RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 CHFRQ96EP1 664 aa19.4■□□□□ 0.7
SSBP4-207ENST00000600244 FZD8Q9H461 694 aa19.4■□□□□ 0.7
SSBP4-207ENST00000600244 VPS54Q9P1Q0 977 aa19.4■□□□□ 0.7
SSBP4-207ENST00000600244 ARID2Q68CP9 1835 aa19.39■□□□□ 0.7
SSBP4-207ENST00000600244 KIF26AQ9ULI4 1882 aaPredicted RBP19.39■□□□□ 0.7
SSBP4-207ENST00000600244 ACACAQ13085 2346 aa19.39■□□□□ 0.69
SSBP4-207ENST00000600244 CCDC194A0A1B0GVG4 234 aa19.39■□□□□ 0.69
SSBP4-207ENST00000600244 EIF4E1BA6NMX2 242 aaKnown RBP19.39■□□□□ 0.69
SSBP4-207ENST00000600244 UPK3BL1B0FP48 263 aa19.39■□□□□ 0.69
SSBP4-207ENST00000600244 UPK3BL2E5RIL1 263 aa19.39■□□□□ 0.69
SSBP4-207ENST00000600244 H7C4K7 107 aa19.39■□□□□ 0.69
SSBP4-207ENST00000600244 SLC37A4O43826 429 aa19.39■□□□□ 0.69
SSBP4-207ENST00000600244 RNF40O75150 1001 aa19.39■□□□□ 0.69
SSBP4-207ENST00000600244 GRSF1Q12849 480 aaKnown RBP eCLIP19.39■□□□□ 0.69
SSBP4-207ENST00000600244 SEMA3BQ13214 749 aa19.39■□□□□ 0.69
SSBP4-207ENST00000600244 FAM187BQ17R55 369 aa19.39■□□□□ 0.69
SSBP4-207ENST00000600244 RAB44Q7Z6P3 723 aaPredicted RBP19.39■□□□□ 0.69
SSBP4-207ENST00000600244 NOSTRINQ8IVI9 506 aa19.39■□□□□ 0.69
SSBP4-207ENST00000600244 FAM20AQ96MK3 541 aa19.39■□□□□ 0.69
SSBP4-207ENST00000600244 ZSWIM4Q9H7M6 989 aa19.39■□□□□ 0.69
SSBP4-207ENST00000600244 GOLGA2P5Q9HBQ8 144 aa19.39■□□□□ 0.69
SSBP4-207ENST00000600244 KCNMB3Q9NPA1 279 aa19.39■□□□□ 0.69
SSBP4-207ENST00000600244 ANO2Q9NQ90 1003 aa19.39■□□□□ 0.69
SSBP4-207ENST00000600244 PRMT7Q9NVM4 692 aaPredicted RBP19.39■□□□□ 0.69
SSBP4-207ENST00000600244 DDX25Q9UHL0 483 aaKnown RBP19.39■□□□□ 0.69
SSBP4-207ENST00000600244 EVLQ9UI08 416 aaPredicted RBP19.39■□□□□ 0.69
SSBP4-207ENST00000600244 SYN3O14994 580 aa19.38■□□□□ 0.69
SSBP4-207ENST00000600244 N4BP3O15049 544 aa19.38■□□□□ 0.69
SSBP4-207ENST00000600244 APBB3O95704 486 aa19.38■□□□□ 0.69
SSBP4-207ENST00000600244 APC2O95996 2303 aa19.38■□□□□ 0.69
SSBP4-207ENST00000600244 GBP1P32455 592 aa19.38■□□□□ 0.69
SSBP4-207ENST00000600244 GLRA4Q5JXX5 417 aa19.38■□□□□ 0.69
SSBP4-207ENST00000600244 SYT13Q7L8C5 426 aa19.38■□□□□ 0.69
SSBP4-207ENST00000600244 DYDC2Q96IM9 177 aa19.38■□□□□ 0.69
SSBP4-207ENST00000600244 SLKQ9H2G2 1235 aaPredicted RBP19.38■□□□□ 0.69
SSBP4-207ENST00000600244 M0R2N6 131 aa19.37■□□□□ 0.69
SSBP4-207ENST00000600244 DPYSL4O14531 572 aa19.37■□□□□ 0.69
SSBP4-207ENST00000600244 DGAT1O75907 488 aa19.37■□□□□ 0.69
SSBP4-207ENST00000600244 REC8O95072 547 aa19.37■□□□□ 0.69
SSBP4-207ENST00000600244 SEC24BO95487 1268 aa19.37■□□□□ 0.69
SSBP4-207ENST00000600244 EGFP01133 1207 aa19.37■□□□□ 0.69
SSBP4-207ENST00000600244 CTTNQ14247 550 aaKnown RBP19.37■□□□□ 0.69
SSBP4-207ENST00000600244 PTPAQ15257 358 aa19.37■□□□□ 0.69
SSBP4-207ENST00000600244 CYP2U1Q7Z449 544 aa19.37■□□□□ 0.69
SSBP4-207ENST00000600244 C11orf74Q86VG3 221 aa19.37■□□□□ 0.69
SSBP4-207ENST00000600244 BPIFB1Q8TDL5 484 aa19.37■□□□□ 0.69
SSBP4-207ENST00000600244 HNRNPLLQ8WVV9 542 aaKnown RBP19.37■□□□□ 0.69
SSBP4-207ENST00000600244 FBRSL1Q9HCM7 1045 aaKnown RBP19.37■□□□□ 0.69
SSBP4-207ENST00000600244 SH3GLB2Q9NR46 395 aa19.37■□□□□ 0.69
SSBP4-207ENST00000600244 TPCN1Q9ULQ1 816 aa19.37■□□□□ 0.69
SSBP4-207ENST00000600244 THADAQ6YHU6 1953 aa19.36■□□□□ 0.69
SSBP4-207ENST00000600244 SLITRK3O94933 977 aa19.36■□□□□ 0.69
SSBP4-207ENST00000600244 WEE1P30291 646 aa19.36■□□□□ 0.69
SSBP4-207ENST00000600244 RDXP35241 583 aaKnown RBP19.36■□□□□ 0.69
SSBP4-207ENST00000600244 NLRP5P59047 1200 aa19.36■□□□□ 0.69
SSBP4-207ENST00000600244 SOX4Q06945 474 aaPredicted RBP19.36■□□□□ 0.69
SSBP4-207ENST00000600244 LMAN2Q12907 356 aa19.36■□□□□ 0.69
SSBP4-207ENST00000600244 NTRK3Q16288 839 aa19.36■□□□□ 0.69
SSBP4-207ENST00000600244 CTXN3Q4LDR2 81 aa19.36■□□□□ 0.69
SSBP4-207ENST00000600244 RNF19BQ6ZMZ0 732 aa19.36■□□□□ 0.69
SSBP4-207ENST00000600244 GAREM2Q75VX8 874 aa19.36■□□□□ 0.69
SSBP4-207ENST00000600244 DNAJC25Q9H1X3 360 aa19.36■□□□□ 0.69
SSBP4-207ENST00000600244 INVSQ9Y283 1065 aa19.36■□□□□ 0.69
SSBP4-207ENST00000600244 GDAQ9Y2T3 454 aa19.36■□□□□ 0.69
SSBP4-207ENST00000600244 YIPF1Q9Y548 306 aa19.36■□□□□ 0.69
SSBP4-207ENST00000600244 OTOL1A6NHN0 477 aaPredicted RBP19.35■□□□□ 0.69
SSBP4-207ENST00000600244 VNN2O95498 520 aa19.35■□□□□ 0.69
SSBP4-207ENST00000600244 PRAMEF12O95522 483 aa19.35■□□□□ 0.69
SSBP4-207ENST00000600244 FAM193AP78312 1265 aa19.35■□□□□ 0.69
SSBP4-207ENST00000600244 CYP4A11Q02928 519 aa19.35■□□□□ 0.69
SSBP4-207ENST00000600244 EEF1DP3Q658K8 133 aa19.35■□□□□ 0.69
SSBP4-207ENST00000600244 CDCA2Q69YH5 1023 aaPredicted RBP19.35■□□□□ 0.69
SSBP4-207ENST00000600244 BEST2Q8NFU1 509 aa19.35■□□□□ 0.69
SSBP4-207ENST00000600244 KCNB2Q92953 911 aa19.35■□□□□ 0.69
SSBP4-207ENST00000600244 FAM83CQ9BQN1 747 aa19.35■□□□□ 0.69
SSBP4-207ENST00000600244 RNF26Q9BY78 433 aaPredicted RBP19.35■□□□□ 0.69
SSBP4-207ENST00000600244 POLR3FQ9H1D9 316 aaPredicted RBP19.35■□□□□ 0.69
SSBP4-207ENST00000600244 SCUBE2Q9NQ36 999 aa19.35■□□□□ 0.69
SSBP4-207ENST00000600244 HPS4Q9NQG7 708 aa19.35■□□□□ 0.69
SSBP4-207ENST00000600244 GKN1Q9NS71 199 aa19.35■□□□□ 0.69
SSBP4-207ENST00000600244 PCDHA4Q9UN74 947 aa19.35■□□□□ 0.69
SSBP4-207ENST00000600244 CELSR3Q9NYQ7 3312 aa19.35■□□□□ 0.69
SSBP4-207ENST00000600244 NID2Q14112 1375 aa19.34■□□□□ 0.69
SSBP4-207ENST00000600244 TRIP11Q15643 1979 aa19.34■□□□□ 0.69
SSBP4-207ENST00000600244 LYPLA2O95372 231 aa19.34■□□□□ 0.69
SSBP4-207ENST00000600244 BCKDHBP21953 392 aa19.34■□□□□ 0.69
SSBP4-207ENST00000600244 AKAP17AQ02040 695 aaKnown RBP19.34■□□□□ 0.69
SSBP4-207ENST00000600244 C19orf57Q0VDD7 668 aa19.34■□□□□ 0.69
SSBP4-207ENST00000600244 DMC1Q14565 340 aa19.34■□□□□ 0.69
SSBP4-207ENST00000600244 ZNF423Q2M1K9 1284 aa19.34■□□□□ 0.69
SSBP4-207ENST00000600244 TPH2Q8IWU9 490 aa19.34■□□□□ 0.69
SSBP4-207ENST00000600244 PIGKQ92643 395 aa19.34■□□□□ 0.69
SSBP4-207ENST00000600244 HAS1Q92839 578 aa19.34■□□□□ 0.69
SSBP4-207ENST00000600244 LRIG1Q96JA1 1093 aa19.34■□□□□ 0.69
SSBP4-207ENST00000600244 CCDC86Q9H6F5 360 aaKnown RBP19.34■□□□□ 0.69
SSBP4-207ENST00000600244 ANKEF1Q9NU02 776 aa19.34■□□□□ 0.69
SSBP4-207ENST00000600244 NAP1L2Q9ULW6 460 aaPredicted RBP19.34■□□□□ 0.69
SSBP4-207ENST00000600244 USP20Q9Y2K6 914 aa19.34■□□□□ 0.69
SSBP4-207ENST00000600244 NUP210Q8TEM1 1887 aaPredicted RBP19.34■□□□□ 0.69
SSBP4-207ENST00000600244 SMIM28A0A1B0GU29 152 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms