RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 USP37Q86T82 979 aa20.35■□□□□ 0.85
PNKP-213ENST00000599543 TMEM130Q8N3G9 435 aa20.35■□□□□ 0.85
PNKP-213ENST00000599543 FAM212AQ96EL1 285 aa20.35■□□□□ 0.85
PNKP-213ENST00000599543 TSPAN18Q96SJ8 248 aa20.35■□□□□ 0.85
PNKP-213ENST00000599543 FOXQ1Q9C009 403 aa20.35■□□□□ 0.85
PNKP-213ENST00000599543 MAFFQ9ULX9 164 aa20.35■□□□□ 0.85
PNKP-213ENST00000599543 CACNA1IQ9P0X4 2223 aa20.35■□□□□ 0.85
PNKP-213ENST00000599543 GVINP1Q7Z2Y8 2422 aa20.34■□□□□ 0.85
PNKP-213ENST00000599543 TCHHQ07283 1943 aa20.34■□□□□ 0.85
PNKP-213ENST00000599543 A0A0B4J269 797 aa20.34■□□□□ 0.85
PNKP-213ENST00000599543 ZNF197O14709 1029 aa20.34■□□□□ 0.85
PNKP-213ENST00000599543 ECI2O75521 394 aa20.34■□□□□ 0.85
PNKP-213ENST00000599543 MLF2Q15773 248 aaPredicted RBP20.34■□□□□ 0.85
PNKP-213ENST00000599543 ZBTB6Q15916 424 aa20.34■□□□□ 0.85
PNKP-213ENST00000599543 CYP4A22Q5TCH4 519 aa20.34■□□□□ 0.85
PNKP-213ENST00000599543 DSTYKQ6XUX3 929 aa20.34■□□□□ 0.85
PNKP-213ENST00000599543 MAP4K3Q8IVH8 894 aa20.34■□□□□ 0.85
PNKP-213ENST00000599543 KRI1Q8N9T8 703 aaKnown RBP20.34■□□□□ 0.85
PNKP-213ENST00000599543 OXCT2Q9BYC2 517 aaPredicted RBP20.34■□□□□ 0.85
PNKP-213ENST00000599543 CCSER1Q9C0I3 900 aa20.34■□□□□ 0.85
PNKP-213ENST00000599543 FBXO2Q9UK22 296 aaPredicted RBP20.34■□□□□ 0.85
PNKP-213ENST00000599543 TIMM13Q9Y5L4 95 aaPredicted RBP20.34■□□□□ 0.85
PNKP-213ENST00000599543 COL4A3Q01955 1670 aa20.34■□□□□ 0.85
PNKP-213ENST00000599543 TSC2P49815 1807 aa20.34■□□□□ 0.85
PNKP-213ENST00000599543 OAZ2O95190 189 aa20.33■□□□□ 0.85
PNKP-213ENST00000599543 NMT1P30419 496 aaKnown RBP20.33■□□□□ 0.85
PNKP-213ENST00000599543 DDIT3P35638 169 aa20.33■□□□□ 0.85
PNKP-213ENST00000599543 AARSP49588 968 aaKnown RBP eCLIP20.33■□□□□ 0.85
PNKP-213ENST00000599543 GUCY2FP51841 1108 aa20.33■□□□□ 0.85
PNKP-213ENST00000599543 GTF2BQ00403 316 aa20.33■□□□□ 0.85
PNKP-213ENST00000599543 PRKCQQ04759 706 aa20.33■□□□□ 0.85
PNKP-213ENST00000599543 TWF1Q12792 350 aa20.33■□□□□ 0.85
PNKP-213ENST00000599543 STK38Q15208 465 aa20.33■□□□□ 0.85
PNKP-213ENST00000599543 SLC44A4Q53GD3 710 aa20.33■□□□□ 0.85
PNKP-213ENST00000599543 PRSS36Q5K4E3 855 aa20.33■□□□□ 0.85
PNKP-213ENST00000599543 RNF19BQ6ZMZ0 732 aa20.33■□□□□ 0.85
PNKP-213ENST00000599543 USP49Q70CQ1 688 aa20.33■□□□□ 0.85
PNKP-213ENST00000599543 CD302Q8IX05 232 aa20.33■□□□□ 0.85
PNKP-213ENST00000599543 BEST2Q8NFU1 509 aa20.33■□□□□ 0.85
PNKP-213ENST00000599543 EPSTI1Q96J88 318 aa20.33■□□□□ 0.85
PNKP-213ENST00000599543 ZNF512Q96ME7 567 aaPredicted RBP20.33■□□□□ 0.85
PNKP-213ENST00000599543 FIZ1Q96SL8 496 aa20.33■□□□□ 0.85
PNKP-213ENST00000599543 CCDC39Q9UFE4 941 aa20.33■□□□□ 0.85
PNKP-213ENST00000599543 KANSL1LA0AUZ9 987 aa20.32■□□□□ 0.84
PNKP-213ENST00000599543 MICAL2O94851 1124 aa20.32■□□□□ 0.84
PNKP-213ENST00000599543 TXLNAP40222 546 aa20.32■□□□□ 0.84
PNKP-213ENST00000599543 DNM1Q05193 864 aaKnown RBP20.32■□□□□ 0.84
PNKP-213ENST00000599543 JADE1Q6IE81 842 aa20.32■□□□□ 0.84
PNKP-213ENST00000599543 SLC39A4Q6P5W5 647 aa20.32■□□□□ 0.84
PNKP-213ENST00000599543 TCEAL4Q96EI5 215 aa20.32■□□□□ 0.84
PNKP-213ENST00000599543 ZNF396Q96N95 335 aaPredicted RBP20.32■□□□□ 0.84
PNKP-213ENST00000599543 ASAH2Q9NR71 780 aa20.32■□□□□ 0.84
PNKP-213ENST00000599543 DLGAP2Q9P1A6 1054 aa20.32■□□□□ 0.84
PNKP-213ENST00000599543 STK17AQ9UEE5 414 aa20.32■□□□□ 0.84
PNKP-213ENST00000599543 CPSF3Q9UKF6 684 aaKnown RBP20.32■□□□□ 0.84
PNKP-213ENST00000599543 SCN1AP35498 2009 aa20.32■□□□□ 0.84
PNKP-213ENST00000599543 PATJQ8NI35 1801 aa20.32■□□□□ 0.84
PNKP-213ENST00000599543 FANCMQ8IYD8 2048 aa20.31■□□□□ 0.84
PNKP-213ENST00000599543 ADRB2P07550 413 aa20.31■□□□□ 0.84
PNKP-213ENST00000599543 NASPP49321 788 aaPredicted RBP20.31■□□□□ 0.84
PNKP-213ENST00000599543 TMEM132DQ14C87 1099 aa20.31■□□□□ 0.84
PNKP-213ENST00000599543 UBXN2BQ14CS0 331 aa20.31■□□□□ 0.84
PNKP-213ENST00000599543 SLC39A14Q15043 492 aa20.31■□□□□ 0.84
PNKP-213ENST00000599543 ZC2HC1CQ53FD0 456 aaPredicted RBP20.31■□□□□ 0.84
PNKP-213ENST00000599543 SPATA1Q5VX52 437 aa20.31■□□□□ 0.84
PNKP-213ENST00000599543 ADALQ6DHV7 355 aa20.31■□□□□ 0.84
PNKP-213ENST00000599543 OVOS1Q6IE37 1185 aa20.31■□□□□ 0.84
PNKP-213ENST00000599543 C1orf210Q8IVY1 113 aa20.31■□□□□ 0.84
PNKP-213ENST00000599543 LEMD2Q8NC56 503 aa20.31■□□□□ 0.84
PNKP-213ENST00000599543 ELSPBP1Q96BH3 223 aa20.31■□□□□ 0.84
PNKP-213ENST00000599543 PGLYRP2Q96PD5 576 aa20.31■□□□□ 0.84
PNKP-213ENST00000599543 DDX23Q9BUQ8 820 aaKnown RBP20.31■□□□□ 0.84
PNKP-213ENST00000599543 CEP72Q9P209 647 aa20.31■□□□□ 0.84
PNKP-213ENST00000599543 YIPF1Q9Y548 306 aa20.31■□□□□ 0.84
PNKP-213ENST00000599543 EP300Q09472 2414 aaPredicted RBP20.31■□□□□ 0.84
PNKP-213ENST00000599543 OR6C75A6NL08 312 aa20.3■□□□□ 0.84
PNKP-213ENST00000599543 PPEF2O14830 753 aa20.3■□□□□ 0.84
PNKP-213ENST00000599543 NFICP08651 508 aa20.3■□□□□ 0.84
PNKP-213ENST00000599543 OR4Q2P0C623 313 aa20.3■□□□□ 0.84
PNKP-213ENST00000599543 ODC1P11926 461 aa20.3■□□□□ 0.84
PNKP-213ENST00000599543 CCR2P41597 374 aa20.3■□□□□ 0.84
PNKP-213ENST00000599543 ACOT2P49753 483 aa20.3■□□□□ 0.84
PNKP-213ENST00000599543 PLD1Q13393 1074 aa20.3■□□□□ 0.84
PNKP-213ENST00000599543 TANGO2Q6ICL3 276 aa20.3■□□□□ 0.84
PNKP-213ENST00000599543 SLFN12LQ6IEE8 588 aa20.3■□□□□ 0.84
PNKP-213ENST00000599543 DYMQ7RTS9 669 aa20.3■□□□□ 0.84
PNKP-213ENST00000599543 LINC00301Q8NCQ3 95 aa20.3■□□□□ 0.84
PNKP-213ENST00000599543 BCO2Q9BYV7 579 aa20.3■□□□□ 0.84
PNKP-213ENST00000599543 ST6GALNAC4Q9H4F1 302 aa20.3■□□□□ 0.84
PNKP-213ENST00000599543 ZFP14Q9HCL3 533 aa20.3■□□□□ 0.84
PNKP-213ENST00000599543 DERAQ9Y315 318 aa20.3■□□□□ 0.84
PNKP-213ENST00000599543 SRPRBQ9Y5M8 271 aaKnown RBP20.3■□□□□ 0.84
PNKP-213ENST00000599543 TICRRQ7Z2Z1 1910 aa20.29■□□□□ 0.84
PNKP-213ENST00000599543 F5P12259 2224 aa20.29■□□□□ 0.84
PNKP-213ENST00000599543 ANKRD63C9JTQ0 380 aa20.29■□□□□ 0.84
PNKP-213ENST00000599543 LRRN2O75325 713 aa20.29■□□□□ 0.84
PNKP-213ENST00000599543 MYL4P12829 197 aa20.29■□□□□ 0.84
PNKP-213ENST00000599543 GLULP15104 373 aa20.29■□□□□ 0.84
PNKP-213ENST00000599543 TYMPP19971 482 aa20.29■□□□□ 0.84
PNKP-213ENST00000599543 PAX3P23760 479 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms