RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 NCKAP1LP55160 1127 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 OXCT1P55809 520 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 GSTO1P78417 241 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 VAC14Q08AM6 782 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 PTPN21Q16825 1174 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 ANKDD1AQ495B1 522 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 RTL3Q8N8U3 475 aaKnown RBP5.18□□□□□ -1.58
VPS13D-213ENST00000613099 ENKURQ8TC29 256 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 P2RX5Q93086 422 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 MND1Q9BWT6 205 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 OSBPL11Q9BXB4 747 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 STARD13Q9Y3M8 1113 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 SRPRBQ9Y5M8 271 aaKnown RBP5.18□□□□□ -1.58
VPS13D-213ENST00000613099 A2MP01023 1474 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 A0A087WWV3 80 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 PPP2R5CQ13362 524 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 DGKKQ5KSL6 1271 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 AAGABQ6PD74 315 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 CYP4V2Q6ZWL3 525 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-213ENST00000613099 ATL1Q8WXF7 558 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 BTBD9Q96Q07 612 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 CLK4Q9HAZ1 481 aaKnown RBP5.18□□□□□ -1.58
VPS13D-213ENST00000613099 ZNF221Q9UK13 617 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 PARP4Q9UKK3 1724 aaKnown RBP5.18□□□□□ -1.58
VPS13D-213ENST00000613099 APOL3O95236 402 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 GJA9P57773 515 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 FOLH1Q04609 750 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 SULT2A1Q06520 285 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 LSAMPQ13449 338 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 OTUD7BQ6GQQ9 843 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 L3MBTL3Q96JM7 780 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-213ENST00000613099 AIFM3Q96NN9 605 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 TUBA1CQ9BQE3 449 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 NDST4Q9H3R1 872 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 KIAA1586Q9HCI6 787 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 ING3Q9NXR8 418 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 ZNF185O15231 689 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 PRPF3O43395 683 aaKnown RBP5.18□□□□□ -1.58
VPS13D-213ENST00000613099 ITIH1P19827 911 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 PMLP29590 882 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 EXOC3L4Q17RC7 722 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 FAM213AQ9BRX8 229 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 DCUN1D5Q9BTE7 237 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 BLZF1Q9H2G9 400 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 EPB41L4AQ9HCS5 686 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-213ENST00000613099 PRAG1Q86YV5 1406 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 GFPT2O94808 682 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 PDE4BQ07343 736 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 DEPDC1Q5TB30 811 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 SYDE2Q5VT97 1194 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 ZNF530Q6P9A1 599 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-213ENST00000613099 ATG14Q6ZNE5 492 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 CLVS1Q8IUQ0 354 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-213ENST00000613099 NEDD1Q8NHV4 660 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 CDH19Q9H159 772 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 DBR1Q9UK59 544 aaKnown RBP5.18□□□□□ -1.58
VPS13D-213ENST00000613099 SLX4Q8IY92 1834 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 KANSL1LA0AUZ9 987 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 TTC26A0AVF1 554 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 ZNF806P0C7X5 589 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 PDIA3P30101 505 aaKnown RBP5.18□□□□□ -1.58
VPS13D-213ENST00000613099 RASA2Q15283 850 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 TTMPQ5BVD1 217 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 SPARTQ8N0X7 666 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 TMEM79Q9BSE2 394 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 TMEM245Q9H330 911 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 EHD1Q9H4M9 534 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 PAG1Q9NWQ8 432 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 VANGL2Q9ULK5 521 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 SH3PXD2BA1X283 911 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 TTC34A8MYJ7 566 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 P4HA1P13674 534 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 UQCRBP14927 111 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 PSMC6P62333 389 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 RABL6Q3YEC7 729 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-213ENST00000613099 MICALL2Q8IY33 904 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 ALDH16A1Q8IZ83 802 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 SNX31Q8N9S9 440 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 ZNF398Q8TD17 642 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 HNRNPABQ99729 332 aaKnown RBP5.18□□□□□ -1.58
VPS13D-213ENST00000613099 TAS2R1Q9NYW7 299 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 KRT1P04264 644 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 MYL6BP14649 208 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 PROM2Q8N271 834 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 OR7G1Q8NGA0 311 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 FAM170AA1A519 330 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 FKBP3Q00688 224 aaKnown RBP5.18□□□□□ -1.58
VPS13D-213ENST00000613099 PRKG1Q13976 671 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 BOLA3Q53S33 107 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 ZBTB49Q6ZSB9 765 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 KRT74Q7RTS7 529 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 DGLUCYQ7Z3D6 616 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 SFRP1Q8N474 314 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 APBB2Q92870 758 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 MAGEE1Q9HCI5 957 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 KIAA0232Q92628 1395 aa5.18□□□□□ -1.58
VPS13D-213ENST00000613099 MADDQ8WXG6 1647 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 FBP2O00757 339 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 LPXNO60711 386 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 SIN3BO75182 1162 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms