RNA–Protein interactions for RNA: ENST00000610356.4

RDH13-223, Transcript of retinol dehydrogenase 13, human

TSL 1 (best) BASIC

Gene RDH13, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDH13-223	ENST00000610356	AARS	P49588	968 aa	Known RBP eCLIP	18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	FCGRT	P55899	365 aa		18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	NOMO3	P69849	1222 aa		18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	PCBP1	Q15365	356 aa	Known RBP eCLIP	18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	FSCN1	Q16658	493 aa	Known RBP	18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	ZNF667	Q5HYK9	610 aa		18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	SCARA5	Q6ZMJ2	495 aa		18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	RUFY4	Q6ZNE9	571 aa		18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	CATSPER4	Q7RTX7	472 aa		18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	UBL4B	Q8N7F7	174 aa		18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	FAM71B	Q8TC56	605 aa		18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	PPP1R13L	Q8WUF5	828 aa		18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	SIX4	Q9UIU6	781 aa		18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	TMEM59L	Q9UK28	342 aa		18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	MGAM	O43451	1857 aa		18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	ITGB3	P05106	788 aa		18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	GRM5	P41594	1212 aa		18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	ADAM17	P78536	824 aa		18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	TMEM132D	Q14C87	1099 aa		18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	PASD1	Q8IV76	773 aa		18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	FAXDC2	Q96IV6	333 aa		18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	HHIPL1	Q96JK4	782 aa		18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	OSMR	Q99650	979 aa		18.19	■□□□□ 0.5
RDH13-223	ENST00000610356	ERICH4	A6NGS2	130 aa		18.18	■□□□□ 0.5
RDH13-223	ENST00000610356	WEE2	P0C1S8	567 aa		18.18	■□□□□ 0.5
RDH13-223	ENST00000610356	ATIC	P31939	592 aa		18.18	■□□□□ 0.5
RDH13-223	ENST00000610356	LIN9	Q5TKA1	542 aa		18.18	■□□□□ 0.5
RDH13-223	ENST00000610356	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	18.18	■□□□□ 0.5
RDH13-223	ENST00000610356	MON1B	Q7L1V2	547 aa		18.18	■□□□□ 0.5
RDH13-223	ENST00000610356	NT5DC4	Q86YG4	428 aa		18.18	■□□□□ 0.5
RDH13-223	ENST00000610356	ZNF606	Q8WXB4	792 aa		18.18	■□□□□ 0.5
RDH13-223	ENST00000610356	ZIC5	Q96T25	663 aa		18.18	■□□□□ 0.5
RDH13-223	ENST00000610356	KRT12	Q99456	494 aa		18.18	■□□□□ 0.5
RDH13-223	ENST00000610356	STIM2	Q9P246	746 aa		18.18	■□□□□ 0.5
RDH13-223	ENST00000610356	NXF1	Q9UBU9	619 aa	Known RBP	18.18	■□□□□ 0.5
RDH13-223	ENST00000610356	TTC7A	Q9ULT0	858 aa	Predicted RBP	18.18	■□□□□ 0.5
RDH13-223	ENST00000610356	C2CD2	Q9Y426	696 aa		18.18	■□□□□ 0.5
RDH13-223	ENST00000610356	C17orf102	A2RUQ5	167 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	ZMYND10	O75800	440 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	NPTXR	O95502	500 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	CFH	P08603	1231 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	DARS	P14868	501 aa	Known RBP	18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	COMT	P21964	271 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	RRM1	P23921	792 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	HIC1	Q14526	733 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	NOTUM	Q6P988	496 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	SLC27A1	Q6PCB7	646 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	CD302	Q8IX05	232 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	HDAC7	Q8WUI4	952 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	DNAJB3	Q8WWF6	145 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	VCPIP1	Q96JH7	1222 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	ZSWIM1	Q9BR11	485 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	WNT8A	Q9H1J5	351 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	DMGDH	Q9UI17	866 aa	Known RBP	18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	POLI	Q9UNA4	740 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	CCDC188	H7C350	402 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	SPOP	O43791	374 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	DUSP11	O75319	330 aa	Known RBP	18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	GNAT1	P11488	350 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	PURA	Q00577	322 aa	Known RBP	18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	CLUL1	Q15846	466 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	DCAF12L1	Q5VU92	463 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	MFSD14C	Q5VZR4	134 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	CCNI2	Q6ZMN8	369 aa	Predicted RBP	18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	PHF13	Q86YI8	300 aa	Predicted RBP	18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	SMC1B	Q8NDV3	1235 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	BTBD6	Q96KE9	485 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	C11orf70	Q9BRQ4	267 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	BCO2	Q9BYV7	579 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	CDHR5	Q9HBB8	845 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	ADAM22	Q9P0K1	906 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	ITGA11	Q9UKX5	1188 aa		18.17	■□□□□ 0.5
RDH13-223	ENST00000610356	TMEM88B	A6NKF7	163 aa		18.16	■□□□□ 0.5
RDH13-223	ENST00000610356	KRIT1	O00522	736 aa		18.16	■□□□□ 0.5
RDH13-223	ENST00000610356	TREH	O43280	583 aa		18.16	■□□□□ 0.5
RDH13-223	ENST00000610356	LSM8	O95777	96 aa	Known RBP	18.16	■□□□□ 0.5
RDH13-223	ENST00000610356	ALDH1A1	P00352	501 aa		18.16	■□□□□ 0.5
RDH13-223	ENST00000610356	POLR2B	P30876	1174 aa	Known RBP	18.16	■□□□□ 0.5
RDH13-223	ENST00000610356	HOXA11	P31270	313 aa	Predicted RBP	18.16	■□□□□ 0.5
RDH13-223	ENST00000610356	PSMC4	P43686	418 aa		18.16	■□□□□ 0.5
RDH13-223	ENST00000610356	SLC7A5	Q01650	507 aa		18.16	■□□□□ 0.5
RDH13-223	ENST00000610356	WDR72	Q3MJ13	1102 aa		18.16	■□□□□ 0.5
RDH13-223	ENST00000610356	ZNF394	Q53GI3	561 aa		18.16	■□□□□ 0.5
RDH13-223	ENST00000610356	HSP90B2P	Q58FF3	399 aa		18.16	■□□□□ 0.5
RDH13-223	ENST00000610356	C7orf31	Q8N865	590 aa		18.16	■□□□□ 0.5
RDH13-223	ENST00000610356	TRPV1	Q8NER1	839 aa		18.16	■□□□□ 0.5
RDH13-223	ENST00000610356	RNPC3	Q96LT9	517 aa	Known RBP	18.16	■□□□□ 0.5
RDH13-223	ENST00000610356	NAP1L3	Q99457	506 aa	Predicted RBP	18.16	■□□□□ 0.5
RDH13-223	ENST00000610356	VRTN	Q9H8Y1	702 aa		18.16	■□□□□ 0.5
RDH13-223	ENST00000610356	ANAPC7	Q9UJX3	599 aa		18.16	■□□□□ 0.5
RDH13-223	ENST00000610356	KPNA6	O60684	536 aa		18.15	■□□□□ 0.5
RDH13-223	ENST00000610356	FGG	P02679	453 aa		18.15	■□□□□ 0.5
RDH13-223	ENST00000610356	C6orf222	P0C671	652 aa	Predicted RBP	18.15	■□□□□ 0.5
RDH13-223	ENST00000610356	CYBA	P13498	195 aa		18.15	■□□□□ 0.5
RDH13-223	ENST00000610356	P4HA1	P13674	534 aa		18.15	■□□□□ 0.5
RDH13-223	ENST00000610356	EIF4B	P23588	611 aa	Known RBP	18.15	■□□□□ 0.5
RDH13-223	ENST00000610356	BRD2	P25440	801 aa	Known RBP	18.15	■□□□□ 0.5
RDH13-223	ENST00000610356	SSTR3	P32745	418 aa	Predicted RBP	18.15	■□□□□ 0.5
RDH13-223	ENST00000610356	MRPS25	P82663	173 aa	Known RBP	18.15	■□□□□ 0.5
RDH13-223	ENST00000610356	C1QBP	Q07021	282 aa	Known RBP	18.15	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms