RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 PLA2G2AP14555 144 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 ENGP17813 658 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 LIG1P18858 919 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 CHMLP26374 656 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 FCHO2Q0JRZ9 810 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 HDAC1Q13547 482 aaPredicted RBP10.24□□□□□ -0.77
CTCFL-220ENST00000608858 PFKFB3Q16875 520 aaPredicted RBP10.24□□□□□ -0.77
CTCFL-220ENST00000608858 TMEM132AQ24JP5 1023 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 TRIM68Q6AZZ1 485 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 C1orf228Q6PIY5 440 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 APOA5Q6Q788 366 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 RNF19BQ6ZMZ0 732 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 HAUS6Q7Z4H7 955 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 PIP4P1Q86T03 277 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 TMEFF1Q8IYR6 380 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 C3orf58Q8NDZ4 430 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 RDM1Q8NG50 284 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 RPLP0P6Q8NHW5 317 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 RLN3Q8WXF3 142 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 CHFRQ96EP1 664 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 CCDC51Q96ER9 411 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 MSANTD3Q96H12 275 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 MTRQ99707 1265 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 BOLA1Q9Y3E2 137 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 ADAMTS9Q9P2N4 1935 aa10.24□□□□□ -0.77
CTCFL-220ENST00000608858 GOLGA8AA7E2F4 631 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 GOLGA8BA8MQT2 603 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 RECQL4O94761 1208 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 RFC5P40937 340 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 USP11P51784 963 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 SEMA3BQ13214 749 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 CAPSQ13938 189 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 CTTNQ14247 550 aaKnown RBP10.23□□□□□ -0.77
CTCFL-220ENST00000608858 ITPRIPL2Q3MIP1 535 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 ARHGAP29Q52LW3 1261 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 USP39Q53GS9 565 aaKnown RBP10.23□□□□□ -0.77
CTCFL-220ENST00000608858 TMEM196Q5HYL7 178 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 B3GNT9Q6UX72 402 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 RAB44Q7Z6P3 723 aaPredicted RBP10.23□□□□□ -0.77
CTCFL-220ENST00000608858 TTC16Q8NEE8 873 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 TBCKQ8TEA7 893 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 RUFY2Q8WXA3 655 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 E2F7Q96AV8 911 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 PGLYRP2Q96PD5 576 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 NUSAP1Q9BXS6 441 aaKnown RBP10.23□□□□□ -0.77
CTCFL-220ENST00000608858 GPR88Q9GZN0 384 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 ATXN3LQ9H3M9 355 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 EBF3Q9H4W6 596 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 FBXL5Q9UKA1 691 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 SLC27A5Q9Y2P5 690 aa10.23□□□□□ -0.77
CTCFL-220ENST00000608858 ATXN2Q99700 1313 aaKnown RBP10.23□□□□□ -0.77
CTCFL-220ENST00000608858 H0Y626 953 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 hCG_1984214I3L0E3 225 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 TRAPPC3O43617 180 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 TRIM16O95361 564 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 APBB3O95704 486 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 CFIP05156 583 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 GNA11P29992 359 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 YWHABP31946 246 aaKnown RBP10.22□□□□□ -0.77
CTCFL-220ENST00000608858 NUCB1Q02818 461 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 CYP4A11Q02928 519 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 TFDP1Q14186 410 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 DMC1Q14565 340 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 MXD4Q14582 209 aaPredicted RBP10.22□□□□□ -0.77
CTCFL-220ENST00000608858 CTXN3Q4LDR2 81 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 GPR158Q5T848 1215 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 PMS2CLQ68D20 193 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 SLC8B1Q6J4K2 584 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 CCNI2Q6ZMN8 369 aaPredicted RBP10.22□□□□□ -0.77
CTCFL-220ENST00000608858 TPH2Q8IWU9 490 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 EXOC8Q8IYI6 725 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 ZNF713Q8N859 430 aaPredicted RBP10.22□□□□□ -0.77
CTCFL-220ENST00000608858 SPRYD3Q8NCJ5 442 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 DYDC2Q96IM9 177 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 MTA3Q9BTC8 594 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 LRRC3Q9BY71 257 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 XPNPEP1Q9NQW7 623 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 RAI2Q9Y5P3 530 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 PLXNB3Q9ULL4 1909 aa10.22□□□□□ -0.77
CTCFL-220ENST00000608858 KLF18A0A0U1RQI7 1052 aa10.21□□□□□ -0.77
CTCFL-220ENST00000608858 SLC27A2O14975 620 aa10.21□□□□□ -0.77
CTCFL-220ENST00000608858 SH3BP5O60239 455 aa10.21□□□□□ -0.77
CTCFL-220ENST00000608858 SOAT2O75908 522 aa10.21□□□□□ -0.77
CTCFL-220ENST00000608858 PRAMEF12O95522 483 aa10.21□□□□□ -0.77
CTCFL-220ENST00000608858 P4HBP07237 508 aaKnown RBP10.21□□□□□ -0.77
CTCFL-220ENST00000608858 OR4Q2P0C623 313 aa10.21□□□□□ -0.77
CTCFL-220ENST00000608858 GSPT1P15170 499 aaKnown RBP10.21□□□□□ -0.77
CTCFL-220ENST00000608858 GLRA2P23416 452 aa10.21□□□□□ -0.77
CTCFL-220ENST00000608858 PTGER3P43115 390 aa10.21□□□□□ -0.77
CTCFL-220ENST00000608858 ATXN3P54252 364 aaPredicted RBP10.21□□□□□ -0.77
CTCFL-220ENST00000608858 CYP4F3Q08477 520 aa10.21□□□□□ -0.77
CTCFL-220ENST00000608858 LMAN2Q12907 356 aa10.21□□□□□ -0.77
CTCFL-220ENST00000608858 DUSP4Q13115 394 aa10.21□□□□□ -0.77
CTCFL-220ENST00000608858 KARSQ15046 597 aaKnown RBP10.21□□□□□ -0.77
CTCFL-220ENST00000608858 TRIP6Q15654 476 aaKnown RBP10.21□□□□□ -0.77
CTCFL-220ENST00000608858 UPP1Q16831 310 aa10.21□□□□□ -0.77
CTCFL-220ENST00000608858 Q4G0T1 1027 aa10.21□□□□□ -0.77
CTCFL-220ENST00000608858 ANO7Q6IWH7 933 aa10.21□□□□□ -0.77
CTCFL-220ENST00000608858 OTUD6AQ7L8S5 288 aa10.21□□□□□ -0.77
CTCFL-220ENST00000608858 SGMS1Q86VZ5 419 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms