RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 ARHGAP20Q9P2F6 1191 aa18.81■□□□□ 0.6
SREK1-216ENST00000612404 CACNG4Q9UBN1 327 aa18.81■□□□□ 0.6
SREK1-216ENST00000612404 TDRD15B5MCY1 1934 aaKnown RBP18.81■□□□□ 0.6
SREK1-216ENST00000612404 TTC3P53804 2025 aa18.81■□□□□ 0.6
SREK1-216ENST00000612404 MICAL3Q7RTP6 2002 aa18.81■□□□□ 0.6
SREK1-216ENST00000612404 PIRO00625 290 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 WEE2P0C1S8 567 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 CCDC172P0C7W6 258 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 LRPAP1P30533 357 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 CDK17Q00537 523 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 NOMO2Q5JPE7 1267 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 HGSNATQ68CP4 663 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.8■□□□□ 0.6
SREK1-216ENST00000612404 FAM71AQ8IYT1 594 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 ZNF560Q96MR9 790 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 DEF6Q9H4E7 631 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 PCDHB4Q9Y5E5 795 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 CYP26A1O43174 497 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 STAU1O95793 577 aaKnown RBP18.8■□□□□ 0.6
SREK1-216ENST00000612404 ACRP10323 421 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 EIF4A3P38919 411 aaKnown RBP18.8■□□□□ 0.6
SREK1-216ENST00000612404 PNPLA4P41247 253 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 RAP1GAPP47736 663 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 RAD9BQ6WBX8 426 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 RABGGTAQ92696 567 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 JAKMIP2Q96AA8 810 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 CCDC42Q96M95 316 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 HAUS4Q9H6D7 363 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 RNF216Q9NWF9 866 aaPredicted RBP18.8■□□□□ 0.6
SREK1-216ENST00000612404 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.8■□□□□ 0.6
SREK1-216ENST00000612404 SNX9Q9Y5X1 595 aa18.8■□□□□ 0.6
SREK1-216ENST00000612404 INPPL1O15357 1258 aa18.79■□□□□ 0.6
SREK1-216ENST00000612404 UPP2O95045 317 aa18.79■□□□□ 0.6
SREK1-216ENST00000612404 CLCNKBP51801 687 aa18.79■□□□□ 0.6
SREK1-216ENST00000612404 RNASELQ05823 741 aaKnown RBP18.79■□□□□ 0.6
SREK1-216ENST00000612404 TMEM270Q6UE05 265 aa18.79■□□□□ 0.6
SREK1-216ENST00000612404 NPAS4Q8IUM7 802 aa18.79■□□□□ 0.6
SREK1-216ENST00000612404 ABHD8Q96I13 439 aa18.79■□□□□ 0.6
SREK1-216ENST00000612404 SMYD3Q9H7B4 428 aa18.79■□□□□ 0.6
SREK1-216ENST00000612404 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.79■□□□□ 0.6
SREK1-216ENST00000612404 BZW2Q9Y6E2 419 aaKnown RBP18.79■□□□□ 0.6
SREK1-216ENST00000612404 PODXLO00592 558 aa18.79■□□□□ 0.6
SREK1-216ENST00000612404 TAF6P49848 677 aa18.79■□□□□ 0.6
SREK1-216ENST00000612404 GATMP50440 423 aa18.79■□□□□ 0.6
SREK1-216ENST00000612404 PTK2Q05397 1052 aa18.79■□□□□ 0.6
SREK1-216ENST00000612404 HTATIP2Q9BUP3 242 aa18.79■□□□□ 0.6
SREK1-216ENST00000612404 BCO2Q9BYV7 579 aa18.79■□□□□ 0.6
SREK1-216ENST00000612404 CISHQ9NSE2 258 aa18.79■□□□□ 0.6
SREK1-216ENST00000612404 KANSL3Q9P2N6 904 aa18.79■□□□□ 0.6
SREK1-216ENST00000612404 ABHD14A-ACY1A0A1B0GW23 586 aa18.78■□□□□ 0.6
SREK1-216ENST00000612404 HOXA2O43364 376 aa18.78■□□□□ 0.6
SREK1-216ENST00000612404 PFKMP08237 780 aa18.78■□□□□ 0.6
SREK1-216ENST00000612404 ACO1P21399 889 aaKnown RBP18.78■□□□□ 0.6
SREK1-216ENST00000612404 PRKCIP41743 596 aa18.78■□□□□ 0.6
SREK1-216ENST00000612404 CDH8P55286 799 aa18.78■□□□□ 0.6
SREK1-216ENST00000612404 TUSC3Q13454 348 aa18.78■□□□□ 0.6
SREK1-216ENST00000612404 SV2CQ496J9 727 aa18.78■□□□□ 0.6
SREK1-216ENST00000612404 ZSCAN30Q86W11 494 aa18.78■□□□□ 0.6
SREK1-216ENST00000612404 BADQ92934 168 aa18.78■□□□□ 0.6
SREK1-216ENST00000612404 FAXDC2Q96IV6 333 aa18.78■□□□□ 0.6
SREK1-216ENST00000612404 PAAF1Q9BRP4 392 aa18.78■□□□□ 0.6
SREK1-216ENST00000612404 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.78■□□□□ 0.6
SREK1-216ENST00000612404 IL23AQ9NPF7 189 aa18.78■□□□□ 0.6
SREK1-216ENST00000612404 CCDC85CA6NKD9 419 aa18.77■□□□□ 0.6
SREK1-216ENST00000612404 KPNA7A9QM74 516 aa18.77■□□□□ 0.6
SREK1-216ENST00000612404 SPTLC1O15269 473 aa18.77■□□□□ 0.6
SREK1-216ENST00000612404 RPL9P32969 192 aaKnown RBP18.77■□□□□ 0.6
SREK1-216ENST00000612404 CLCN1P35523 988 aa18.77■□□□□ 0.6
SREK1-216ENST00000612404 CYLC1P35663 651 aaPredicted RBP18.77■□□□□ 0.6
SREK1-216ENST00000612404 LILRA4P59901 499 aa18.77■□□□□ 0.6
SREK1-216ENST00000612404 YWHAEP62258 255 aaKnown RBP18.77■□□□□ 0.6
SREK1-216ENST00000612404 TOGARAM2Q6ZUX3 1019 aa18.77■□□□□ 0.6
SREK1-216ENST00000612404 SLC47A2Q86VL8 602 aa18.77■□□□□ 0.6
SREK1-216ENST00000612404 CCDC170Q8IYT3 715 aa18.77■□□□□ 0.6
SREK1-216ENST00000612404 DESI2Q9BSY9 194 aa18.77■□□□□ 0.6
SREK1-216ENST00000612404 ACP6Q9NPH0 428 aa18.77■□□□□ 0.6
SREK1-216ENST00000612404 TBC1D13Q9NVG8 400 aa18.77■□□□□ 0.6
SREK1-216ENST00000612404 LAMA2P24043 3122 aaKnown RBP18.77■□□□□ 0.6
SREK1-216ENST00000612404 AKR1B10O60218 316 aa18.77■□□□□ 0.6
SREK1-216ENST00000612404 SYN1P17600 705 aa18.77■□□□□ 0.6
SREK1-216ENST00000612404 UPP1Q16831 310 aa18.77■□□□□ 0.6
SREK1-216ENST00000612404 ZNF394Q53GI3 561 aa18.77■□□□□ 0.6
SREK1-216ENST00000612404 ZNF571Q7Z3V5 609 aaPredicted RBP18.77■□□□□ 0.6
SREK1-216ENST00000612404 ZNF280BQ86YH2 543 aa18.77■□□□□ 0.6
SREK1-216ENST00000612404 CRIPAKQ8N1N5 446 aa18.77■□□□□ 0.6
SREK1-216ENST00000612404 RBBP8NLQ8NC74 664 aaPredicted RBP18.77■□□□□ 0.6
SREK1-216ENST00000612404 FAM193BQ96PV7 902 aaPredicted RBP18.77■□□□□ 0.6
SREK1-216ENST00000612404 SDCBP2Q9H190 292 aa18.77■□□□□ 0.6
SREK1-216ENST00000612404 SPTLC3Q9NUV7 552 aa18.77■□□□□ 0.6
SREK1-216ENST00000612404 EPN1Q9Y6I3 576 aaPredicted RBP18.77■□□□□ 0.6
SREK1-216ENST00000612404 SSU72P8A0A1W2PR75 194 aa18.76■□□□□ 0.59
SREK1-216ENST00000612404 NDUFA10O95299 355 aa18.76■□□□□ 0.59
SREK1-216ENST00000612404 MSNP26038 577 aaKnown RBP18.76■□□□□ 0.59
SREK1-216ENST00000612404 KIF11P52732 1056 aa18.76■□□□□ 0.59
SREK1-216ENST00000612404 FPGSQ05932 587 aa18.76■□□□□ 0.59
SREK1-216ENST00000612404 MAPK8IP2Q13387 824 aaPredicted RBP18.76■□□□□ 0.59
SREK1-216ENST00000612404 PPIGQ13427 754 aaKnown RBP eCLIP18.76■□□□□ 0.595e-11■■■□□ 15.8
SREK1-216ENST00000612404 OTOP2Q7RTS6 562 aa18.76■□□□□ 0.59
SREK1-216ENST00000612404 UBR7Q8N806 425 aa18.76■□□□□ 0.59
SREK1-216ENST00000612404 DDX27Q96GQ7 796 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms