RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 SFMBT2Q5VUG0 894 aa16.97■□□□□ 0.31
RTN1-209ENST00000611068 CBWD2Q8IUF1 395 aa16.97■□□□□ 0.31
RTN1-209ENST00000611068 GCNT4Q9P109 453 aa16.97■□□□□ 0.31
RTN1-209ENST00000611068 PON1P27169 355 aa16.97■□□□□ 0.31
RTN1-209ENST00000611068 GSTT1P30711 240 aa16.97■□□□□ 0.31
RTN1-209ENST00000611068 EIF4A3P38919 411 aaKnown RBP16.97■□□□□ 0.31
RTN1-209ENST00000611068 KRT71Q3SY84 523 aa16.97■□□□□ 0.31
RTN1-209ENST00000611068 SEZ6Q53EL9 994 aa16.97■□□□□ 0.31
RTN1-209ENST00000611068 TDRD12Q587J7 1177 aaKnown RBP16.97■□□□□ 0.31
RTN1-209ENST00000611068 MIPOL1Q8TD10 442 aa16.97■□□□□ 0.31
RTN1-209ENST00000611068 SLC7A3Q8WY07 619 aa16.97■□□□□ 0.31
RTN1-209ENST00000611068 ANKRD27Q96NW4 1050 aa16.97■□□□□ 0.31
RTN1-209ENST00000611068 IQCGQ9H095 443 aaKnown RBP16.97■□□□□ 0.31
RTN1-209ENST00000611068 PDLIM7Q9NR12 457 aa16.97■□□□□ 0.31
RTN1-209ENST00000611068 SAMD15Q9P1V8 674 aa16.97■□□□□ 0.31
RTN1-209ENST00000611068 FBXL5Q9UKA1 691 aa16.97■□□□□ 0.31
RTN1-209ENST00000611068 SPATA31D3P0C874 917 aa16.96■□□□□ 0.31
RTN1-209ENST00000611068 ZNF286BP0CG31 522 aa16.96■□□□□ 0.31
RTN1-209ENST00000611068 SRGAP2CP0DJJ0 459 aa16.96■□□□□ 0.31
RTN1-209ENST00000611068 HARSP12081 509 aaKnown RBP16.96■□□□□ 0.31
RTN1-209ENST00000611068 GCLMP48507 274 aa16.96■□□□□ 0.31
RTN1-209ENST00000611068 NCKAP1LP55160 1127 aa16.96■□□□□ 0.31
RTN1-209ENST00000611068 COPS2P61201 443 aa16.96■□□□□ 0.31
RTN1-209ENST00000611068 ZNF792Q3KQV3 632 aa16.96■□□□□ 0.31
RTN1-209ENST00000611068 GALNTL6Q49A17 601 aa16.96■□□□□ 0.31
RTN1-209ENST00000611068 CFAP221Q4G0U5 840 aa16.96■□□□□ 0.31
RTN1-209ENST00000611068 CCDC62Q6P9F0 684 aa16.96■□□□□ 0.31
RTN1-209ENST00000611068 SPATA31D4Q6ZUB0 917 aa16.96■□□□□ 0.31
RTN1-209ENST00000611068 CCNJLQ8IV13 435 aa16.96■□□□□ 0.31
RTN1-209ENST00000611068 LENG1Q96BZ8 264 aaPredicted RBP16.96■□□□□ 0.31
RTN1-209ENST00000611068 ZBTB45Q96K62 511 aaPredicted RBP16.96■□□□□ 0.31
RTN1-209ENST00000611068 MPHOSPH6Q99547 160 aaKnown RBP16.96■□□□□ 0.31
RTN1-209ENST00000611068 DMAP1Q9NPF5 467 aaPredicted RBP16.96■□□□□ 0.31
RTN1-209ENST00000611068 DMAC2Q9NW81 257 aa16.96■□□□□ 0.31
RTN1-209ENST00000611068 BZW2Q9Y6E2 419 aaKnown RBP16.96■□□□□ 0.31
RTN1-209ENST00000611068 MYH10P35580 1976 aa16.96■□□□□ 0.31
RTN1-209ENST00000611068 hCG_2014768A0A024R1R8 64 aa16.96■□□□□ 0.3
RTN1-209ENST00000611068 HGSO14964 777 aaPredicted RBP16.96■□□□□ 0.3
RTN1-209ENST00000611068 HNRNPDLO14979 420 aaKnown RBP16.96■□□□□ 0.3
RTN1-209ENST00000611068 CSDE1O75534 798 aaKnown RBP16.96■□□□□ 0.3
RTN1-209ENST00000611068 TGFB3P10600 412 aa16.96■□□□□ 0.3
RTN1-209ENST00000611068 PAX3P23760 479 aa16.96■□□□□ 0.3
RTN1-209ENST00000611068 PEX5P50542 639 aa16.96■□□□□ 0.3
RTN1-209ENST00000611068 FKBP1BP68106 108 aa16.96■□□□□ 0.3
RTN1-209ENST00000611068 TAS1R3Q7RTX0 852 aa16.96■□□□□ 0.3
RTN1-209ENST00000611068 LCA5Q86VQ0 697 aa16.96■□□□□ 0.3
RTN1-209ENST00000611068 KLHL7Q8IXQ5 586 aa16.96■□□□□ 0.3
RTN1-209ENST00000611068 RETREG2Q8NC44 543 aa16.96■□□□□ 0.3
RTN1-209ENST00000611068 NPLOC4Q8TAT6 608 aa16.96■□□□□ 0.3
RTN1-209ENST00000611068 PLEKHO2Q8TD55 490 aa16.96■□□□□ 0.3
RTN1-209ENST00000611068 DYDC1Q8WWB3 177 aa16.96■□□□□ 0.3
RTN1-209ENST00000611068 ATXN2LQ8WWM7 1075 aaKnown RBP16.96■□□□□ 0.3
RTN1-209ENST00000611068 IFT74Q96LB3 600 aa16.96■□□□□ 0.3
RTN1-209ENST00000611068 CCDC42Q96M95 316 aa16.96■□□□□ 0.3
RTN1-209ENST00000611068 IFIH1Q9BYX4 1025 aaKnown RBP16.96■□□□□ 0.3
RTN1-209ENST00000611068 RNPEPQ9H4A4 650 aa16.96■□□□□ 0.3
RTN1-209ENST00000611068 TLR2O60603 784 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 DKC1O60832 514 aaKnown RBP eCLIP16.95■□□□□ 0.3
RTN1-209ENST00000611068 ZNF24P17028 368 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 GLRA2P23416 452 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 SLC39A4Q6P5W5 647 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 FOXR2Q6PJQ5 311 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 APBB1IPQ7Z5R6 666 aaPredicted RBP16.95■□□□□ 0.3
RTN1-209ENST00000611068 METTL13Q8N6R0 699 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 POMGNT1Q8WZA1 660 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 TRAPPC9Q96Q05 1148 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 PARK7Q99497 189 aaKnown RBP16.95■□□□□ 0.3
RTN1-209ENST00000611068 TMEM206Q9H813 350 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 TOPORSQ9NS56 1045 aaPredicted RBP16.95■□□□□ 0.3
RTN1-209ENST00000611068 IGKV6D-21A0A0A0MT36 114 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 TTLL13PA6NNM8 815 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 SART1O43290 800 aaKnown RBP16.95■□□□□ 0.3
RTN1-209ENST00000611068 SNAI1O95863 264 aaPredicted RBP16.95■□□□□ 0.3
RTN1-209ENST00000611068 ADRB2P07550 413 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 FAM200BP0CF97 657 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 MAPTP10636 758 aaKnown RBP16.95■□□□□ 0.3
RTN1-209ENST00000611068 USP46P62068 366 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 GFPT1Q06210 699 aaPredicted RBP16.95■□□□□ 0.3
RTN1-209ENST00000611068 BNIP1Q12981 228 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 TTLL4Q14679 1199 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 TAF1CQ15572 869 aaPredicted RBP16.95■□□□□ 0.3
RTN1-209ENST00000611068 LMBRD2Q68DH5 695 aaPredicted RBP16.95■□□□□ 0.3
RTN1-209ENST00000611068 PDXDC1Q6P996 788 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 RASAL3Q86YV0 1011 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 MCPH1Q8NEM0 835 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 UTP4Q969X6 686 aaKnown RBP16.95■□□□□ 0.3
RTN1-209ENST00000611068 PPP1R12CQ9BZL4 782 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 RAB17Q9H0T7 212 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 NRBP2Q9NSY0 501 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.95■□□□□ 0.3
RTN1-209ENST00000611068 PCDHA13Q9Y5I0 950 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 HTTP42858 3142 aa16.95■□□□□ 0.3
RTN1-209ENST00000611068 GOLGA6L10A0A0M3HER8 536 aa16.94■□□□□ 0.3
RTN1-209ENST00000611068 SLC16A3O15427 465 aaKnown RBP16.94■□□□□ 0.3
RTN1-209ENST00000611068 BUB1O43683 1085 aa16.94■□□□□ 0.3
RTN1-209ENST00000611068 ZBTB48P10074 688 aaPredicted RBP16.94■□□□□ 0.3
RTN1-209ENST00000611068 SETDB1Q15047 1291 aa16.94■□□□□ 0.3
RTN1-209ENST00000611068 SPA17Q15506 151 aa16.94■□□□□ 0.3
RTN1-209ENST00000611068 FAM160B1Q5W0V3 765 aa16.94■□□□□ 0.3
RTN1-209ENST00000611068 TAPT1Q6NXT6 567 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms