RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.92□□□□□ -0.18
MSH6-214ENST00000616033 ATL2Q8NHH9 583 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 KREMEN1Q96MU8 473 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 MAK16Q9BXY0 300 aaKnown RBP13.92□□□□□ -0.18
MSH6-214ENST00000616033 DCLK3Q9C098 648 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 SLC17A7Q9P2U7 560 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 MYH14Q7Z406 1995 aaKnown RBP13.92□□□□□ -0.18
MSH6-214ENST00000616033 MAP3K7O43318 606 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 ASMTLO95671 621 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 AMPD1P23109 780 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 SP4Q02446 784 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 KIF22Q14807 665 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 GPATCH4Q5T3I0 446 aaKnown RBP13.92□□□□□ -0.18
MSH6-214ENST00000616033 DNAJC14Q6Y2X3 702 aaPredicted RBP13.92□□□□□ -0.18
MSH6-214ENST00000616033 C4orf50Q6ZRC1 276 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 RBM41Q96IZ5 413 aaKnown RBP13.92□□□□□ -0.18
MSH6-214ENST00000616033 SMYD3Q9H7B4 428 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 PCMTD2Q9NV79 361 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 hCG_1984214I3L0E3 225 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 SGK1O00141 431 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 EDF1O60869 148 aaKnown RBP13.92□□□□□ -0.18
MSH6-214ENST00000616033 ALAS1P13196 640 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 CYP11B1P15538 503 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 TNFAIP8L3Q5GJ75 292 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 CCDC62Q6P9F0 684 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 CLNKQ7Z7G1 428 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 TRABD2AQ86V40 505 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 TRIM42Q8IWZ5 723 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 ZC3H3Q8IXZ2 948 aaKnown RBP13.92□□□□□ -0.18
MSH6-214ENST00000616033 ZNF713Q8N859 430 aaPredicted RBP13.92□□□□□ -0.18
MSH6-214ENST00000616033 SEMA4DQ92854 862 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 GRAMD1AQ96CP6 724 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 GTPBP10A4D1E9 387 aaKnown RBP13.91□□□□□ -0.18
MSH6-214ENST00000616033 ARFIP2P53365 341 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 CLUL1Q15846 466 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 SLC5A9Q2M3M2 681 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 SGSM1Q2NKQ1 1148 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 RINLQ6ZS11 566 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 STXBP4Q6ZWJ1 553 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 ZNF333Q96JL9 665 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 AMNQ9BXJ7 453 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 LRRC19Q9H756 370 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 ATF5Q9Y2D1 282 aaPredicted RBP13.91□□□□□ -0.18
MSH6-214ENST00000616033 DOT1LQ8TEK3 1739 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 ANXA13P27216 316 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 PGM1P36871 562 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 YARSP54577 528 aaKnown RBP13.91□□□□□ -0.18
MSH6-214ENST00000616033 PEX3P56589 373 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 STAT4Q14765 748 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 BBS9Q3SYG4 887 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 FOXB2Q5VYV0 432 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 OLFML2BQ68BL8 750 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 EFCAB3Q8N7B9 438 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 TCP10LQ8TDR4 215 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 POMGNT1Q8WZA1 660 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 CCDC124Q96CT7 223 aaKnown RBP13.91□□□□□ -0.18
MSH6-214ENST00000616033 SYT11Q9BT88 431 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 GINM1Q9NU53 330 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 DNPEPQ9ULA0 475 aa13.91□□□□□ -0.18
MSH6-214ENST00000616033 ARHGAP42A6NI28 874 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 ATP5HO75947 161 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 IVDP26440 423 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 GSTT1P30711 240 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 SOX10P56693 466 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 ACBD5Q5T8D3 534 aaPredicted RBP13.9□□□□□ -0.18
MSH6-214ENST00000616033 IZUMO2Q6UXV1 221 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 PLEKHO2Q8TD55 490 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 FBXO41Q8TF61 875 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 BICD1Q96G01 975 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 CFAP57Q96MR6 1250 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 THTPAQ9BU02 230 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 NYXQ9GZU5 481 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 GALNT8Q9NY28 637 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 WDR35Q9P2L0 1181 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 B2RBV5 119 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 GGPS1O95749 300 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 CYP3A4P08684 503 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 GAP43P17677 238 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 NRLP54845 237 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 TAS2R40P59535 323 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 NR1H3Q13133 447 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 TFDP1Q14186 410 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 PARP6Q2NL67 630 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 C1orf186Q6ZWK4 172 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 MFN1Q8IWA4 741 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 CCDC89Q8N998 374 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 TAS1R2Q8TE23 839 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 GRK7Q8WTQ7 553 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 C10orf82Q8WW14 230 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 LXNQ9BS40 222 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 TMEM121Q9BTD3 319 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 OSBPL8Q9BZF1 889 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 TMX4Q9H1E5 349 aaPredicted RBP13.9□□□□□ -0.18
MSH6-214ENST00000616033 DNAAF2Q9NVR5 837 aaKnown RBP13.9□□□□□ -0.18
MSH6-214ENST00000616033 CHMP2BQ9UQN3 213 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 STARD13Q9Y3M8 1113 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 CREB3O43889 395 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 HLA-DOAP06340 250 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 SETSIPP0DME0 302 aa13.9□□□□□ -0.18
MSH6-214ENST00000616033 TCF4P15884 667 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms