RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 KIFC3Q9BVG8 833 aa16.4■□□□□ 0.22
SSBP4-214ENST00000607020 TMEM134Q9H6X4 195 aa16.4■□□□□ 0.22
SSBP4-214ENST00000607020 C2orf42Q9NWW7 574 aa16.4■□□□□ 0.22
SSBP4-214ENST00000607020 GTF3C3Q9Y5Q9 886 aa16.4■□□□□ 0.22
SSBP4-214ENST00000607020 VWA8A3KMH1 1905 aa16.4■□□□□ 0.22
SSBP4-214ENST00000607020 CEP295Q9C0D2 2601 aa16.39■□□□□ 0.21
SSBP4-214ENST00000607020 OAZ2O95190 189 aa16.39■□□□□ 0.21
SSBP4-214ENST00000607020 MCF2P10911 925 aa16.39■□□□□ 0.21
SSBP4-214ENST00000607020 AASDHQ4L235 1098 aaPredicted RBP16.39■□□□□ 0.21
SSBP4-214ENST00000607020 PLA2G2CQ5R387 149 aa16.39■□□□□ 0.21
SSBP4-214ENST00000607020 HEATR6Q6AI08 1181 aaKnown RBP16.39■□□□□ 0.21
SSBP4-214ENST00000607020 RNF19BQ6ZMZ0 732 aa16.39■□□□□ 0.21
SSBP4-214ENST00000607020 TMC8Q8IU68 726 aa16.39■□□□□ 0.21
SSBP4-214ENST00000607020 ERMNQ8TAM6 284 aa16.39■□□□□ 0.21
SSBP4-214ENST00000607020 ACAP3Q96P50 834 aa16.39■□□□□ 0.21
SSBP4-214ENST00000607020 PCDHB8Q9UN66 801 aa16.39■□□□□ 0.21
SSBP4-214ENST00000607020 YIPF1Q9Y548 306 aa16.39■□□□□ 0.21
SSBP4-214ENST00000607020 PCDHGA5Q9Y5G8 931 aa16.39■□□□□ 0.21
SSBP4-214ENST00000607020 PHLPP2Q6ZVD8 1323 aa16.39■□□□□ 0.21
SSBP4-214ENST00000607020 ATRXP46100 2492 aa16.38■□□□□ 0.21
SSBP4-214ENST00000607020 SLC38A8A6NNN8 435 aa16.38■□□□□ 0.21
SSBP4-214ENST00000607020 EPN2O95208 641 aa16.38■□□□□ 0.21
SSBP4-214ENST00000607020 PROS1P07225 676 aa16.38■□□□□ 0.21
SSBP4-214ENST00000607020 PROZP22891 400 aa16.38■□□□□ 0.21
SSBP4-214ENST00000607020 SOX9P48436 509 aa16.38■□□□□ 0.21
SSBP4-214ENST00000607020 PLD1Q13393 1074 aa16.38■□□□□ 0.21
SSBP4-214ENST00000607020 SF3A2Q15428 464 aaKnown RBP16.38■□□□□ 0.21
SSBP4-214ENST00000607020 ARHGAP29Q52LW3 1261 aa16.38■□□□□ 0.21
SSBP4-214ENST00000607020 CACNA2D4Q7Z3S7 1137 aa16.38■□□□□ 0.21
SSBP4-214ENST00000607020 ARID3BQ8IVW6 561 aaPredicted RBP16.38■□□□□ 0.21
SSBP4-214ENST00000607020 DIS3L2Q8IYB7 885 aaKnown RBP16.38■□□□□ 0.21
SSBP4-214ENST00000607020 C12orf50Q8NA57 414 aaPredicted RBP16.38■□□□□ 0.21
SSBP4-214ENST00000607020 GAB3Q8WWW8 586 aa16.38■□□□□ 0.21
SSBP4-214ENST00000607020 TBC1D32Q96NH3 1257 aa16.38■□□□□ 0.21
SSBP4-214ENST00000607020 LRRC3BQ96PB8 259 aa16.38■□□□□ 0.21
SSBP4-214ENST00000607020 LSM14BQ9BX40 385 aaKnown RBP16.38■□□□□ 0.21
SSBP4-214ENST00000607020 MRPL4Q9BYD3 311 aaKnown RBP16.38■□□□□ 0.21
SSBP4-214ENST00000607020 DNAJC25Q9H1X3 360 aa16.38■□□□□ 0.21
SSBP4-214ENST00000607020 ARRDC1-AS1Q9H2J1 176 aa16.38■□□□□ 0.21
SSBP4-214ENST00000607020 SLITRK6Q9H5Y7 841 aa16.38■□□□□ 0.21
SSBP4-214ENST00000607020 ASB3Q9Y575 518 aa16.38■□□□□ 0.21
SSBP4-214ENST00000607020 ARID2Q68CP9 1835 aa16.38■□□□□ 0.21
SSBP4-214ENST00000607020 A0A1W2PRU2 124 aa16.37■□□□□ 0.21
SSBP4-214ENST00000607020 M0QZQ0 153 aa16.37■□□□□ 0.21
SSBP4-214ENST00000607020 ABLIM1O14639 778 aa16.37■□□□□ 0.21
SSBP4-214ENST00000607020 AXIN1O15169 862 aa16.37■□□□□ 0.21
SSBP4-214ENST00000607020 DTNBO60941 627 aa16.37■□□□□ 0.21
SSBP4-214ENST00000607020 AKAP3O75969 853 aa16.37■□□□□ 0.21
SSBP4-214ENST00000607020 MARCKSP29966 332 aaPredicted RBP16.37■□□□□ 0.21
SSBP4-214ENST00000607020 OSTNP61366 133 aa16.37■□□□□ 0.21
SSBP4-214ENST00000607020 STPG1Q5TH74 334 aa16.37■□□□□ 0.21
SSBP4-214ENST00000607020 HAUS6Q7Z4H7 955 aa16.37■□□□□ 0.21
SSBP4-214ENST00000607020 C18orf25Q96B23 403 aaPredicted RBP16.37■□□□□ 0.21
SSBP4-214ENST00000607020 ZC3H10Q96K80 434 aaKnown RBP16.37■□□□□ 0.21
SSBP4-214ENST00000607020 MKNK1Q9BUB5 465 aa16.37■□□□□ 0.21
SSBP4-214ENST00000607020 RXFP3Q9NSD7 469 aa16.37■□□□□ 0.21
SSBP4-214ENST00000607020 ARHGAP28Q9P2N2 729 aa16.37■□□□□ 0.21
SSBP4-214ENST00000607020 COL4A2P08572 1712 aa16.36■□□□□ 0.21
SSBP4-214ENST00000607020 FAM208BQ5VWN6 2430 aa16.36■□□□□ 0.21
SSBP4-214ENST00000607020 MEFVO15553 781 aaPredicted RBP16.36■□□□□ 0.21
SSBP4-214ENST00000607020 VNN2O95498 520 aa16.36■□□□□ 0.21
SSBP4-214ENST00000607020 FGF19O95750 216 aa16.36■□□□□ 0.21
SSBP4-214ENST00000607020 CPB1P15086 417 aa16.36■□□□□ 0.21
SSBP4-214ENST00000607020 MCM4P33991 863 aa16.36■□□□□ 0.21
SSBP4-214ENST00000607020 NPTX2P47972 431 aa16.36■□□□□ 0.21
SSBP4-214ENST00000607020 EPHB3P54753 998 aa16.36■□□□□ 0.21
SSBP4-214ENST00000607020 PLCB2Q00722 1185 aa16.36■□□□□ 0.21
SSBP4-214ENST00000607020 GPR17Q13304 367 aa16.36■□□□□ 0.21
SSBP4-214ENST00000607020 ORC2Q13416 577 aaPredicted RBP16.36■□□□□ 0.21
SSBP4-214ENST00000607020 ZNF568Q3ZCX4 644 aa16.36■□□□□ 0.21
SSBP4-214ENST00000607020 TAS1R3Q7RTX0 852 aa16.36■□□□□ 0.21
SSBP4-214ENST00000607020 FAM200AQ8TCP9 573 aa16.36■□□□□ 0.21
SSBP4-214ENST00000607020 TARS2Q9BW92 718 aaKnown RBP16.36■□□□□ 0.21
SSBP4-214ENST00000607020 POLD4Q9HCU8 107 aa16.36■□□□□ 0.21
SSBP4-214ENST00000607020 GTSE1Q9NYZ3 720 aa16.36■□□□□ 0.21
SSBP4-214ENST00000607020 RBM19Q9Y4C8 960 aaKnown RBP16.36■□□□□ 0.21
SSBP4-214ENST00000607020 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.36■□□□□ 0.21
SSBP4-214ENST00000607020 OR6C75A6NL08 312 aa16.35■□□□□ 0.21
SSBP4-214ENST00000607020 EXTL3O43909 919 aa16.35■□□□□ 0.21
SSBP4-214ENST00000607020 RPP40O75818 363 aaKnown RBP16.35■□□□□ 0.21
SSBP4-214ENST00000607020 KCNK5O95279 499 aa16.35■□□□□ 0.21
SSBP4-214ENST00000607020 HOXC13P31276 330 aa16.35■□□□□ 0.21
SSBP4-214ENST00000607020 MCM7P33993 719 aa16.35■□□□□ 0.21
SSBP4-214ENST00000607020 AARSP49588 968 aaKnown RBP eCLIP16.35■□□□□ 0.214e-6■■■■■ 38
SSBP4-214ENST00000607020 YWHAHQ04917 246 aaPredicted RBP16.35■□□□□ 0.21
SSBP4-214ENST00000607020 PON2Q15165 354 aa16.35■□□□□ 0.21
SSBP4-214ENST00000607020 ANKRD1Q15327 319 aa16.35■□□□□ 0.21
SSBP4-214ENST00000607020 ECM1Q16610 540 aa16.35■□□□□ 0.21
SSBP4-214ENST00000607020 SLC10A6Q3KNW5 377 aa16.35■□□□□ 0.21
SSBP4-214ENST00000607020 MPZL3Q6UWV2 235 aa16.35■□□□□ 0.21
SSBP4-214ENST00000607020 GAREM2Q75VX8 874 aa16.35■□□□□ 0.21
SSBP4-214ENST00000607020 BHMT2Q9H2M3 363 aa16.35■□□□□ 0.21
SSBP4-214ENST00000607020 CRISPLD1Q9H336 500 aa16.35■□□□□ 0.21
SSBP4-214ENST00000607020 HSFX1Q9UBD0 423 aa16.35■□□□□ 0.21
SSBP4-214ENST00000607020 CCDC169A6NNP5 214 aa16.34■□□□□ 0.21
SSBP4-214ENST00000607020 DPYSL4O14531 572 aa16.34■□□□□ 0.21
SSBP4-214ENST00000607020 ATG13O75143 517 aa16.34■□□□□ 0.21
SSBP4-214ENST00000607020 OR52Z1P0C646 297 aa16.34■□□□□ 0.21
SSBP4-214ENST00000607020 KCNA4P22459 653 aa16.34■□□□□ 0.21
SSBP4-214ENST00000607020 LRPAP1P30533 357 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms