RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 CASP10Q92851 521 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 KISS1RQ969F8 398 aaPredicted RBP5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 ZUFSPQ96AP4 578 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 CHAMP1Q96JM3 812 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 HSH2DQ96JZ2 352 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 SPATA17Q96L03 361 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 DACH2Q96NX9 599 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 ARHGAP39Q9C0H5 1083 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 ANKRD2Q9GZV1 360 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 AP5M1Q9H0R1 490 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 MAGEH1Q9H213 219 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 BICC1Q9H694 974 aaKnown RBP5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 SPON1Q9HCB6 807 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 GJB4Q9NTQ9 266 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 GALNT8Q9NY28 637 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 AATFQ9NY61 560 aaKnown RBP eCLIP5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 AIPL1Q9NZN9 384 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 LRFN1Q9P244 771 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 DKK3Q9UBP4 350 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 A0A0G2JPF8 293 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 HNRNPCL3B7ZW38 293 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 ENC1O14682 589 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 MGRN1O60291 552 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 MGEA5O60502 916 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 GREM1O60565 184 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 KCNJ13O60928 360 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 DDX58O95786 925 aaKnown RBP5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 APBA3O96018 575 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 ATP5BP06576 529 aaKnown RBP5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 SNRPA1P09661 255 aaKnown RBP5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 LINGO3P0C6S8 592 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 HNRNPCL4P0DMR1 293 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 CTSSP25774 331 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 CDC25CP30307 473 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 PRKAR2BP31323 418 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 GRIA2P42262 883 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 HNMTP50135 292 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 ITGA8P53708 1063 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 RARSP54136 660 aaKnown RBP5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 POU4F2Q12837 409 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 SLC14A1Q13336 389 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 DRP2Q13474 957 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 SUZ12Q15022 739 aaKnown RBP5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 GPR162Q16538 588 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 SNAP47Q5SQN1 464 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 LMBR1LQ6UX01 489 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 ANGPTL8Q6UXH0 198 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 PLEKHM3Q6ZWE6 761 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 LRRTM4Q86VH4 590 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 LINC00528Q8N1L1 170 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 CEP76Q8TAP6 659 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 CCHCR1Q8TD31 782 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 LRRC59Q96AG4 307 aaKnown RBP5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 ZFP42Q96MM3 310 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 ACAP3Q96P50 834 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 MENTQ9BUN1 341 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 PHF20Q9BVI0 1012 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 CCDC106Q9BWC9 280 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 USP26Q9BXU7 913 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 EMILIN2Q9BXX0 1053 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 PACSIN1Q9BY11 444 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 MTMR12Q9C0I1 747 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 TIMM22Q9Y584 194 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 MST1RQ04912 1400 aa5.35□□□□□ -1.55
SPTBN1-206ENST00000602898 MAN1A2O60476 641 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 TSC22D2O75157 780 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 LUC7L3O95232 432 aaKnown RBP5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 CELA3AP09093 270 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 RPS2P15880 293 aaKnown RBP5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 ENDOUP21128 410 aaKnown RBP5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 ALAS2P22557 587 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 MAPK3P27361 379 aaPredicted RBP5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 CDC25BP30305 580 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 TUBA1BP68363 451 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 TFAP4Q01664 338 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 ACTN3Q08043 901 aaPredicted RBP5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 PPIDQ08752 370 aaKnown RBP5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 BLMHQ13867 455 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 ERV3-1Q14264 604 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 PLCL1Q15111 1095 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 TSTQ16762 297 aaKnown RBP5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 TMEM266Q2M3C6 531 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 INAVAQ3KP66 663 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 CCDC40Q4G0X9 1142 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 SH2D4BQ5SQS7 431 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 OLFML2BQ68BL8 750 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 MTFR2Q6P444 385 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 TUBA1AQ71U36 451 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 RUFY3Q7L099 469 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 HDXQ7Z353 690 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 ATG9AQ7Z3C6 839 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 CAND1Q86VP6 1230 aaKnown RBP5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 CPOQ8IVL8 374 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 PPM1KQ8N3J5 372 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 LINS1Q8NG48 757 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 SLC7A14Q8TBB6 771 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 MDM1Q8TC05 714 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 FAM193BQ96PV7 902 aaPredicted RBP5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 PRAM1Q96QH2 718 aa5.34□□□□□ -1.55
SPTBN1-206ENST00000602898 UPF3BQ9BZI7 483 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms