RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 SLIT1O75093 1534 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 PI4KAP2A4QPH2 592 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 SLC22A31A6NKX4 558 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 SIGLEC16A6NMB1 481 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 CHURC1-FNTBB4DL54 471 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 KCNJ18B7U540 433 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 CCDC188H7C350 402 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 CPLX1O14810 134 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 WDR46O15213 610 aaKnown RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 FOXN1O15353 648 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 BIRC5O15392 142 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 HNRNPCL1O60812 293 aaKnown RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 CILPO75339 1184 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 TMCC1O94876 653 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 SUN1O94901 812 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 HEXIM1O94992 359 aaKnown RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZFYP08048 801 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 VIL1P09327 827 aaKnown RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 PARP1P09874 1014 aaKnown RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 TPBGLP0DKB5 382 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 PNLIPP16233 465 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 DESP17661 470 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 ENDOUP21128 410 aaKnown RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 FBLN1P23142 703 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 ECHS1P30084 290 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 ST13P50502 369 aaKnown RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 TOB1P50616 345 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 RCAN1P53805 252 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 RPL26P61254 145 aaKnown RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 TNNC1P63316 161 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 SLC7A5Q01650 507 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 CAMK2GQ13555 558 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 PWP1Q13610 501 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 ITGA9Q13797 1035 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 KCNJ12Q14500 433 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 PPP2R5BQ15173 497 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 SPA17Q15506 151 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 UAP1Q16222 522 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 NTRK3Q16288 839 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 ASTE1Q2TB18 679 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 Q4G0T1 1027 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 COBLL1Q53SF7 1204 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 EPHA10Q5JZY3 1008 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZNF658Q5TYW1 1059 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 KLHDC7AQ5VTJ3 777 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 GALNT18Q6P9A2 607 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 TMEM154Q6P9G4 183 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 RINLQ6ZS11 566 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 CCDC80Q76M96 950 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 HOOK3Q86VS8 718 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 NME9Q86XW9 330 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 GSPT2Q8IYD1 628 aaKnown RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZNF655Q8N720 491 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 PI4KAP1Q8N8J0 262 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 SMC1BQ8NDV3 1235 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 IL17REQ8NFR9 667 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 ACTRT1Q8TDG2 376 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 PIGOQ8TEQ8 1089 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 FBXO41Q8TF61 875 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 MZB1Q8WU39 189 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 C17orf50Q8WW18 174 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 SYN2Q92777 582 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 SLC35B4Q969S0 331 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 GFM2Q969S9 779 aaKnown RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 KLHL29Q96CT2 875 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 SHISA4Q96DD7 197 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 TCTN2Q96GX1 697 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 KAZALD1Q96I82 304 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZNF333Q96JL9 665 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 CAPZA3Q96KX2 299 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 FGD4Q96M96 766 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 MPHOSPH6Q99547 160 aaKnown RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 NDNQ99608 321 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 ALG1Q9BT22 464 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 HDAC8Q9BY41 377 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 ROPN1BQ9BZX4 212 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 BRD8Q9H0E9 1235 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 CCDC8Q9H0W5 538 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 STMN4Q9H169 189 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 BHMT2Q9H2M3 363 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 PHAXQ9H814 394 aaKnown RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 DCLRE1BQ9H816 532 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 ROPN1Q9HAT0 212 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 RXFP1Q9HBX9 757 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 NCOA5Q9HCD5 579 aaKnown RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 RBM12Q9NTZ6 932 aaKnown RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 TBCCD1Q9NVR7 557 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 CYP39A1Q9NYL5 469 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 SAMD15Q9P1V8 674 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 TRIM10Q9UDY6 481 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 EBF1Q9UH73 591 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 SCOCQ9UIL1 159 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 AGAP1Q9UPQ3 857 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 ARL2BPQ9Y2Y0 163 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 USP15Q9Y4E8 981 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 PCDHA13Q9Y5I0 950 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 ABCB11O95342 1321 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 PDS5AQ29RF7 1337 aaKnown RBP4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 IGSF1Q8N6C5 1336 aa4.38□□□□□ -1.71
HMGB1P50-201ENST00000605814 TMEM131LA2VDJ0 1609 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms