000616865 MPZL3Q6UWV2 235 aa16.1■□□□□ 0.17
UBXN1-218ENST00000616865 NELFBQ8WX92 580 aa16.1■□□□□ 0.17
UBXN1-218ENST00000616865 POMGNT1Q8WZA1 660 aa16.1■□□□□ 0.17
UBXN1-218ENST00000616865 FOXQ1Q9C009 403 aa16.1■□□□□ 0.17
UBXN1-218ENST00000616865 PDZD7Q9H5P4 517 aa16.1■□□□□ 0.17
UBXN1-218ENST00000616865 SNTG2Q9NY99 539 aa16.1■□□□□ 0.17
UBXN1-218ENST00000616865 CDH7Q9ULB5 785 aa16.1■□□□□ 0.17
UBXN1-218ENST00000616865 TNFSF13BQ9Y275 285 aa16.1■□□□□ 0.17
UBXN1-218ENST00000616865 TTLL13PA6NNM8 815 aa16.09■□□□□ 0.17
UBXN1-218ENST00000616865 PPP1R3GB7ZBB8 358 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms