RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 ACADLP28330 430 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 LENG1Q96BZ8 264 aaPredicted RBP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 KDM4CQ9H3R0 1056 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 GPC6Q9Y625 555 aaPredicted RBP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 MSH3P20585 1137 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 ITGA3P26006 1051 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 PIK3C3Q8NEB9 887 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 SYMPKQ92797 1274 aaKnown RBP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 VPS39Q96JC1 886 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 IGF2BP3O00425 579 aaKnown RBP eCLIP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 RB1P06400 928 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 KITP10721 976 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 PLCG1P19174 1290 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 NFIL3Q16649 462 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 DPCR1Q3MIW9 517 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 PCYOX1LQ8NBM8 494 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 RBBP8NLQ8NC74 664 aaPredicted RBP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 THRAP3Q9Y2W1 955 aaKnown RBP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 MAP2P11137 1827 aaKnown RBP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 UTYO14607 1347 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 ALDH1B1P30837 517 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 PKN2Q16513 984 aaKnown RBP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 FAAH2Q6GMR7 532 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 CCSAPQ6IQ19 270 aaPredicted RBP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 SGSM3Q96HU1 749 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 CITED4Q96RK1 184 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 SYNGAP1Q96PV0 1343 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 FDPSP14324 419 aaKnown RBP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 RPS8P62241 208 aaKnown RBP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 TCEAL5Q5H9L2 206 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 BBS5Q8N3I7 341 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 MRPL44Q9H9J2 332 aaKnown RBP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 C5orf58C9J3I9 102 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 CLTBP09497 229 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 CAPZA2P47755 286 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 AP1S1P61966 158 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 SETD3Q86TU7 594 aaPredicted RBP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 PNMA1Q8ND90 353 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 PCDHA12Q9UN75 941 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 CLTCQ00610 1675 aaKnown RBP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 C1orf232A0A0U1RR37 186 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 RGS10O43665 173 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 APOC1P02654 83 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 HSD3B2P26439 372 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 BPIFB4P59827 614 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 KNOP1Q1ED39 458 aaKnown RBP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 HERC4Q5GLZ8 1057 aaPredicted RBP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 SYTL1Q8IYJ3 562 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 PLA2G12BQ9BX93 195 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 COL3A1P02461 1466 aaPredicted RBP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 TRIM43BA6NCK2 446 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 NPR3P17342 541 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 NAA35Q5VZE5 725 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 TBC1D19Q8N5T2 526 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 ZNF473Q8WTR7 871 aaKnown RBP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 HSPH1Q92598 858 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 LARP4BQ92615 738 aaKnown RBP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 AIF1LQ9BQI0 150 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 ZNF222Q9UK12 451 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 NFU1Q9UMS0 254 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 RUVBL2Q9Y230 463 aaKnown RBP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 CPS1P31327 1500 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 POTEMA6NI47 508 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 HADHAP40939 763 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 SLC1A4P43007 532 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 POTEHQ6S545 545 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 POTEGQ6S5H5 508 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 KCNB2Q92953 911 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 CLP1Q92989 425 aaKnown RBP9.7□□□□□ -0.86
COL12A1-211ENST00000615798 CYFIP2Q96F07 1278 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 NUP50Q9UKX7 468 aa9.7□□□□□ -0.86
COL12A1-211ENST00000615798 KLHL41O60662 606 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 RXRAP19793 462 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 RFX1P22670 979 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 ARL4CP56559 192 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 NFYCQ13952 458 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 GCOM2Q9BZD3 368 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-211ENST00000615798 ABCG2Q9UNQ0 655 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 IVNS1ABPQ9Y6Y0 642 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 PTPREP23469 700 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 ZNF57Q68EA5 555 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-211ENST00000615798 HMBOX1Q6NT76 420 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 P3H2Q8IVL5 708 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 PDIK1LQ8N165 341 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 FLAD1Q8NFF5 587 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 AVENQ9NQS1 362 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-211ENST00000615798 ERCC6L2Q5T890 1561 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 A0A0X1KG70 313 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 BTBD18B2RXH4 712 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 ATF6P18850 670 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 TYSND1Q2T9J0 566 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 TRAPPC3LQ5T215 181 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 FAM162AQ96A26 154 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 SIPA1Q96FS4 1042 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 GGA2Q9UJY4 613 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 PYCARDQ9ULZ3 195 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 TCHHL1Q5QJ38 904 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-211ENST00000615798 PPP1R14AQ96A00 147 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 VPS54Q9P1Q0 977 aa9.69□□□□□ -0.86
COL12A1-211ENST00000615798 BNIP1Q12981 228 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms