RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 HIF1AQ16665 826 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 METTL7BQ6UX53 244 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 PCGF5Q86SE9 256 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 MAP4K3Q8IVH8 894 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 SPIRE2Q8WWL2 714 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 HPDLQ96IR7 371 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 EFCC1Q9HA90 598 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.88□□□□□ -0.191e-6■■■■□ 21.9
TCF3-220ENST00000611869 PLIN4Q96Q06 1357 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 PHF20L1A8MW92 1017 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 CHN1P15882 459 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 CYP2B6P20813 491 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 PRKCIP41743 596 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 AMPD2Q01433 879 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 NME3Q13232 169 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 UGCGQ16739 394 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 GLRA4Q5JXX5 417 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 RWDD4Q6NW29 188 aaKnown RBP13.88□□□□□ -0.19
TCF3-220ENST00000611869 RAPH1Q70E73 1250 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 ADRB2P07550 413 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 ERVK-9P63128 1117 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 C9orf131Q5VYM1 1079 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 CGRRF1Q99675 332 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 KLHL8Q9P2G9 620 aaPredicted RBP13.88□□□□□ -0.19
TCF3-220ENST00000611869 DUOX1Q9NRD9 1551 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 TLR2O60603 784 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 VTNP04004 478 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 CTSHP09668 335 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 GARSP41250 739 aaKnown RBP13.87□□□□□ -0.19
TCF3-220ENST00000611869 MAGEA9P43362 315 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 TAF1CQ15572 869 aaPredicted RBP13.87□□□□□ -0.19
TCF3-220ENST00000611869 DNERQ8NFT8 737 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 MDM1Q8TC05 714 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 PSD3Q9NYI0 1048 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 WDR35Q9P2L0 1181 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 NEU2Q9Y3R4 380 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 ARHGAP42A6NI28 874 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 ZC3H11AO75152 810 aaKnown RBP eCLIP13.87□□□□□ -0.197e-6■■□□□ 13.7
TCF3-220ENST00000611869 KRT37O76014 449 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 ALDH5A1P51649 535 aaPredicted RBP13.87□□□□□ -0.19
TCF3-220ENST00000611869 LAMC2Q13753 1193 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 TTC39CQ8N584 583 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 DEPDC1BQ8WUY9 529 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 EPN3Q9H201 632 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 CRCPO75575 148 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 CYP2C9P11712 490 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 MRPS9P82933 396 aaKnown RBP13.87□□□□□ -0.19
TCF3-220ENST00000611869 PRPSAP1Q14558 356 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 SNCBQ16143 134 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 KCNT1Q5JUK3 1230 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 IRF2BP2Q7Z5L9 587 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 ATP11CQ8NB49 1132 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 NT5C1AQ9BXI3 368 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 METTL5Q9NRN9 209 aaKnown RBP13.87□□□□□ -0.19
TCF3-220ENST00000611869 CYP39A1Q9NYL5 469 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 GOLGA8RI6L899 631 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 TNPO2O14787 897 aaKnown RBP13.87□□□□□ -0.19
TCF3-220ENST00000611869 TRIM66O15016 1216 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 IL18RAPO95256 599 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 C6orf222P0C671 652 aaPredicted RBP13.87□□□□□ -0.19
TCF3-220ENST00000611869 MYBL2P10244 700 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 SESN3P58005 492 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 LAMTOR4Q0VGL1 99 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 HEATR6Q6AI08 1181 aaKnown RBP13.87□□□□□ -0.19
TCF3-220ENST00000611869 NXNQ6DKJ4 435 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 TRMT10CQ7L0Y3 403 aaKnown RBP13.87□□□□□ -0.19
TCF3-220ENST00000611869 RAB3IPQ96QF0 476 aaPredicted RBP13.87□□□□□ -0.19
TCF3-220ENST00000611869 TGS1Q96RS0 853 aaKnown RBP13.87□□□□□ -0.19
TCF3-220ENST00000611869 PRMT1Q99873 361 aaKnown RBP13.87□□□□□ -0.19
TCF3-220ENST00000611869 BCAS3Q9H6U6 928 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 CISHQ9NSE2 258 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 GGT7Q9UJ14 662 aa13.87□□□□□ -0.19
TCF3-220ENST00000611869 AGTP01019 485 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 MMP14P50281 582 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 OAZ1P54368 228 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 ARL13BQ3SXY8 428 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 TMEM161BQ8NDZ6 487 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 LNX1Q8TBB1 728 aaPredicted RBP13.86□□□□□ -0.19
TCF3-220ENST00000611869 ZNF473Q8WTR7 871 aaKnown RBP13.86□□□□□ -0.19
TCF3-220ENST00000611869 ACTR5Q9H9F9 607 aaPredicted RBP13.86□□□□□ -0.19
TCF3-220ENST00000611869 A0A0G2JND7 137 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 RBP3P10745 1247 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 VGLL4Q14135 290 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 MPZL3Q6UWV2 235 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 BZW1Q7L1Q6 419 aaKnown RBP13.86□□□□□ -0.19
TCF3-220ENST00000611869 SRLQ86TD4 932 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 SCN4BQ8IWT1 228 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 RNF139Q8WU17 664 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 KRT35Q92764 455 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 PPP1R12CQ9BZL4 782 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 STAP1Q9ULZ2 295 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 RIPK3Q9Y572 518 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 A0A087WZ62 844 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 COPEO14579 308 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 CXCL8P10145 99 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 PYGMP11217 842 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 RAP1GAPP47736 663 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 GTF2BQ00403 316 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 TMEM132BQ14DG7 1078 aa13.86□□□□□ -0.19
TCF3-220ENST00000611869 AMHR2Q16671 573 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms