RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 MLF2Q15773 248 aaPredicted RBP8.28□□□□□ -1.08
CUX1-219ENST00000606749 ZC2HC1CQ53FD0 456 aaPredicted RBP8.28□□□□□ -1.08
CUX1-219ENST00000606749 CYP4A22Q5TCH4 519 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 SPATA1Q5VX52 437 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 JADE1Q6IE81 842 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 IQCEQ6IPM2 695 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 DSTYKQ6XUX3 929 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 ZNF720Q7Z2F6 126 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 USP37Q86T82 979 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 CD302Q8IX05 232 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 ELMOD1Q8N336 334 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 KRI1Q8N9T8 703 aaKnown RBP8.28□□□□□ -1.08
CUX1-219ENST00000606749 RASSF8Q8NHQ8 419 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 LARP4BQ92615 738 aaKnown RBP8.28□□□□□ -1.08
CUX1-219ENST00000606749 ELSPBP1Q96BH3 223 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 FAM212AQ96EL1 285 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 ZSWIM3Q96MP5 696 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 MSTO1Q9BUK6 570 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 OXCT2Q9BYC2 517 aaPredicted RBP8.28□□□□□ -1.08
CUX1-219ENST00000606749 SEMA4AQ9H3S1 761 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 ST6GALNAC4Q9H4F1 302 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 ZFP14Q9HCL3 533 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 CPSF3Q9UKF6 684 aaKnown RBP8.28□□□□□ -1.08
CUX1-219ENST00000606749 ANO9A1A5B4 782 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 OR6C75A6NL08 312 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 PIRO00625 290 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 PPEF2O14830 753 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 TBCAO75347 108 aaKnown RBP8.27□□□□□ -1.09
CUX1-219ENST00000606749 MOSPD3O75425 235 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 NFICP08651 508 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 OR4Q2P0C623 313 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 SP9P0CG40 484 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 CPB1P15086 417 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 TYMPP19971 482 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 PDCP20941 246 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 SYT1P21579 422 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 CD72P21854 359 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 PAX3P23760 479 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 FCARP24071 287 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 ABCD1P33897 745 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 ACOT2P49753 483 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 EPHA5P54756 1037 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 DUSP4Q13115 394 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 GPR17Q13304 367 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 FAM78AQ5JUQ0 283 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 C9orf57Q5W0N0 161 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 OVOS1Q6IE37 1185 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 SLFN12LQ6IEE8 588 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 FAM173BQ6P4H8 233 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 PDZD4Q76G19 769 aaPredicted RBP8.27□□□□□ -1.09
CUX1-219ENST00000606749 DYMQ7RTS9 669 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 MAP4K3Q8IVH8 894 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 MAML2Q8IZL2 1156 aaPredicted RBP8.27□□□□□ -1.09
CUX1-219ENST00000606749 ADSSL1Q8N142 457 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 SENP8Q96LD8 212 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 ASB16Q96NS5 453 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 CLIC6Q96NY7 704 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 PGLYRP2Q96PD5 576 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 NELL2Q99435 816 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 STRA6Q9BX79 667 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 OSBPL6Q9BZF3 934 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 ASB7Q9H672 318 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 STK17AQ9UEE5 414 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 CCDC39Q9UFE4 941 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 FBXO2Q9UK22 296 aaPredicted RBP8.27□□□□□ -1.09
CUX1-219ENST00000606749 DERAQ9Y315 318 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 SRPRBQ9Y5M8 271 aaKnown RBP8.27□□□□□ -1.09
CUX1-219ENST00000606749 STYXL1Q9Y6J8 313 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 MYO15AQ9UKN7 3530 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 MYH15Q9Y2K3 1946 aa8.27□□□□□ -1.09
CUX1-219ENST00000606749 ZFHX2Q9C0A1 2572 aaPredicted RBP8.26□□□□□ -1.09
CUX1-219ENST00000606749 PDCD11Q14690 1871 aaKnown RBP8.26□□□□□ -1.09
CUX1-219ENST00000606749 MYMKA6NI61 221 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 SHISA7A6NL88 538 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 TISP43B9A030 160 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 SPTLC1O15269 473 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 PPP1R37O75864 691 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 MYL4P12829 197 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 GJA1P17302 382 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 ADSSP30520 456 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 ALDH1A3P47895 512 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 POU5F1Q01860 360 aaKnown RBP8.26□□□□□ -1.09
CUX1-219ENST00000606749 CEBPZQ03701 1054 aaKnown RBP8.26□□□□□ -1.09
CUX1-219ENST00000606749 RESTQ13127 1097 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 FZD5Q13467 585 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 MYBPC2Q14324 1141 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 GRM2Q14416 872 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 TMEM132DQ14C87 1099 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 UBXN2BQ14CS0 331 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 POSTNQ15063 836 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 RRAGBQ5VZM2 374 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 ADALQ6DHV7 355 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 CENPPQ6IPU0 288 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 CRELD2Q6UXH1 353 aaPredicted RBP8.26□□□□□ -1.09
CUX1-219ENST00000606749 TPRG1Q6ZUI0 275 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 SV2BQ7L1I2 683 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 SFR1Q86XK3 245 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 ATAD1Q8NBU5 361 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 LEMD2Q8NC56 503 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 SMARCD2Q92925 531 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms