RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 CACNG4Q9UBN1 327 aa11.41□□□□□ -0.58
LINC01001-203ENST00000607448 DNM3Q9UQ16 869 aa11.41□□□□□ -0.58
LINC01001-203ENST00000607448 NPHP3-ACAD11A0A0J9YXS1 232 aa11.4□□□□□ -0.58
LINC01001-203ENST00000607448 C2orf71A6NGG8 1288 aa11.4□□□□□ -0.58
LINC01001-203ENST00000607448 MYMKA6NI61 221 aa11.4□□□□□ -0.58
LINC01001-203ENST00000607448 NRP1O14786 923 aa11.4□□□□□ -0.58
LINC01001-203ENST00000607448 INPPL1O15357 1258 aa11.4□□□□□ -0.58
LINC01001-203ENST00000607448 NPTX2P47972 431 aa11.4□□□□□ -0.58
LINC01001-203ENST00000607448 SLC12A3P55017 1021 aa11.4□□□□□ -0.58
LINC01001-203ENST00000607448 PEX3P56589 373 aa11.4□□□□□ -0.58
LINC01001-203ENST00000607448 KRT17Q04695 432 aa11.4□□□□□ -0.58
LINC01001-203ENST00000607448 PRPF4BQ13523 1007 aaKnown RBP11.4□□□□□ -0.58
LINC01001-203ENST00000607448 SPA17Q15506 151 aa11.4□□□□□ -0.58
LINC01001-203ENST00000607448 IQCEQ6IPM2 695 aa11.4□□□□□ -0.58
LINC01001-203ENST00000607448 COLGALT2Q8IYK4 626 aa11.4□□□□□ -0.58
LINC01001-203ENST00000607448 VPS52Q8N1B4 723 aa11.4□□□□□ -0.58
LINC01001-203ENST00000607448 DEPTORQ8TB45 409 aa11.4□□□□□ -0.58
LINC01001-203ENST00000607448 FEZF2Q8TBJ5 459 aa11.4□□□□□ -0.58
LINC01001-203ENST00000607448 URGCPQ8TCY9 931 aa11.4□□□□□ -0.58
LINC01001-203ENST00000607448 KIFAP3Q92845 792 aa11.4□□□□□ -0.58
LINC01001-203ENST00000607448 NT5C3AQ9H0P0 336 aa11.4□□□□□ -0.58
LINC01001-203ENST00000607448 NHEJ1Q9H9Q4 299 aaPredicted RBP11.4□□□□□ -0.58
LINC01001-203ENST00000607448 CDH22Q9UJ99 828 aa11.4□□□□□ -0.58
LINC01001-203ENST00000607448 GUCA1BQ9UMX6 200 aa11.4□□□□□ -0.58
LINC01001-203ENST00000607448 DENND4AQ7Z401 1863 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 MTCL1Q9Y4B5 1905 aaKnown RBP11.39□□□□□ -0.59
LINC01001-203ENST00000607448 ACKR2O00590 384 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 NCK2O43639 380 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 CA8P35219 290 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 VAV2P52735 878 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 EHHADHQ08426 723 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 DSC1Q08554 894 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 MCM6Q14566 821 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 SMAD2Q15796 467 aaKnown RBP11.39□□□□□ -0.59
LINC01001-203ENST00000607448 MAPK6Q16659 721 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 ARSHQ5FYA8 562 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 BEND6Q5SZJ8 279 aaPredicted RBP11.39□□□□□ -0.59
LINC01001-203ENST00000607448 WDR93Q6P2C0 686 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 DDX53Q86TM3 631 aaKnown RBP11.39□□□□□ -0.59
LINC01001-203ENST00000607448 SMRP1Q8NCR6 262 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 PPP2R3CQ969Q6 453 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 PAAF1Q9BRP4 392 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 NUCKS1Q9H1E3 243 aaKnown RBP11.39□□□□□ -0.59
LINC01001-203ENST00000607448 C2orf40Q9H1Z8 148 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 EPC1Q9H2F5 836 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 NDST4Q9H3R1 872 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 SNTG2Q9NY99 539 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 PARP2Q9UGN5 583 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 CD207Q9UJ71 328 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 SIK3Q9Y2K2 1263 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 PRG3Q9Y2Y8 225 aaPredicted RBP11.39□□□□□ -0.59
LINC01001-203ENST00000607448 SAR1BQ9Y6B6 198 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 STK24Q9Y6E0 443 aa11.39□□□□□ -0.59
LINC01001-203ENST00000607448 ANK1P16157 1881 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 TARSL2A2RTX5 802 aaKnown RBP11.38□□□□□ -0.59
LINC01001-203ENST00000607448 CCDC169A6NNP5 214 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 SASH3O75995 380 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 LCA5LO95447 670 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 GNA14O95837 355 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 SSBP05455 408 aaKnown RBP eCLIP11.38□□□□□ -0.59
LINC01001-203ENST00000607448 PLA2G4BP0C869 781 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 OAS2P29728 719 aaKnown RBP11.38□□□□□ -0.59
LINC01001-203ENST00000607448 OR1G1P47890 313 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 KIF5AQ12840 1032 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 COASYQ13057 564 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 PPP2R5AQ15172 486 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 MAP9Q49MG5 647 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 TAS1R1Q7RTX1 841 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 CEP120Q8N960 986 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 MRPL43Q8N983 215 aaKnown RBP11.38□□□□□ -0.59
LINC01001-203ENST00000607448 SYT2Q8N9I0 419 aaPredicted RBP11.38□□□□□ -0.59
LINC01001-203ENST00000607448 RSPH1Q8WYR4 309 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 RUBCNQ92622 972 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 IFT74Q96LB3 600 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 CCDC42Q96M95 316 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 APOL5Q9BWW9 433 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 SLC39A2Q9NP94 309 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 NGRNQ9NPE2 291 aaKnown RBP11.38□□□□□ -0.59
LINC01001-203ENST00000607448 UBN1Q9NPG3 1134 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 ARHGAP28Q9P2N2 729 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 GIT1Q9Y2X7 761 aa11.38□□□□□ -0.59
LINC01001-203ENST00000607448 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.37□□□□□ -0.59
LINC01001-203ENST00000607448 PTGESO14684 152 aa11.37□□□□□ -0.59
LINC01001-203ENST00000607448 SLC16A4O15374 487 aa11.37□□□□□ -0.59
LINC01001-203ENST00000607448 CLASP2O75122 1294 aaKnown RBP11.37□□□□□ -0.59
LINC01001-203ENST00000607448 RECQL4O94761 1208 aa11.37□□□□□ -0.59
LINC01001-203ENST00000607448 CXCL14O95715 111 aa11.37□□□□□ -0.59
LINC01001-203ENST00000607448 EFEMP2O95967 443 aa11.37□□□□□ -0.59
LINC01001-203ENST00000607448 CTSAP10619 480 aa11.37□□□□□ -0.59
LINC01001-203ENST00000607448 GUCY2CP25092 1073 aa11.37□□□□□ -0.59
LINC01001-203ENST00000607448 ZP2Q05996 745 aa11.37□□□□□ -0.59
LINC01001-203ENST00000607448 SMAD4Q13485 552 aaKnown RBP11.37□□□□□ -0.59
LINC01001-203ENST00000607448 NAB2Q15742 525 aa11.37□□□□□ -0.59
LINC01001-203ENST00000607448 ATF7IP2Q5U623 682 aa11.37□□□□□ -0.59
LINC01001-203ENST00000607448 PDE12Q6L8Q7 609 aaKnown RBP11.37□□□□□ -0.59
LINC01001-203ENST00000607448 TRIM58Q8NG06 486 aa11.37□□□□□ -0.59
LINC01001-203ENST00000607448 B3GALT6Q96L58 329 aa11.37□□□□□ -0.59
LINC01001-203ENST00000607448 CEP63Q96MT8 703 aa11.37□□□□□ -0.59
LINC01001-203ENST00000607448 FAM193BQ96PV7 902 aaPredicted RBP11.37□□□□□ -0.59
LINC01001-203ENST00000607448 CDCA3Q99618 268 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms