RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 MPP4Q96JB8 637 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 FAM111AQ96PZ2 611 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 C11orf70Q9BRQ4 267 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 PI4K2AQ9BTU6 479 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 ASCC2Q9H1I8 757 aaPredicted RBP7.05□□□□□ -1.28
LMO3-235ENST00000616247 MANSC1Q9H8J5 431 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 DMAP1Q9NPF5 467 aaPredicted RBP7.05□□□□□ -1.28
LMO3-235ENST00000616247 TAS2R1Q9NYW7 299 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 SLC17A7Q9P2U7 560 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 GRID1Q9ULK0 1009 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 ZNF711Q9Y462 761 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 LAMB4A4D0S4 1761 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 MARF1Q9Y4F3 1742 aaKnown RBP7.05□□□□□ -1.28
LMO3-235ENST00000616247 FAM237BA0A1B0GVD1 139 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 MEI4A8MW99 385 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 G3V3G9 751 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 FCHO1O14526 889 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 BGNP21810 368 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 PSMC4P43686 418 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 DSG1Q02413 1049 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 PPP3CAQ08209 521 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 ZNF543Q08ER8 600 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 CCDC15Q0P6D6 951 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 SMAD1Q15797 465 aaKnown RBP7.05□□□□□ -1.28
LMO3-235ENST00000616247 ATP13A4Q4VNC1 1196 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 PLEKHG4Q58EX7 1191 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 SLC45A4Q5BKX6 768 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 ZC3H12AQ5D1E8 599 aaKnown RBP7.05□□□□□ -1.28
LMO3-235ENST00000616247 DCAF8Q5TAQ9 597 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 DPY19L2P1Q6NXN4 242 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 KBTBD2Q8IY47 623 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 KLHL23Q8NBE8 558 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.05□□□□□ -1.28
LMO3-235ENST00000616247 TRAPPC9Q96Q05 1148 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 CBWD1Q9BRT8 395 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 HERPUD2Q9BSE4 406 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 MAK16Q9BXY0 300 aaKnown RBP7.05□□□□□ -1.28
LMO3-235ENST00000616247 OSBPL8Q9BZF1 889 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 DCLK3Q9C098 648 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 FHDC1Q9C0D6 1143 aaPredicted RBP7.05□□□□□ -1.28
LMO3-235ENST00000616247 HOMER2Q9NSB8 354 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 SRP68Q9UHB9 627 aaKnown RBP7.05□□□□□ -1.28
LMO3-235ENST00000616247 LNPEPQ9UIQ6 1025 aa7.05□□□□□ -1.28
LMO3-235ENST00000616247 SMG5Q9UPR3 1016 aaKnown RBP7.05□□□□□ -1.28
LMO3-235ENST00000616247 CASZ1Q86V15 1759 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 SCN11AQ9UI33 1791 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 ABLIM1O14639 778 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 LPXNO60711 386 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 GAS7O60861 476 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 OR6B1O95007 311 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 EYA4O95677 639 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 SPATA31C1P0DKV0 1188 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 SCNN1DP51172 638 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 AP2B1P63010 937 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 MED21Q13503 144 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 RASA2Q15283 850 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 INTS5Q6P9B9 1019 aaKnown RBP7.04□□□□□ -1.28
LMO3-235ENST00000616247 ALYREFQ86V81 257 aaKnown RBP7.04□□□□□ -1.28
LMO3-235ENST00000616247 ENDOVQ8N8Q3 282 aaKnown RBP7.04□□□□□ -1.28
LMO3-235ENST00000616247 GLIS1Q8NBF1 620 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 MIPOL1Q8TD10 442 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 ZFAND2BQ8WV99 257 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 PRPF31Q8WWY3 499 aaKnown RBP7.04□□□□□ -1.28
LMO3-235ENST00000616247 USP6NLQ92738 828 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 BICD1Q96G01 975 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 SLC13A1Q9BZW2 595 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 LRRC19Q9H756 370 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 TCEAL9Q9UHQ7 104 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 GTPBP10A4D1E9 387 aaKnown RBP7.04□□□□□ -1.28
LMO3-235ENST00000616247 I3L4J1 428 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 UFL1O94874 794 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 SETSIPP0DME0 302 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 GAP43P17677 238 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 MAN1A1P33908 653 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 YWHAGP61981 247 aaKnown RBP eCLIP7.04□□□□□ -1.28
LMO3-235ENST00000616247 TMPRSS15P98073 1019 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 CAV1Q03135 178 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 AP1B1Q10567 949 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 ASPHQ12797 758 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 MOGSQ13724 837 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 TFDP1Q14186 410 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 TRIP10Q15642 601 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 MMEL1Q495T6 779 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 LIN52Q52LA3 116 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 RABGAP1LQ5R372 815 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 ACBD5Q5T8D3 534 aaPredicted RBP7.04□□□□□ -1.28
LMO3-235ENST00000616247 LPCAT4Q643R3 524 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 LMBRD2Q68DH5 695 aaPredicted RBP7.04□□□□□ -1.28
LMO3-235ENST00000616247 C3orf62Q6ZUJ4 267 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 C16orf86Q6ZW13 317 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 CENPUQ71F23 418 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 RHPN2Q8IUC4 686 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 ARID3BQ8IVW6 561 aaPredicted RBP7.04□□□□□ -1.28
LMO3-235ENST00000616247 BBOF1Q8ND07 529 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 ZSWIM2Q8NEG5 633 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 EPS8L1Q8TE68 723 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 FAM210AQ96ND0 272 aa7.04□□□□□ -1.28
LMO3-235ENST00000616247 ADGRA3Q8IWK6 1321 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 FAM86B1E9PN63 330 aa7.03□□□□□ -1.28
LMO3-235ENST00000616247 SPECC1L-ADORA2AF8WAN1 911 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms