RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 O00370 1275 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 TLR3O15455 904 aaKnown RBP18.31■□□□□ 0.52
NEK3-206ENST00000611833 ATP2C2O75185 946 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 VIMP08670 466 aaKnown RBP18.31■□□□□ 0.52
NEK3-206ENST00000611833 CLTAP09496 248 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 HARSP12081 509 aaKnown RBP18.31■□□□□ 0.52
NEK3-206ENST00000611833 TBXAS1P24557 533 aaPredicted RBP18.31■□□□□ 0.52
NEK3-206ENST00000611833 IVDP26440 423 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 PRKG1Q13976 671 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 ANKRD20A8PQ5CZ79 823 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 SCARA3Q6AZY7 606 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 KCNV1Q6PIU1 500 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 ZNF365Q70YC5 407 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 EXOC3L1Q86VI1 746 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 LRRC34Q8IZ02 419 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 ANKRD35Q8N283 1001 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 VCPIP1Q96JH7 1222 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 SERPINB12Q96P63 405 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 FAM118BQ9BPY3 351 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 GGA3Q9NZ52 723 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 WDR90Q96KV7 1748 aa18.3■□□□□ 0.52
NEK3-206ENST00000611833 IGKV6D-21A0A0A0MT36 114 aa18.3■□□□□ 0.52
NEK3-206ENST00000611833 A0A0B4J269 797 aa18.3■□□□□ 0.52
NEK3-206ENST00000611833 ASAP2O43150 1006 aa18.3■□□□□ 0.52
NEK3-206ENST00000611833 TTC4O95801 387 aa18.3■□□□□ 0.52
NEK3-206ENST00000611833 ATP5DP30049 168 aa18.3■□□□□ 0.52
NEK3-206ENST00000611833 TAS2R40P59535 323 aa18.3■□□□□ 0.52
NEK3-206ENST00000611833 NOP14P78316 857 aaKnown RBP18.3■□□□□ 0.52
NEK3-206ENST00000611833 CNGA2Q16280 664 aa18.3■□□□□ 0.52
NEK3-206ENST00000611833 KYNUQ16719 465 aa18.3■□□□□ 0.52
NEK3-206ENST00000611833 SEZ6Q53EL9 994 aa18.3■□□□□ 0.52
NEK3-206ENST00000611833 OR5B17Q8NGF7 314 aa18.3■□□□□ 0.52
NEK3-206ENST00000611833 DYDC1Q8WWB3 177 aa18.3■□□□□ 0.52
NEK3-206ENST00000611833 P3H4Q92791 437 aa18.3■□□□□ 0.52
NEK3-206ENST00000611833 ARHGEF2Q92974 986 aaKnown RBP18.3■□□□□ 0.52
NEK3-206ENST00000611833 PCYT2Q99447 389 aa18.3■□□□□ 0.52
NEK3-206ENST00000611833 CGRRF1Q99675 332 aa18.3■□□□□ 0.52
NEK3-206ENST00000611833 NIFKQ9BYG3 293 aaKnown RBP18.3■□□□□ 0.52
NEK3-206ENST00000611833 OSBPL8Q9BZF1 889 aa18.3■□□□□ 0.52
NEK3-206ENST00000611833 SAMD15Q9P1V8 674 aa18.3■□□□□ 0.52
NEK3-206ENST00000611833 ADGRA2Q96PE1 1338 aa18.3■□□□□ 0.52
NEK3-206ENST00000611833 CNTNAP2Q9UHC6 1331 aa18.3■□□□□ 0.52
NEK3-206ENST00000611833 DNM1LO00429 736 aa18.29■□□□□ 0.52
NEK3-206ENST00000611833 CD58P19256 250 aa18.29■□□□□ 0.52
NEK3-206ENST00000611833 UBA1P22314 1058 aaKnown RBP18.29■□□□□ 0.52
NEK3-206ENST00000611833 ALDH5A1P51649 535 aaPredicted RBP18.29■□□□□ 0.52
NEK3-206ENST00000611833 SF3A3Q12874 501 aaKnown RBP eCLIP18.29■□□□□ 0.522e-6■■□□□ 13.9
NEK3-206ENST00000611833 KLF1Q13351 362 aaPredicted RBP18.29■□□□□ 0.52
NEK3-206ENST00000611833 CCNG2Q16589 344 aa18.29■□□□□ 0.52
NEK3-206ENST00000611833 ZFYVE27Q5T4F4 411 aa18.29■□□□□ 0.52
NEK3-206ENST00000611833 PHF13Q86YI8 300 aaPredicted RBP18.29■□□□□ 0.52
NEK3-206ENST00000611833 KATNAL2Q8IYT4 538 aa18.29■□□□□ 0.52
NEK3-206ENST00000611833 NUB1Q9Y5A7 615 aa18.29■□□□□ 0.52
NEK3-206ENST00000611833 GSTTP1A0A1W2PQM5 241 aa18.29■□□□□ 0.52
NEK3-206ENST00000611833 CETN2P41208 172 aa18.29■□□□□ 0.52
NEK3-206ENST00000611833 NOL9Q5SY16 702 aaKnown RBP18.29■□□□□ 0.52
NEK3-206ENST00000611833 PLEKHA7Q6IQ23 1121 aa18.29■□□□□ 0.52
NEK3-206ENST00000611833 GSTA5Q7RTV2 222 aa18.29■□□□□ 0.52
NEK3-206ENST00000611833 CCDC89Q8N998 374 aa18.29■□□□□ 0.52
NEK3-206ENST00000611833 CHST13Q8NET6 341 aa18.29■□□□□ 0.52
NEK3-206ENST00000611833 JPH2Q9BR39 696 aaPredicted RBP18.29■□□□□ 0.52
NEK3-206ENST00000611833 IMPG2Q9BZV3 1241 aa18.29■□□□□ 0.52
NEK3-206ENST00000611833 MAF1Q9H063 256 aa18.29■□□□□ 0.52
NEK3-206ENST00000611833 CCDC134Q9H6E4 229 aa18.29■□□□□ 0.52
NEK3-206ENST00000611833 PARVAQ9NVD7 372 aa18.29■□□□□ 0.52
NEK3-206ENST00000611833 C1QBPQ07021 282 aaKnown RBP18.28■□□□□ 0.52
NEK3-206ENST00000611833 NCOA4Q13772 614 aa18.28■□□□□ 0.52
NEK3-206ENST00000611833 CAPSQ13938 189 aa18.28■□□□□ 0.52
NEK3-206ENST00000611833 SPRED3Q2MJR0 410 aa18.28■□□□□ 0.52
NEK3-206ENST00000611833 PPP1R2P3Q6NXS1 205 aa18.28■□□□□ 0.52
NEK3-206ENST00000611833 BBOF1Q8ND07 529 aa18.28■□□□□ 0.52
NEK3-206ENST00000611833 EXD1Q8NHP7 514 aa18.28■□□□□ 0.52
NEK3-206ENST00000611833 FEZF2Q8TBJ5 459 aa18.28■□□□□ 0.52
NEK3-206ENST00000611833 MGARPQ8TDB4 240 aa18.28■□□□□ 0.52
NEK3-206ENST00000611833 CCT6BQ92526 530 aa18.28■□□□□ 0.52
NEK3-206ENST00000611833 NSRP1Q9H0G5 558 aaKnown RBP18.28■□□□□ 0.52
NEK3-206ENST00000611833 KDM4CQ9H3R0 1056 aa18.28■□□□□ 0.52
NEK3-206ENST00000611833 TTLL13PA6NNM8 815 aa18.28■□□□□ 0.52
NEK3-206ENST00000611833 FARP2O94887 1054 aaPredicted RBP18.28■□□□□ 0.52
NEK3-206ENST00000611833 GJB6O95452 261 aa18.28■□□□□ 0.52
NEK3-206ENST00000611833 MNAT1P51948 309 aa18.28■□□□□ 0.52
NEK3-206ENST00000611833 TARBP2Q15633 366 aaKnown RBP18.28■□□□□ 0.52
NEK3-206ENST00000611833 LACTB2Q53H82 288 aaPredicted RBP18.28■□□□□ 0.52
NEK3-206ENST00000611833 SH3D19Q5HYK7 790 aa18.28■□□□□ 0.52
NEK3-206ENST00000611833 TREML2Q5T2D2 321 aa18.28■□□□□ 0.52
NEK3-206ENST00000611833 TAX1BP1Q86VP1 789 aa18.28■□□□□ 0.52
NEK3-206ENST00000611833 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.28■□□□□ 0.52
NEK3-206ENST00000611833 ELAC2Q9BQ52 826 aaKnown RBP18.28■□□□□ 0.52
NEK3-206ENST00000611833 CCT8L1PA6NM43 557 aa18.27■□□□□ 0.52
NEK3-206ENST00000611833 SCTRP47872 440 aa18.27■□□□□ 0.52
NEK3-206ENST00000611833 IZUMO3Q5VZ72 239 aa18.27■□□□□ 0.52
NEK3-206ENST00000611833 PIGWQ7Z7B1 504 aa18.27■□□□□ 0.52
NEK3-206ENST00000611833 PWWP2AQ96N64 755 aa18.27■□□□□ 0.52
NEK3-206ENST00000611833 TMEM134Q9H6X4 195 aa18.27■□□□□ 0.52
NEK3-206ENST00000611833 KCNK9Q9NPC2 374 aa18.27■□□□□ 0.52
NEK3-206ENST00000611833 IP6K2Q9UHH9 426 aa18.27■□□□□ 0.52
NEK3-206ENST00000611833 CNTN6Q9UQ52 1028 aa18.27■□□□□ 0.52
NEK3-206ENST00000611833 HIRAP54198 1017 aaPredicted RBP18.27■□□□□ 0.51
NEK3-206ENST00000611833 ITIH4Q14624 930 aa18.27■□□□□ 0.51
NEK3-206ENST00000611833 LRRC14Q15048 493 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms