RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 PDZD7Q9H5P4 517 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 GOLGA2P5Q9HBQ8 144 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 PRMT7Q9NVM4 692 aaPredicted RBP11.33□□□□□ -0.6
SSX3-204ENST00000612497 FBXL5Q9UKA1 691 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 NUP210Q8TEM1 1887 aaPredicted RBP11.33□□□□□ -0.6
SSX3-204ENST00000612497 NAV2Q8IVL1 2488 aa11.33□□□□□ -0.6
SSX3-204ENST00000612497 MEFVO15553 781 aaPredicted RBP11.32□□□□□ -0.6
SSX3-204ENST00000612497 SLC37A4O43826 429 aa11.32□□□□□ -0.6
SSX3-204ENST00000612497 MARCH6O60337 910 aa11.32□□□□□ -0.6
SSX3-204ENST00000612497 RNF40O75150 1001 aa11.32□□□□□ -0.6
SSX3-204ENST00000612497 DGAT1O75907 488 aa11.32□□□□□ -0.6
SSX3-204ENST00000612497 APBB3O95704 486 aa11.32□□□□□ -0.6
SSX3-204ENST00000612497 CAPNS1P04632 268 aa11.32□□□□□ -0.6
SSX3-204ENST00000612497 MAPK8P45983 427 aa11.32□□□□□ -0.6
SSX3-204ENST00000612497 PLCB2Q00722 1185 aa11.32□□□□□ -0.6
SSX3-204ENST00000612497 SCAPQ12770 1279 aa11.32□□□□□ -0.6
SSX3-204ENST00000612497 CTXN3Q4LDR2 81 aa11.32□□□□□ -0.6
SSX3-204ENST00000612497 TMEM196Q5HYL7 178 aa11.32□□□□□ -0.6
SSX3-204ENST00000612497 RNF20Q5VTR2 975 aa11.32□□□□□ -0.6
SSX3-204ENST00000612497 NCAPH2Q6IBW4 605 aa11.32□□□□□ -0.6
SSX3-204ENST00000612497 PPP4R3AQ6IN85 833 aa11.32□□□□□ -0.6
SSX3-204ENST00000612497 FSTL4Q6MZW2 842 aa11.32□□□□□ -0.6
SSX3-204ENST00000612497 HNRNPLLQ8WVV9 542 aaKnown RBP11.32□□□□□ -0.6
SSX3-204ENST00000612497 PRIMPOLQ96LW4 560 aa11.32□□□□□ -0.6
SSX3-204ENST00000612497 FAM20AQ96MK3 541 aa11.32□□□□□ -0.6
SSX3-204ENST00000612497 CCDC43Q96MW1 224 aaKnown RBP11.32□□□□□ -0.6
SSX3-204ENST00000612497 PPP1R10Q96QC0 940 aaKnown RBP11.32□□□□□ -0.6
SSX3-204ENST00000612497 ADPGKQ9BRR6 497 aa11.32□□□□□ -0.6
SSX3-204ENST00000612497 SLC26A6Q9BXS9 759 aa11.32□□□□□ -0.6
SSX3-204ENST00000612497 POLR3FQ9H1D9 316 aaPredicted RBP11.32□□□□□ -0.6
SSX3-204ENST00000612497 AFF4Q9UHB7 1163 aaKnown RBP11.32□□□□□ -0.6
SSX3-204ENST00000612497 ZNF638Q14966 1978 aaKnown RBP11.31□□□□□ -0.6
SSX3-204ENST00000612497 TTLL13PA6NNM8 815 aa11.31□□□□□ -0.6
SSX3-204ENST00000612497 H0Y626 953 aa11.31□□□□□ -0.6
SSX3-204ENST00000612497 SYN3O14994 580 aa11.31□□□□□ -0.6
SSX3-204ENST00000612497 TRIM16O95361 564 aa11.31□□□□□ -0.6
SSX3-204ENST00000612497 EGFP01133 1207 aa11.31□□□□□ -0.6
SSX3-204ENST00000612497 CPB1P15086 417 aa11.31□□□□□ -0.6
SSX3-204ENST00000612497 DGKEP52429 567 aa11.31□□□□□ -0.6
SSX3-204ENST00000612497 LMAN2Q12907 356 aa11.31□□□□□ -0.6
SSX3-204ENST00000612497 PRPF4BQ13523 1007 aaKnown RBP11.31□□□□□ -0.6
SSX3-204ENST00000612497 PMS2CLQ68D20 193 aa11.31□□□□□ -0.6
SSX3-204ENST00000612497 ZBTB8OSQ8IWT0 167 aa11.31□□□□□ -0.6
SSX3-204ENST00000612497 GLIS3Q8NEA6 775 aa11.31□□□□□ -0.6
SSX3-204ENST00000612497 ADAM32Q8TC27 787 aa11.31□□□□□ -0.6
SSX3-204ENST00000612497 BPIFB1Q8TDL5 484 aa11.31□□□□□ -0.6
SSX3-204ENST00000612497 PIGKQ92643 395 aa11.31□□□□□ -0.6
SSX3-204ENST00000612497 LRIG1Q96JA1 1093 aa11.31□□□□□ -0.6
SSX3-204ENST00000612497 ANO2Q9NQ90 1003 aa11.31□□□□□ -0.6
SSX3-204ENST00000612497 THG1LQ9NWX6 298 aaKnown RBP11.31□□□□□ -0.6
SSX3-204ENST00000612497 MAFFQ9ULX9 164 aa11.31□□□□□ -0.6
SSX3-204ENST00000612497 PCDHA4Q9UN74 947 aa11.31□□□□□ -0.6
SSX3-204ENST00000612497 USP20Q9Y2K6 914 aa11.31□□□□□ -0.6
SSX3-204ENST00000612497 SHROOM3Q8TF72 1996 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 FAM221BA6H8Z2 402 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 TRDMT1O14717 391 aaKnown RBP11.3□□□□□ -0.6
SSX3-204ENST00000612497 LIG1P18858 919 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 DHPSP49366 369 aaPredicted RBP11.3□□□□□ -0.6
SSX3-204ENST00000612497 EPHB3P54753 998 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 MRPL58Q14197 206 aaKnown RBP11.3□□□□□ -0.6
SSX3-204ENST00000612497 INF2Q27J81 1249 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 USP39Q53GS9 565 aaKnown RBP11.3□□□□□ -0.6
SSX3-204ENST00000612497 GPR158Q5T848 1215 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 RNF19BQ6ZMZ0 732 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 MAEAQ7L5Y9 396 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 C11orf74Q86VG3 221 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 TMC8Q8IU68 726 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 SPDYE1Q8NFV5 336 aaPredicted RBP11.3□□□□□ -0.6
SSX3-204ENST00000612497 RPLP0P6Q8NHW5 317 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 NUSAP1Q9BXS6 441 aaKnown RBP11.3□□□□□ -0.6
SSX3-204ENST00000612497 LRRC3Q9BY71 257 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 RNF26Q9BY78 433 aaPredicted RBP11.3□□□□□ -0.6
SSX3-204ENST00000612497 ATXN3LQ9H3M9 355 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 FZD8Q9H461 694 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 KCNMB3Q9NPA1 279 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 SH3GLB2Q9NR46 395 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 GKN1Q9NS71 199 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 OBP2AQ9NY56 170 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 EBF1Q9UH73 591 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 TPCN1Q9ULQ1 816 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 YIPF1Q9Y548 306 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 NUB1Q9Y5A7 615 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 ADAMTS9Q9P2N4 1935 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 APC2O95996 2303 aa11.3□□□□□ -0.6
SSX3-204ENST00000612497 URB1O60287 2271 aaKnown RBP11.29□□□□□ -0.6
SSX3-204ENST00000612497 CCDC194A0A1B0GVG4 234 aa11.29□□□□□ -0.6
SSX3-204ENST00000612497 PODXLO00592 558 aa11.29□□□□□ -0.6
SSX3-204ENST00000612497 SLITRK3O94933 977 aa11.29□□□□□ -0.6
SSX3-204ENST00000612497 PRAMEF12O95522 483 aa11.29□□□□□ -0.6
SSX3-204ENST00000612497 MCM2P49736 904 aa11.29□□□□□ -0.6
SSX3-204ENST00000612497 SOX4Q06945 474 aaPredicted RBP11.29□□□□□ -0.6
SSX3-204ENST00000612497 C19orf57Q0VDD7 668 aa11.29□□□□□ -0.6
SSX3-204ENST00000612497 PLD1Q13393 1074 aa11.29□□□□□ -0.6
SSX3-204ENST00000612497 DMC1Q14565 340 aa11.29□□□□□ -0.6
SSX3-204ENST00000612497 MAPK6Q16659 721 aa11.29□□□□□ -0.6
SSX3-204ENST00000612497 FAM187BQ17R55 369 aa11.29□□□□□ -0.6
SSX3-204ENST00000612497 DCAF4L1Q3SXM0 396 aa11.29□□□□□ -0.6
SSX3-204ENST00000612497 ARHGAP15Q53QZ3 475 aa11.29□□□□□ -0.6
SSX3-204ENST00000612497 TRIM61Q5EBN2 209 aa11.29□□□□□ -0.6
SSX3-204ENST00000612497 EEF1DP3Q658K8 133 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms