RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 RNPC3Q96LT9 517 aaKnown RBP12.95□□□□□ -0.34
HLCS-207ENST00000612277 DDX18Q9NVP1 670 aaKnown RBP12.95□□□□□ -0.34
HLCS-207ENST00000612277 TMCC3Q9ULS5 477 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 TPST1O60507 370 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 TBXAS1P24557 533 aaPredicted RBP12.95□□□□□ -0.34
HLCS-207ENST00000612277 SPANXN2Q5MJ10 180 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 TYW3Q6IPR3 259 aaKnown RBP12.95□□□□□ -0.34
HLCS-207ENST00000612277 UNC13DQ70J99 1090 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 CYP4Z2PQ8N1L4 340 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 MNTQ99583 582 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 LOC100653049A0A140TA62 436 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 KRT34O76011 436 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 RESTQ13127 1097 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 TNFAIP1Q13829 316 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 RUNDC3AQ59EK9 446 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 CDC73Q6P1J9 531 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 PGBD2Q6P3X8 592 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 VN1R5Q7Z5H4 357 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 RFFLQ8WZ73 363 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 PPP2R3CQ969Q6 453 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 ATP6V1HQ9UI12 483 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 PKP3Q9Y446 797 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 FARP1Q9Y4F1 1045 aaPredicted RBP12.95□□□□□ -0.34
HLCS-207ENST00000612277 USP19O94966 1318 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 FCGR1AP12314 374 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 SLC1A1P43005 524 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 NCKAP1LP55160 1127 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 ZNF394Q53GI3 561 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 TMEM63BQ5T3F8 832 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 PID1Q7Z2X4 250 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 CYP4Z1Q86W10 505 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 C10orf53Q8N6V4 93 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 SHCBP1Q8NEM2 672 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 CDHR1Q96JP9 859 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 TRIM62Q9BVG3 475 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 KIAA1586Q9HCI6 787 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 XPO7Q9UIA9 1087 aaKnown RBP12.95□□□□□ -0.34
HLCS-207ENST00000612277 MYO3BQ8WXR4 1341 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 CCDC162PA2VCL2 907 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 SASH1O94885 1247 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 ATP6V1G2O95670 118 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 WARSP23381 471 aaKnown RBP12.94□□□□□ -0.34
HLCS-207ENST00000612277 LRRC24Q50LG9 513 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 EPHX4Q8IUS5 362 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 INTS2Q9H0H0 1204 aaKnown RBP12.94□□□□□ -0.34
HLCS-207ENST00000612277 PARVAQ9NVD7 372 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 GRID1Q9ULK0 1009 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 KCNN4O15554 427 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 SCTRP47872 440 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 GJA8P48165 433 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 ZNF235Q14590 738 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 ARL6IP4Q66PJ3 421 aaKnown RBP12.94□□□□□ -0.34
HLCS-207ENST00000612277 TRIM72Q6ZMU5 477 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 TTC30AQ86WT1 665 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 RBM15Q96T37 977 aaKnown RBP eCLIP12.94□□□□□ -0.344e-6■■□□□ 13.2
HLCS-207ENST00000612277 YIPF2Q9BWQ6 316 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 DHX35Q9H5Z1 703 aaKnown RBP12.94□□□□□ -0.34
HLCS-207ENST00000612277 CD109Q6YHK3 1445 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 A8MXQ7 604 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 TNPO2O14787 897 aaKnown RBP12.94□□□□□ -0.34
HLCS-207ENST00000612277 THRAP10827 490 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 S100A1P23297 94 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 STAT5AP42229 794 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 STARP49675 285 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 STAT5BP51692 787 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 BNC2Q6ZN30 1099 aaPredicted RBP12.94□□□□□ -0.34
HLCS-207ENST00000612277 EPB41L4AQ9HCS5 686 aaPredicted RBP12.94□□□□□ -0.34
HLCS-207ENST00000612277 FKBP6O75344 327 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 H2AFYO75367 372 aaKnown RBP12.94□□□□□ -0.34
HLCS-207ENST00000612277 SKAP2O75563 359 aaPredicted RBP12.94□□□□□ -0.34
HLCS-207ENST00000612277 GNA15P30679 374 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 CCNI2Q6ZMN8 369 aaPredicted RBP12.94□□□□□ -0.34
HLCS-207ENST00000612277 PTPRN2Q92932 1015 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 AP5M1Q9H0R1 490 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 POLG2Q9UHN1 485 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 ZBTB39O15060 712 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 RAD51BO15315 384 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 IDI1Q13907 227 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 DDR2Q16832 855 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 PCNX4Q63HM2 1172 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 RCOR2Q8IZ40 523 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 JADE3Q92613 823 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 C1orf50Q9BV19 199 aa12.94□□□□□ -0.34
HLCS-207ENST00000612277 THUMPD3Q9BV44 507 aaKnown RBP12.94□□□□□ -0.34
HLCS-207ENST00000612277 SPAG6O75602 509 aa12.93□□□□□ -0.34
HLCS-207ENST00000612277 AP1G2O75843 785 aa12.93□□□□□ -0.34
HLCS-207ENST00000612277 PGK2P07205 417 aa12.93□□□□□ -0.34
HLCS-207ENST00000612277 WEE2P0C1S8 567 aa12.93□□□□□ -0.34
HLCS-207ENST00000612277 PRIM2P49643 509 aa12.93□□□□□ -0.34
HLCS-207ENST00000612277 TNFAIP2Q03169 654 aa12.93□□□□□ -0.34
HLCS-207ENST00000612277 MTFR1Q15390 333 aa12.93□□□□□ -0.34
HLCS-207ENST00000612277 CCDC157Q569K6 752 aa12.93□□□□□ -0.34
HLCS-207ENST00000612277 FRMD6Q96NE9 622 aa12.93□□□□□ -0.34
HLCS-207ENST00000612277 FAM192AQ9GZU8 254 aa12.93□□□□□ -0.34
HLCS-207ENST00000612277 COMMD9Q9P000 198 aa12.93□□□□□ -0.34
HLCS-207ENST00000612277 HMGXB3Q12766 1538 aa12.93□□□□□ -0.34
HLCS-207ENST00000612277 TTLL1O95922 423 aa12.93□□□□□ -0.34
HLCS-207ENST00000612277 NR3C1P04150 777 aa12.93□□□□□ -0.34
HLCS-207ENST00000612277 ATP6V1B2P21281 511 aa12.93□□□□□ -0.34
HLCS-207ENST00000612277 CASP4P49662 377 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms