RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 STXBP5Q5T5C0 1151 aa12.92□□□□□ -0.34
PDLIM1P1-201ENST00000604187 ATF7IP2Q5U623 682 aa12.92□□□□□ -0.34
PDLIM1P1-201ENST00000604187 ZNF280DQ6N043 979 aa12.92□□□□□ -0.34
PDLIM1P1-201ENST00000604187 PKN3Q6P5Z2 889 aa12.92□□□□□ -0.34
PDLIM1P1-201ENST00000604187 SYNPOQ8N3V7 929 aa12.92□□□□□ -0.34
PDLIM1P1-201ENST00000604187 NOTCH4Q99466 2003 aa12.92□□□□□ -0.34
PDLIM1P1-201ENST00000604187 LARP6Q9BRS8 491 aaKnown RBP12.92□□□□□ -0.34
PDLIM1P1-201ENST00000604187 EDEM2Q9BV94 578 aa12.92□□□□□ -0.34
PDLIM1P1-201ENST00000604187 GPR88Q9GZN0 384 aa12.92□□□□□ -0.34
PDLIM1P1-201ENST00000604187 YIPF1Q9Y548 306 aa12.92□□□□□ -0.34
PDLIM1P1-201ENST00000604187 MTCL1Q9Y4B5 1905 aaKnown RBP12.92□□□□□ -0.34
PDLIM1P1-201ENST00000604187 NAMPTP43490 491 aa12.91□□□□□ -0.34
PDLIM1P1-201ENST00000604187 YARSP54577 528 aaKnown RBP12.91□□□□□ -0.34
PDLIM1P1-201ENST00000604187 TNK2Q07912 1038 aa12.91□□□□□ -0.34
PDLIM1P1-201ENST00000604187 CALCRLQ16602 461 aa12.91□□□□□ -0.34
PDLIM1P1-201ENST00000604187 RNF19BQ6ZMZ0 732 aa12.91□□□□□ -0.34
PDLIM1P1-201ENST00000604187 HAUS6Q7Z4H7 955 aa12.91□□□□□ -0.34
PDLIM1P1-201ENST00000604187 ARID3BQ8IVW6 561 aaPredicted RBP12.91□□□□□ -0.34
PDLIM1P1-201ENST00000604187 CEP120Q8N960 986 aa12.91□□□□□ -0.34
PDLIM1P1-201ENST00000604187 YTHDC1Q96MU7 727 aaKnown RBP12.91□□□□□ -0.34
PDLIM1P1-201ENST00000604187 LRRC3BQ96PB8 259 aa12.91□□□□□ -0.34
PDLIM1P1-201ENST00000604187 TMEM121BQ9BXQ6 578 aaPredicted RBP12.91□□□□□ -0.34
PDLIM1P1-201ENST00000604187 ADAM33Q9BZ11 813 aa12.91□□□□□ -0.34
PDLIM1P1-201ENST00000604187 TTC12Q9H892 705 aaPredicted RBP12.91□□□□□ -0.34
PDLIM1P1-201ENST00000604187 TOPORSQ9NS56 1045 aaPredicted RBP12.91□□□□□ -0.34
PDLIM1P1-201ENST00000604187 SLC38A7Q9NVC3 462 aa12.91□□□□□ -0.34
PDLIM1P1-201ENST00000604187 WDR81Q562E7 1941 aa12.91□□□□□ -0.34
PDLIM1P1-201ENST00000604187 CCDC163A0A0D9SF12 145 aa12.9□□□□□ -0.34
PDLIM1P1-201ENST00000604187 C4orf47A7E2U8 309 aa12.9□□□□□ -0.34
PDLIM1P1-201ENST00000604187 DPYSL4O14531 572 aa12.9□□□□□ -0.34
PDLIM1P1-201ENST00000604187 DTNBO60941 627 aa12.9□□□□□ -0.34
PDLIM1P1-201ENST00000604187 AKAP3O75969 853 aa12.9□□□□□ -0.34
PDLIM1P1-201ENST00000604187 XRCC6P12956 609 aaKnown RBP eCLIP12.9□□□□□ -0.34
PDLIM1P1-201ENST00000604187 XBP1P17861 261 aa12.9□□□□□ -0.34
PDLIM1P1-201ENST00000604187 TXKP42681 527 aa12.9□□□□□ -0.34
PDLIM1P1-201ENST00000604187 OSTNP61366 133 aa12.9□□□□□ -0.34
PDLIM1P1-201ENST00000604187 ARHGAP29Q52LW3 1261 aa12.9□□□□□ -0.34
PDLIM1P1-201ENST00000604187 NT5DC1Q5TFE4 455 aa12.9□□□□□ -0.34
PDLIM1P1-201ENST00000604187 APBB1IPQ7Z5R6 666 aaPredicted RBP12.9□□□□□ -0.34
PDLIM1P1-201ENST00000604187 TMC8Q8IU68 726 aa12.9□□□□□ -0.34
PDLIM1P1-201ENST00000604187 ZMAT2Q96NC0 199 aaKnown RBP12.9□□□□□ -0.34
PDLIM1P1-201ENST00000604187 CCDC94Q9BW85 323 aaPredicted RBP12.9□□□□□ -0.34
PDLIM1P1-201ENST00000604187 LRRC3Q9BY71 257 aa12.9□□□□□ -0.34
PDLIM1P1-201ENST00000604187 MAFFQ9ULX9 164 aa12.9□□□□□ -0.34
PDLIM1P1-201ENST00000604187 SLC8A2Q9UPR5 921 aa12.9□□□□□ -0.34
PDLIM1P1-201ENST00000604187 WASF3Q9UPY6 502 aa12.9□□□□□ -0.34
PDLIM1P1-201ENST00000604187 NBEAQ8NFP9 2946 aa12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 TMEM8BA6NDV4 472 aa12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 SRRM3A6NNA2 597 aaPredicted RBP12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 NEMFO60524 1076 aa12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 PRAMEF12O95522 483 aa12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 TOP3BO95985 862 aaKnown RBP12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 SPATA31C1P0DKV0 1188 aa12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 MCM4P33991 863 aa12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 GRM5P41594 1212 aa12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 EFNA5P52803 228 aa12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 NR5A1Q13285 461 aa12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 PPP2R5AQ15172 486 aa12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 PLK5Q496M5 336 aa12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 SH3PXD2AQ5TCZ1 1133 aa12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 PADI6Q6TGC4 694 aa12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 RUFY3Q7L099 469 aa12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 APPL2Q8NEU8 664 aa12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 ZCCHC14Q8WYQ9 949 aaKnown RBP12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 C18orf25Q96B23 403 aaPredicted RBP12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 ZNF274Q96GC6 653 aaPredicted RBP12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 ZC3H10Q96K80 434 aaKnown RBP12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 SUSD3Q96L08 255 aa12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 PGLYRP2Q96PD5 576 aa12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 DNAJC25Q9H1X3 360 aa12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 CDT1Q9H211 546 aa12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 POLR3BQ9NW08 1133 aaPredicted RBP12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 TDRD15B5MCY1 1934 aaKnown RBP12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 LAMA1P25391 3075 aa12.89□□□□□ -0.35
PDLIM1P1-201ENST00000604187 SDK1Q7Z5N4 2213 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 ARHGEF35A5YM69 484 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 CDKL5O76039 1030 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 VNN2O95498 520 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 OR4Q2P0C623 313 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 CYP11B2P19099 503 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 RPL9P32969 192 aaKnown RBP12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 EPHB3P54753 998 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 CREB5Q02930 508 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 RING1Q06587 406 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 PLD1Q13393 1074 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 ELF2Q15723 593 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 ITPRIPL2Q3MIP1 535 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 ZNF568Q3ZCX4 644 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 XKR4Q5GH76 650 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 DAB2IPQ5VWQ8 1189 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 ALKAL1Q6UXT8 129 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 CATSPER3Q86XQ3 398 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 DDX12PQ92771 950 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 GATA6Q92908 595 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 TBC1D32Q96NH3 1257 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 HHIPQ96QV1 700 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 TMEM209Q96SK2 561 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 MKNK1Q9BUB5 465 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 DUSP15Q9H1R2 295 aaPredicted RBP12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 CRISPLD1Q9H336 500 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms