RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 TMEM189-UBE2V1I3L0A0 370 aa21.97■■□□□ 1.11
PNKP-215ENST00000600910 LAG3P18627 525 aa21.97■■□□□ 1.11
PNKP-215ENST00000600910 ZNF667Q5HYK9 610 aa21.97■■□□□ 1.11
PNKP-215ENST00000600910 PHLDB3Q6NSJ2 640 aa21.97■■□□□ 1.11
PNKP-215ENST00000600910 KCNT2Q6UVM3 1135 aa21.97■■□□□ 1.11
PNKP-215ENST00000600910 CD300LGQ6UXG3 332 aa21.97■■□□□ 1.11
PNKP-215ENST00000600910 VSTM4Q8IW00 320 aa21.97■■□□□ 1.11
PNKP-215ENST00000600910 ARHGEF19Q8IW93 802 aa21.97■■□□□ 1.11
PNKP-215ENST00000600910 ZNF558Q96NG5 402 aa21.97■■□□□ 1.11
PNKP-215ENST00000600910 COLEC11Q9BWP8 271 aa21.97■■□□□ 1.11
PNKP-215ENST00000600910 PRO3102Q9H379 93 aa21.97■■□□□ 1.11
PNKP-215ENST00000600910 PLCB1Q9NQ66 1216 aa21.97■■□□□ 1.11
PNKP-215ENST00000600910 MARCH5Q9NX47 278 aa21.97■■□□□ 1.11
PNKP-215ENST00000600910 NXF1Q9UBU9 619 aaKnown RBP21.97■■□□□ 1.11
PNKP-215ENST00000600910 GBF1Q92538 1859 aa21.97■■□□□ 1.11
PNKP-215ENST00000600910 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.96■■□□□ 1.11
PNKP-215ENST00000600910 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.96■■□□□ 1.11
PNKP-215ENST00000600910 LINC00271P0C7V0 271 aa21.96■■□□□ 1.11
PNKP-215ENST00000600910 KLHDC7AQ5VTJ3 777 aa21.96■■□□□ 1.11
PNKP-215ENST00000600910 GJB7Q6PEY0 223 aa21.96■■□□□ 1.11
PNKP-215ENST00000600910 TMEM173Q86WV6 379 aaPredicted RBP21.96■■□□□ 1.11
PNKP-215ENST00000600910 PPM1KQ8N3J5 372 aa21.96■■□□□ 1.11
PNKP-215ENST00000600910 COLGALT1Q8NBJ5 622 aa21.96■■□□□ 1.11
PNKP-215ENST00000600910 NEK11Q8NG66 645 aa21.96■■□□□ 1.11
PNKP-215ENST00000600910 CLP1Q92989 425 aaKnown RBP21.96■■□□□ 1.11
PNKP-215ENST00000600910 POLIQ9UNA4 740 aa21.96■■□□□ 1.11
PNKP-215ENST00000600910 SNX9Q9Y5X1 595 aa21.96■■□□□ 1.11
PNKP-215ENST00000600910 KIAA1671Q9BY89 1806 aa21.96■■□□□ 1.11
PNKP-215ENST00000600910 EPHB6O15197 1021 aa21.95■■□□□ 1.1
PNKP-215ENST00000600910 TADA2AO75478 443 aa21.95■■□□□ 1.1
PNKP-215ENST00000600910 NOL4O94818 638 aa21.95■■□□□ 1.1
PNKP-215ENST00000600910 BRCC3P46736 316 aa21.95■■□□□ 1.1
PNKP-215ENST00000600910 AARSP49588 968 aaKnown RBP eCLIP21.95■■□□□ 1.1
PNKP-215ENST00000600910 TNNC1P63316 161 aa21.95■■□□□ 1.1
PNKP-215ENST00000600910 SPECC1LQ69YQ0 1117 aa21.95■■□□□ 1.1
PNKP-215ENST00000600910 RRAGAQ7L523 313 aa21.95■■□□□ 1.1
PNKP-215ENST00000600910 NIF3L1Q9GZT8 377 aa21.95■■□□□ 1.1
PNKP-215ENST00000600910 GANQ9H2C0 597 aa21.95■■□□□ 1.1
PNKP-215ENST00000600910 GDAP2Q9NXN4 497 aa21.95■■□□□ 1.1
PNKP-215ENST00000600910 ADAM28Q9UKQ2 775 aa21.95■■□□□ 1.1
PNKP-215ENST00000600910 PCDHA11Q9Y5I1 949 aa21.95■■□□□ 1.1
PNKP-215ENST00000600910 ITIH6Q6UXX5 1313 aa21.95■■□□□ 1.1
PNKP-215ENST00000600910 UCHL3P15374 230 aa21.95■■□□□ 1.1
PNKP-215ENST00000600910 TRIM21P19474 475 aaKnown RBP21.95■■□□□ 1.1
PNKP-215ENST00000600910 TIGD5Q53EQ6 642 aa21.95■■□□□ 1.1
PNKP-215ENST00000600910 SCARA5Q6ZMJ2 495 aa21.95■■□□□ 1.1
PNKP-215ENST00000600910 BCL7CQ8WUZ0 217 aaPredicted RBP21.95■■□□□ 1.1
PNKP-215ENST00000600910 MMS19Q96T76 1030 aa21.95■■□□□ 1.1
PNKP-215ENST00000600910 UBE2TQ9NPD8 197 aaPredicted RBP21.95■■□□□ 1.1
PNKP-215ENST00000600910 AAASQ9NRG9 546 aa21.95■■□□□ 1.1
PNKP-215ENST00000600910 LINC01553A4QN01 128 aa21.94■■□□□ 1.1
PNKP-215ENST00000600910 I3L4J1 428 aa21.94■■□□□ 1.1
PNKP-215ENST00000600910 CA3P07451 260 aa21.94■■□□□ 1.1
PNKP-215ENST00000600910 P4HA1P13674 534 aa21.94■■□□□ 1.1
PNKP-215ENST00000600910 PAX3P23760 479 aa21.94■■□□□ 1.1
PNKP-215ENST00000600910 PBX2P40425 430 aa21.94■■□□□ 1.1
PNKP-215ENST00000600910 ASPAP45381 313 aa21.94■■□□□ 1.1
PNKP-215ENST00000600910 DSTYKQ6XUX3 929 aa21.94■■□□□ 1.1
PNKP-215ENST00000600910 KAT5Q92993 513 aa21.94■■□□□ 1.1
PNKP-215ENST00000600910 SENP8Q96LD8 212 aa21.94■■□□□ 1.1
PNKP-215ENST00000600910 ARID3AQ99856 593 aa21.94■■□□□ 1.1
PNKP-215ENST00000600910 PBX4Q9BYU1 374 aa21.94■■□□□ 1.1
PNKP-215ENST00000600910 AJAP1Q9UKB5 411 aaPredicted RBP21.94■■□□□ 1.1
PNKP-215ENST00000600910 YBX2Q9Y2T7 364 aaKnown RBP21.94■■□□□ 1.1
PNKP-215ENST00000600910 PCDHB12Q9Y5F1 795 aa21.94■■□□□ 1.1
PNKP-215ENST00000600910 FHOD1Q9Y613 1164 aa21.94■■□□□ 1.1
PNKP-215ENST00000600910 CARNS1A5YM72 827 aa21.93■■□□□ 1.1
PNKP-215ENST00000600910 ARHGEF15O94989 841 aa21.93■■□□□ 1.1
PNKP-215ENST00000600910 POLR2FP61218 127 aaKnown RBP21.93■■□□□ 1.1
PNKP-215ENST00000600910 GCNT1Q02742 428 aa21.93■■□□□ 1.1
PNKP-215ENST00000600910 CUL2Q13617 745 aa21.93■■□□□ 1.1
PNKP-215ENST00000600910 IQCEQ6IPM2 695 aa21.93■■□□□ 1.1
PNKP-215ENST00000600910 TMC6Q7Z403 805 aa21.93■■□□□ 1.1
PNKP-215ENST00000600910 SLC39A11Q8N1S5 342 aa21.93■■□□□ 1.1
PNKP-215ENST00000600910 IGSF21Q96ID5 467 aa21.93■■□□□ 1.1
PNKP-215ENST00000600910 DNAJC12Q9UKB3 198 aa21.93■■□□□ 1.1
PNKP-215ENST00000600910 CYB561D2O14569 222 aa21.92■■□□□ 1.1
PNKP-215ENST00000600910 TBXAS1P24557 533 aaPredicted RBP21.92■■□□□ 1.1
PNKP-215ENST00000600910 CDC25BP30305 580 aa21.92■■□□□ 1.1
PNKP-215ENST00000600910 FAXDC2Q96IV6 333 aa21.92■■□□□ 1.1
PNKP-215ENST00000600910 SUSD3Q96L08 255 aa21.92■■□□□ 1.1
PNKP-215ENST00000600910 KREMEN1Q96MU8 473 aa21.92■■□□□ 1.1
PNKP-215ENST00000600910 NUP58Q9BVL2 599 aa21.92■■□□□ 1.1
PNKP-215ENST00000600910 BCO2Q9BYV7 579 aa21.92■■□□□ 1.1
PNKP-215ENST00000600910 TTYH3Q9C0H2 523 aa21.92■■□□□ 1.1
PNKP-215ENST00000600910 SMYD3Q9H7B4 428 aa21.92■■□□□ 1.1
PNKP-215ENST00000600910 SPG21Q9NZD8 308 aa21.92■■□□□ 1.1
PNKP-215ENST00000600910 FBXL5Q9UKA1 691 aa21.92■■□□□ 1.1
PNKP-215ENST00000600910 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.92■■□□□ 1.11e-6■■□□□ 13.1
PNKP-215ENST00000600910 M0QZQ0 153 aa21.91■■□□□ 1.1
PNKP-215ENST00000600910 TRAPPC3O43617 180 aa21.91■■□□□ 1.1
PNKP-215ENST00000600910 HUS1O60921 280 aa21.91■■□□□ 1.1
PNKP-215ENST00000600910 WEE2P0C1S8 567 aa21.91■■□□□ 1.1
PNKP-215ENST00000600910 RFX1P22670 979 aa21.91■■□□□ 1.1
PNKP-215ENST00000600910 RAP1GAPP47736 663 aa21.91■■□□□ 1.1
PNKP-215ENST00000600910 MFAP3P55082 362 aa21.91■■□□□ 1.1
PNKP-215ENST00000600910 SOWAHAQ2M3V2 549 aa21.91■■□□□ 1.1
PNKP-215ENST00000600910 FUT10Q6P4F1 479 aa21.91■■□□□ 1.1
PNKP-215ENST00000600910 APPL2Q8NEU8 664 aa21.91■■□□□ 1.1
PNKP-215ENST00000600910 NAA15Q9BXJ9 866 aaKnown RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms