RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 C18orf25Q96B23 403 aaPredicted RBP14.85□□□□□ -0.03
CTSA-218ENST00000607814 DHX58Q96C10 678 aa14.85□□□□□ -0.03
CTSA-218ENST00000607814 DNAJC19Q96DA6 116 aa14.85□□□□□ -0.03
CTSA-218ENST00000607814 CCDC94Q9BW85 323 aaPredicted RBP14.85□□□□□ -0.03
CTSA-218ENST00000607814 FGFBP2Q9BYJ0 223 aa14.85□□□□□ -0.03
CTSA-218ENST00000607814 STK17AQ9UEE5 414 aa14.85□□□□□ -0.03
CTSA-218ENST00000607814 GMEB2Q9UKD1 530 aa14.85□□□□□ -0.03
CTSA-218ENST00000607814 KCNH3Q9ULD8 1083 aa14.85□□□□□ -0.03
CTSA-218ENST00000607814 USP18Q9UMW8 372 aa14.85□□□□□ -0.03
CTSA-218ENST00000607814 PCDHA7Q9UN72 937 aa14.85□□□□□ -0.03
CTSA-218ENST00000607814 MRPS17Q9Y2R5 130 aaKnown RBP14.85□□□□□ -0.03
CTSA-218ENST00000607814 MTF2Q9Y483 593 aaPredicted RBP14.85□□□□□ -0.03
CTSA-218ENST00000607814 CNOT1A5YKK6 2376 aaKnown RBP14.85□□□□□ -0.03
CTSA-218ENST00000607814 DOCK6Q96HP0 2047 aa14.85□□□□□ -0.03
CTSA-218ENST00000607814 FAM208BQ5VWN6 2430 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 ANKRD63C9JTQ0 380 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 I3L4J1 428 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 CLDN3O15551 220 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 CUTAO60888 179 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 LRP3O75074 770 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 PPP6R2O75170 966 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 TOM1L1O75674 476 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 YEATS4O95619 227 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 CASP1P29466 404 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 ME1P48163 572 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 LIG4P49917 911 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 YARSP54577 528 aaKnown RBP14.84□□□□□ -0.03
CTSA-218ENST00000607814 NRLP54845 237 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 KCNA1Q09470 495 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 NOLC1Q14978 699 aaKnown RBP eCLIP14.84□□□□□ -0.039e-12■■□□□ 12.5
CTSA-218ENST00000607814 SLC10A6Q3KNW5 377 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 PPM1LQ5SGD2 360 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 SLC39A4Q6P5W5 647 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 PDXDC1Q6P996 788 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 PRSS55Q6UWB4 352 aaPredicted RBP14.84□□□□□ -0.03
CTSA-218ENST00000607814 ALKAL1Q6UXT8 129 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 ZNF852Q6ZMS4 543 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 MAMSTRQ6ZN01 415 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 ACAP3Q96P50 834 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 PPP1R10Q96QC0 940 aaKnown RBP14.84□□□□□ -0.03
CTSA-218ENST00000607814 IER2Q9BTL4 223 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 ATRXP46100 2492 aa14.84□□□□□ -0.03
CTSA-218ENST00000607814 DCDC2BA2VCK2 349 aa14.83□□□□□ -0.04
CTSA-218ENST00000607814 HNRNPDLO14979 420 aaKnown RBP14.83□□□□□ -0.04
CTSA-218ENST00000607814 C8AP07357 584 aa14.83□□□□□ -0.04
CTSA-218ENST00000607814 CXCL8P10145 99 aa14.83□□□□□ -0.04
CTSA-218ENST00000607814 BRCC3P46736 316 aa14.83□□□□□ -0.04
CTSA-218ENST00000607814 CASP5P51878 434 aa14.83□□□□□ -0.04
CTSA-218ENST00000607814 PPP2R5DQ14738 602 aa14.83□□□□□ -0.04
CTSA-218ENST00000607814 UVSSAQ2YD98 709 aa14.83□□□□□ -0.04
CTSA-218ENST00000607814 RTP2Q5QGT7 225 aa14.83□□□□□ -0.04
CTSA-218ENST00000607814 FAM171A1Q5VUB5 890 aa14.83□□□□□ -0.04
CTSA-218ENST00000607814 CD300LGQ6UXG3 332 aa14.83□□□□□ -0.04
CTSA-218ENST00000607814 ST13P5Q8NFI4 369 aaPredicted RBP14.83□□□□□ -0.04
CTSA-218ENST00000607814 NETO1Q8TDF5 533 aa14.83□□□□□ -0.04
CTSA-218ENST00000607814 PIK3R5Q8WYR1 880 aa14.83□□□□□ -0.04
CTSA-218ENST00000607814 FAM212AQ96EL1 285 aa14.83□□□□□ -0.04
CTSA-218ENST00000607814 TTPALQ9BTX7 342 aa14.83□□□□□ -0.04
CTSA-218ENST00000607814 KCNG1Q9UIX4 513 aa14.83□□□□□ -0.04
CTSA-218ENST00000607814 RAB23Q9ULC3 237 aa14.83□□□□□ -0.04
CTSA-218ENST00000607814 ECI2O75521 394 aa14.82□□□□□ -0.04
CTSA-218ENST00000607814 B3GAT3O94766 335 aa14.82□□□□□ -0.04
CTSA-218ENST00000607814 TARSP26639 723 aaKnown RBP14.82□□□□□ -0.04
CTSA-218ENST00000607814 GUCY2FP51841 1108 aa14.82□□□□□ -0.04
CTSA-218ENST00000607814 GTF2BQ00403 316 aa14.82□□□□□ -0.04
CTSA-218ENST00000607814 MCL1Q07820 350 aa14.82□□□□□ -0.04
CTSA-218ENST00000607814 ADCY1Q08828 1119 aa14.82□□□□□ -0.04
CTSA-218ENST00000607814 E2F4Q16254 413 aa14.82□□□□□ -0.04
CTSA-218ENST00000607814 ZPBP2Q6X784 338 aa14.82□□□□□ -0.04
CTSA-218ENST00000607814 ZNF720Q7Z2F6 126 aa14.82□□□□□ -0.04
CTSA-218ENST00000607814 APBB1IPQ7Z5R6 666 aaPredicted RBP14.82□□□□□ -0.04
CTSA-218ENST00000607814 CELF5Q8N6W0 485 aaKnown RBP14.82□□□□□ -0.04
CTSA-218ENST00000607814 C3orf58Q8NDZ4 430 aa14.82□□□□□ -0.04
CTSA-218ENST00000607814 GLIS3Q8NEA6 775 aa14.82□□□□□ -0.04
CTSA-218ENST00000607814 CLSTN3Q9BQT9 956 aa14.82□□□□□ -0.04
CTSA-218ENST00000607814 MRPL44Q9H9J2 332 aaKnown RBP14.82□□□□□ -0.04
CTSA-218ENST00000607814 GDE1Q9NZC3 331 aa14.82□□□□□ -0.04
CTSA-218ENST00000607814 TUBGCP4Q9UGJ1 667 aa14.82□□□□□ -0.04
CTSA-218ENST00000607814 MORC2Q9Y6X9 1032 aaPredicted RBP14.82□□□□□ -0.04
CTSA-218ENST00000607814 BAHCC1Q9P281 2608 aa14.81□□□□□ -0.04
CTSA-218ENST00000607814 H0YCG3 227 aa14.81□□□□□ -0.04
CTSA-218ENST00000607814 SLC30A4O14863 429 aa14.81□□□□□ -0.04
CTSA-218ENST00000607814 POLR2DO15514 142 aaKnown RBP14.81□□□□□ -0.04
CTSA-218ENST00000607814 FOXD2O60548 495 aaPredicted RBP14.81□□□□□ -0.04
CTSA-218ENST00000607814 CD72P21854 359 aa14.81□□□□□ -0.04
CTSA-218ENST00000607814 ACOT2P49753 483 aa14.81□□□□□ -0.04
CTSA-218ENST00000607814 NTHL1P78549 312 aa14.81□□□□□ -0.04
CTSA-218ENST00000607814 ELAVL2Q12926 359 aaKnown RBP14.81□□□□□ -0.04
CTSA-218ENST00000607814 FZD5Q13467 585 aa14.81□□□□□ -0.04
CTSA-218ENST00000607814 PSMD5Q16401 504 aa14.81□□□□□ -0.04
CTSA-218ENST00000607814 XKR4Q5GH76 650 aa14.81□□□□□ -0.04
CTSA-218ENST00000607814 LAIR1Q6GTX8 287 aa14.81□□□□□ -0.04
CTSA-218ENST00000607814 TPRG1Q6ZUI0 275 aa14.81□□□□□ -0.04
CTSA-218ENST00000607814 NPAS3Q8IXF0 933 aa14.81□□□□□ -0.04
CTSA-218ENST00000607814 GRAMD1CQ8IYS0 662 aa14.81□□□□□ -0.04
CTSA-218ENST00000607814 ZSWIM2Q8NEG5 633 aa14.81□□□□□ -0.04
CTSA-218ENST00000607814 ITFG1Q8TB96 612 aa14.81□□□□□ -0.04
CTSA-218ENST00000607814 LNX1Q8TBB1 728 aaPredicted RBP14.81□□□□□ -0.04
CTSA-218ENST00000607814 DNASE1L2Q92874 299 aa14.81□□□□□ -0.04
CTSA-218ENST00000607814 KXD1Q9BQD3 176 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms