RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 TRAF3IP3Q9Y228 551 aa16.44■□□□□ 0.22
LIG1-219ENST00000600055 USP15Q9Y4E8 981 aaPredicted RBP16.44■□□□□ 0.22
LIG1-219ENST00000600055 CDY1Q9Y6F8 540 aa16.44■□□□□ 0.22
LIG1-219ENST00000600055 VWA8A3KMH1 1905 aa16.44■□□□□ 0.22
LIG1-219ENST00000600055 TBC1D4O60343 1298 aa16.43■□□□□ 0.22
LIG1-219ENST00000600055 WEE2P0C1S8 567 aa16.43■□□□□ 0.22
LIG1-219ENST00000600055 TMEM191BP0C7N4 346 aa16.43■□□□□ 0.22
LIG1-219ENST00000600055 HOXB8P17481 243 aaPredicted RBP16.43■□□□□ 0.22
LIG1-219ENST00000600055 SURF1Q15526 300 aa16.43■□□□□ 0.22
LIG1-219ENST00000600055 CAMK4Q16566 473 aa16.43■□□□□ 0.22
LIG1-219ENST00000600055 CSGALNACT2Q8N6G5 542 aa16.43■□□□□ 0.22
LIG1-219ENST00000600055 APPL2Q8NEU8 664 aa16.43■□□□□ 0.22
LIG1-219ENST00000600055 BORCS6Q96GS4 357 aa16.43■□□□□ 0.22
LIG1-219ENST00000600055 CGRRF1Q99675 332 aa16.43■□□□□ 0.22
LIG1-219ENST00000600055 DZANK1Q9NVP4 752 aa16.43■□□□□ 0.22
LIG1-219ENST00000600055 BACE2Q9Y5Z0 518 aa16.43■□□□□ 0.22
LIG1-219ENST00000600055 BRWD1Q9NSI6 2320 aa16.43■□□□□ 0.22
LIG1-219ENST00000600055 BIN1O00499 593 aa16.42■□□□□ 0.22
LIG1-219ENST00000600055 KRT19P08727 400 aa16.42■□□□□ 0.22
LIG1-219ENST00000600055 TNNI1P19237 187 aa16.42■□□□□ 0.22
LIG1-219ENST00000600055 TAF6P49848 677 aa16.42■□□□□ 0.22
LIG1-219ENST00000600055 ARPP19P56211 112 aa16.42■□□□□ 0.22
LIG1-219ENST00000600055 RAB33AQ14088 237 aa16.42■□□□□ 0.22
LIG1-219ENST00000600055 SMAD2Q15796 467 aaKnown RBP16.42■□□□□ 0.22
LIG1-219ENST00000600055 CTXN3Q4LDR2 81 aa16.42■□□□□ 0.22
LIG1-219ENST00000600055 ZCWPW2Q504Y3 356 aa16.42■□□□□ 0.22
LIG1-219ENST00000600055 CEP135Q66GS9 1140 aa16.42■□□□□ 0.22
LIG1-219ENST00000600055 TMC5Q6UXY8 1006 aa16.42■□□□□ 0.22
LIG1-219ENST00000600055 WDR49Q8IV35 697 aa16.42■□□□□ 0.22
LIG1-219ENST00000600055 KREMEN2Q8NCW0 462 aa16.42■□□□□ 0.22
LIG1-219ENST00000600055 TMEM174Q8WUU8 243 aa16.42■□□□□ 0.22
LIG1-219ENST00000600055 SUSD6Q92537 303 aa16.42■□□□□ 0.22
LIG1-219ENST00000600055 ZNF516Q92618 1163 aa16.42■□□□□ 0.22
LIG1-219ENST00000600055 ANKRD36BP1Q96IX9 119 aa16.42■□□□□ 0.22
LIG1-219ENST00000600055 FNBP1Q96RU3 617 aa16.42■□□□□ 0.22
LIG1-219ENST00000600055 LMBRD1Q9NUN5 540 aa16.42■□□□□ 0.22
LIG1-219ENST00000600055 FBXL5Q9UKA1 691 aa16.42■□□□□ 0.22
LIG1-219ENST00000600055 ITGA11Q9UKX5 1188 aa16.42■□□□□ 0.22
LIG1-219ENST00000600055 SPDYE4A6NLX3 237 aa16.41■□□□□ 0.22
LIG1-219ENST00000600055 H7C4K7 107 aa16.41■□□□□ 0.22
LIG1-219ENST00000600055 CYB561D2O14569 222 aa16.41■□□□□ 0.22
LIG1-219ENST00000600055 RFPL2O75678 378 aa16.41■□□□□ 0.22
LIG1-219ENST00000600055 TNNC2P02585 160 aa16.41■□□□□ 0.22
LIG1-219ENST00000600055 CD44P16070 742 aaKnown RBP16.41■□□□□ 0.22
LIG1-219ENST00000600055 BMP6P22004 513 aa16.41■□□□□ 0.22
LIG1-219ENST00000600055 NR2F2P24468 414 aa16.41■□□□□ 0.22
LIG1-219ENST00000600055 PMS1P54277 932 aaKnown RBP16.41■□□□□ 0.22
LIG1-219ENST00000600055 RBP5P82980 135 aa16.41■□□□□ 0.22
LIG1-219ENST00000600055 BFSP1Q12934 665 aa16.41■□□□□ 0.22
LIG1-219ENST00000600055 MYBPC2Q14324 1141 aa16.41■□□□□ 0.22
LIG1-219ENST00000600055 NFIL3Q16649 462 aa16.41■□□□□ 0.22
LIG1-219ENST00000600055 DUOXA2Q1HG44 320 aa16.41■□□□□ 0.22
LIG1-219ENST00000600055 COBLL1Q53SF7 1204 aa16.41■□□□□ 0.22
LIG1-219ENST00000600055 EEF2KMTQ96G04 330 aa16.41■□□□□ 0.22
LIG1-219ENST00000600055 UHRF1Q96T88 793 aaPredicted RBP16.41■□□□□ 0.22
LIG1-219ENST00000600055 ADAM7Q9H2U9 754 aa16.41■□□□□ 0.22
LIG1-219ENST00000600055 SFXN1Q9H9B4 322 aa16.41■□□□□ 0.22
LIG1-219ENST00000600055 PLXNA3P51805 1871 aa16.41■□□□□ 0.22
LIG1-219ENST00000600055 TCF20Q9UGU0 1960 aaKnown RBP16.4■□□□□ 0.22
LIG1-219ENST00000600055 A0A0C4DFX4 3053 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 LRRIQ3A6PVS8 624 aaPredicted RBP16.4■□□□□ 0.22
LIG1-219ENST00000600055 KPNA7A9QM74 516 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 AKAP3O75969 853 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 OAZ2O95190 189 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 OR4Q2P0C623 313 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 ODC1P11926 461 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 TYMPP19971 482 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 DLG4P78352 724 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 ROR1Q01973 937 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 YWHAHQ04917 246 aaPredicted RBP16.4■□□□□ 0.22
LIG1-219ENST00000600055 ADAM9Q13443 819 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 MORC3Q14149 939 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 SV2CQ496J9 727 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 SLC8B1Q6J4K2 584 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 ZNF280DQ6N043 979 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 TRAPPC11Q7Z392 1133 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 USP37Q86T82 979 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 ADSSL1Q8N142 457 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 PARD3BQ8TEW8 1205 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 ZNF560Q96MR9 790 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 FBXW11Q9UKB1 542 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 FAM50BQ9Y247 325 aa16.4■□□□□ 0.22
LIG1-219ENST00000600055 CCDC195A0A1B0GUA6 201 aa16.39■□□□□ 0.21
LIG1-219ENST00000600055 WDR27A2RRH5 827 aa16.39■□□□□ 0.21
LIG1-219ENST00000600055 TRIM49BA6NDI0 452 aa16.39■□□□□ 0.21
LIG1-219ENST00000600055 C1RP00736 705 aa16.39■□□□□ 0.21
LIG1-219ENST00000600055 CST3P01034 146 aaPredicted RBP16.39■□□□□ 0.21
LIG1-219ENST00000600055 PAX3P23760 479 aa16.39■□□□□ 0.21
LIG1-219ENST00000600055 PNPLA4P41247 253 aa16.39■□□□□ 0.21
LIG1-219ENST00000600055 ITIH3Q06033 890 aa16.39■□□□□ 0.21
LIG1-219ENST00000600055 WSCD1Q658N2 575 aa16.39■□□□□ 0.21
LIG1-219ENST00000600055 ANKRD40Q6AI12 368 aa16.39■□□□□ 0.21
LIG1-219ENST00000600055 OVOS1Q6IE37 1185 aa16.39■□□□□ 0.21
LIG1-219ENST00000600055 CENPPQ6IPU0 288 aa16.39■□□□□ 0.21
LIG1-219ENST00000600055 CES5AQ6NT32 575 aa16.39■□□□□ 0.21
LIG1-219ENST00000600055 LRRC52Q8N7C0 313 aa16.39■□□□□ 0.21
LIG1-219ENST00000600055 HDAC7Q8WUI4 952 aa16.39■□□□□ 0.21
LIG1-219ENST00000600055 GBP4Q96PP9 640 aa16.39■□□□□ 0.21
LIG1-219ENST00000600055 TMEM209Q96SK2 561 aa16.39■□□□□ 0.21
LIG1-219ENST00000600055 PLEKHA4Q9H4M7 779 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms