RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 RTP2Q5QGT7 225 aa14.02□□□□□ -0.17
SRRM1-223ENST00000600523 VARS2Q5ST30 1063 aaKnown RBP14.02□□□□□ -0.17
SRRM1-223ENST00000600523 LLGL2Q6P1M3 1020 aa14.02□□□□□ -0.17
SRRM1-223ENST00000600523 SASS6Q6UVJ0 657 aa14.02□□□□□ -0.17
SRRM1-223ENST00000600523 THEM5Q8N1Q8 247 aa14.02□□□□□ -0.17
SRRM1-223ENST00000600523 PARD3BQ8TEW8 1205 aa14.02□□□□□ -0.17
SRRM1-223ENST00000600523 SENP8Q96LD8 212 aa14.02□□□□□ -0.17
SRRM1-223ENST00000600523 IMPG2Q9BZV3 1241 aa14.02□□□□□ -0.17
SRRM1-223ENST00000600523 METTL14Q9HCE5 456 aaKnown RBP14.02□□□□□ -0.17
SRRM1-223ENST00000600523 CTNND2Q9UQB3 1225 aa14.02□□□□□ -0.17
SRRM1-223ENST00000600523 BACE2Q9Y5Z0 518 aa14.02□□□□□ -0.17
SRRM1-223ENST00000600523 HCFC2Q9Y5Z7 792 aa14.02□□□□□ -0.17
SRRM1-223ENST00000600523 TRIP11Q15643 1979 aa14.02□□□□□ -0.17
SRRM1-223ENST00000600523 M0QZQ0 153 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 CYB561D2O14569 222 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 HUS1O60921 280 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 LILRB3O75022 631 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 AKAP3O75969 853 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 P4HA1P13674 534 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 TYMPP19971 482 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 ELF1P32519 619 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 CASP4P49662 377 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 CTC1Q2NKJ3 1217 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 CTXN3Q4LDR2 81 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 CCDC183Q5T5S1 534 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 LMBRD2Q68DH5 695 aaPredicted RBP14.01□□□□□ -0.17
SRRM1-223ENST00000600523 ANKRD40Q6AI12 368 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 OVOS1Q6IE37 1185 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 CES5AQ6NT32 575 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 PRSS55Q6UWB4 352 aaPredicted RBP14.01□□□□□ -0.17
SRRM1-223ENST00000600523 TMEM184AQ6ZMB5 413 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 TRAPPC11Q7Z392 1133 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.01□□□□□ -0.17
SRRM1-223ENST00000600523 C1orf127Q8N9H9 656 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 LNX1Q8TBB1 728 aaPredicted RBP14.01□□□□□ -0.17
SRRM1-223ENST00000600523 GPT2Q8TD30 523 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 HPDLQ96IR7 371 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 CEP63Q96MT8 703 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 POP1Q99575 1024 aaKnown RBP14.01□□□□□ -0.17
SRRM1-223ENST00000600523 MTRRQ9UBK8 725 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 CHD7Q9P2D1 2997 aa14.01□□□□□ -0.17
SRRM1-223ENST00000600523 PDCD11Q14690 1871 aaKnown RBP14□□□□□ -0.17
SRRM1-223ENST00000600523 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14□□□□□ -0.17
SRRM1-223ENST00000600523 PPP1R3GB7ZBB8 358 aa14□□□□□ -0.17
SRRM1-223ENST00000600523 ATICP31939 592 aa14□□□□□ -0.17
SRRM1-223ENST00000600523 OR1D2P34982 312 aa14□□□□□ -0.17
SRRM1-223ENST00000600523 GTF2F1P35269 517 aaKnown RBP eCLIP14□□□□□ -0.17
SRRM1-223ENST00000600523 AARSP49588 968 aaKnown RBP eCLIP14□□□□□ -0.17
SRRM1-223ENST00000600523 TNNC1P63316 161 aa14□□□□□ -0.17
SRRM1-223ENST00000600523 COL19A1Q14993 1142 aa14□□□□□ -0.17
SRRM1-223ENST00000600523 CCDC40Q4G0X9 1142 aa14□□□□□ -0.17
SRRM1-223ENST00000600523 CT47A1Q5JQC4 288 aaPredicted RBP14□□□□□ -0.17
SRRM1-223ENST00000600523 LIN9Q5TKA1 542 aa14□□□□□ -0.17
SRRM1-223ENST00000600523 TCERG1LQ5VWI1 586 aa14□□□□□ -0.17
SRRM1-223ENST00000600523 PALB2Q86YC2 1186 aa14□□□□□ -0.17
SRRM1-223ENST00000600523 GLYCTKQ8IVS8 523 aa14□□□□□ -0.17
SRRM1-223ENST00000600523 TMEM86AQ8N2M4 240 aa14□□□□□ -0.17
SRRM1-223ENST00000600523 OR5B17Q8NGF7 314 aa14□□□□□ -0.17
SRRM1-223ENST00000600523 HDAC7Q8WUI4 952 aa14□□□□□ -0.17
SRRM1-223ENST00000600523 DNAI2Q9GZS0 605 aa14□□□□□ -0.17
SRRM1-223ENST00000600523 PLEKHA4Q9H4M7 779 aa14□□□□□ -0.17
SRRM1-223ENST00000600523 ARMCX3Q9UH62 379 aaPredicted RBP14□□□□□ -0.17
SRRM1-223ENST00000600523 RWDD2AQ9UIY3 292 aa14□□□□□ -0.17
SRRM1-223ENST00000600523 CD207Q9UJ71 328 aa14□□□□□ -0.17
SRRM1-223ENST00000600523 CDY1Q9Y6F8 540 aa14□□□□□ -0.17
SRRM1-223ENST00000600523 CDH23Q9H251 3354 aa14□□□□□ -0.17
SRRM1-223ENST00000600523 TRIM49BA6NDI0 452 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 OR6C75A6NL08 312 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 LRRIQ3A6PVS8 624 aaPredicted RBP13.99□□□□□ -0.17
SRRM1-223ENST00000600523 LINC01565O15544 149 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 OAZ2O95190 189 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 CPB1P15086 417 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 CD44P16070 742 aaKnown RBP13.99□□□□□ -0.17
SRRM1-223ENST00000600523 RPL17P18621 184 aaKnown RBP13.99□□□□□ -0.17
SRRM1-223ENST00000600523 TRIM21P19474 475 aaKnown RBP13.99□□□□□ -0.17
SRRM1-223ENST00000600523 GTF2H1P32780 548 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 CLCN4P51793 760 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 ARPP19P56211 112 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 WNT7BP56706 349 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 NLRP12P59046 1061 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 CLDN10P78369 228 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 CETN1Q12798 172 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 LEXMQ3ZCV2 418 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 ANKRD54Q6NXT1 300 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 CD300LGQ6UXG3 332 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 DPH6Q7L8W6 267 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 FILIP1Q7Z7B0 1213 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 SPATA18Q8TC71 538 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 MMS19Q96T76 1030 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 SFXN1Q9H9B4 322 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 BARX2Q9UMQ3 279 aaPredicted RBP13.99□□□□□ -0.17
SRRM1-223ENST00000600523 SNX9Q9Y5X1 595 aa13.99□□□□□ -0.17
SRRM1-223ENST00000600523 PTPRJQ12913 1337 aa13.98□□□□□ -0.17
SRRM1-223ENST00000600523 ANK1P16157 1881 aa13.98□□□□□ -0.17
SRRM1-223ENST00000600523 H3BQ06 376 aaPredicted RBP13.98□□□□□ -0.17
SRRM1-223ENST00000600523 PPEF2O14830 753 aa13.98□□□□□ -0.17
SRRM1-223ENST00000600523 TBX10O75333 385 aa13.98□□□□□ -0.17
SRRM1-223ENST00000600523 LETM1O95202 739 aaPredicted RBP13.98□□□□□ -0.17
SRRM1-223ENST00000600523 CCDC192P0DO97 292 aa13.98□□□□□ -0.17
SRRM1-223ENST00000600523 BMP6P22004 513 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms