RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 CABYRO75952 493 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 MDH1P40925 334 aaKnown RBP11.69□□□□□ -0.54
ZNF558-207ENST00000601372 BTG3Q14201 252 aaPredicted RBP11.69□□□□□ -0.54
ZNF558-207ENST00000601372 PLCB4Q15147 1175 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 NUDT18Q6ZVK8 323 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 DDX53Q86TM3 631 aaKnown RBP11.69□□□□□ -0.54
ZNF558-207ENST00000601372 TMEM35BQ8NCS4 154 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 NKX2-3Q8TAU0 364 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 PYROXD1Q8WU10 500 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 UBN1Q9NPG3 1134 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 SMYD2Q9NRG4 433 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 IPO11Q9UI26 975 aaKnown RBP11.69□□□□□ -0.54
ZNF558-207ENST00000601372 SSU72P8A0A1W2PR75 194 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 CPP00450 1065 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 ODC1P11926 461 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 GUCY2CP25092 1073 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 SOX10P56693 466 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 LAMTOR4Q0VGL1 99 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 NCOA4Q13772 614 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 IFNL1Q8IU54 200 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 REPS2Q8NFH8 660 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 MKL1Q969V6 931 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 STK33Q9BYT3 514 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 ABI2Q9NYB9 513 aaPredicted RBP11.69□□□□□ -0.54
ZNF558-207ENST00000601372 URODP06132 367 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 SEMA3FQ13275 785 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 FAM110CQ1W6H9 321 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 EPC2Q52LR7 807 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 TTC39CQ8N584 583 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 SLAIN1Q8ND83 568 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 FBXL13Q8NEE6 735 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 EPN3Q9H201 632 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.68□□□□□ -0.54
ZNF558-207ENST00000601372 NWD2Q9ULI1 1742 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 MIF4GDA9UHW6 222 aaKnown RBP11.68□□□□□ -0.54
ZNF558-207ENST00000601372 EXTL3O43909 919 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 ARHGAP15Q53QZ3 475 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 PPP6R3Q5H9R7 873 aaPredicted RBP11.68□□□□□ -0.54
ZNF558-207ENST00000601372 CYP2W1Q8TAV3 490 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 MAML1Q92585 1016 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 WNT8AQ9H1J5 351 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 TBX20Q9UMR3 447 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 POMCP01189 267 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 MT-ND3P03897 115 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 PON1P27169 355 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 CASP4P49662 377 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 IKBKEQ14164 716 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 CELF3Q5SZQ8 465 aaKnown RBP11.68□□□□□ -0.54
ZNF558-207ENST00000601372 PGBD3Q8N328 593 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 USP38Q8NB14 1042 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 CFAP61Q8NHU2 1237 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 PARD3BQ8TEW8 1205 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 ELMO3Q96BJ8 720 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 ECT2Q9H8V3 914 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 DPP3Q9NY33 737 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 CCDC195A0A1B0GUA6 201 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 RTN2O75298 545 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 TJP3O95049 919 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 KITP10721 976 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 CHN1P15882 459 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 PEX19P40855 299 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 FSTL1Q12841 308 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 DCP1BQ8IZD4 617 aaKnown RBP11.68□□□□□ -0.54
ZNF558-207ENST00000601372 ATP8B4Q8TF62 1192 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 PI4K2AQ9BTU6 479 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 PCSK1NQ9UHG2 260 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 CASTOR2A6NHX0 329 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 NEMP1O14524 444 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 PFDN6O15212 129 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 SART1O43290 800 aaKnown RBP11.68□□□□□ -0.54
ZNF558-207ENST00000601372 B3GAT3O94766 335 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 CA4P22748 312 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 CHRNA3P32297 505 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 NAMPTP43490 491 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 PSMC6P62333 389 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 CRHR2Q13324 411 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 N4BP2L2Q92802 583 aaPredicted RBP11.68□□□□□ -0.54
ZNF558-207ENST00000601372 PITPNM3Q9BZ71 974 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 ARHGAP20Q9P2F6 1191 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 H7C4K7 107 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 PEX10O60683 326 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 TOM1L1O75674 476 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 ITGB3P05106 788 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 LGALS2P05162 132 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 SEC24CP53992 1094 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 MMGT1Q8N4V1 131 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 SYT2Q8N9I0 419 aaPredicted RBP11.68□□□□□ -0.54
ZNF558-207ENST00000601372 KCNV2Q8TDN2 545 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 DEPDC1BQ8WUY9 529 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 SNF8Q96H20 258 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 L3MBTL3Q96JM7 780 aaPredicted RBP11.68□□□□□ -0.54
ZNF558-207ENST00000601372 SYNPO2Q9UMS6 1093 aa11.68□□□□□ -0.54
ZNF558-207ENST00000601372 CYBBP04839 570 aa11.67□□□□□ -0.54
ZNF558-207ENST00000601372 PDCD6IPQ8WUM4 868 aaKnown RBP11.67□□□□□ -0.54
ZNF558-207ENST00000601372 FAF2Q96CS3 445 aa11.67□□□□□ -0.54
ZNF558-207ENST00000601372 MROH7Q68CQ1 1323 aa11.67□□□□□ -0.54
ZNF558-207ENST00000601372 A0A087X0T9 212 aa11.67□□□□□ -0.54
ZNF558-207ENST00000601372 GIPC1O14908 333 aa11.67□□□□□ -0.54
ZNF558-207ENST00000601372 APOEP02649 317 aa11.67□□□□□ -0.54
ZNF558-207ENST00000601372 FAM228BP0C875 321 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms