RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 HOXA9P31269 272 aa24.46■■□□□ 1.51
CCDC9-204ENST00000599398 AARSP49588 968 aaKnown RBP eCLIP24.46■■□□□ 1.51
CCDC9-204ENST00000599398 LILRA4P59901 499 aa24.46■■□□□ 1.51
CCDC9-204ENST00000599398 TRIM67Q6ZTA4 783 aa24.46■■□□□ 1.51
CCDC9-204ENST00000599398 GET4Q7L5D6 327 aaPredicted RBP24.46■■□□□ 1.51
CCDC9-204ENST00000599398 GRASPQ7Z6J2 395 aaPredicted RBP24.46■■□□□ 1.51
CCDC9-204ENST00000599398 BRSK2Q8IWQ3 736 aa24.46■■□□□ 1.51
CCDC9-204ENST00000599398 EFCAB13Q8IY85 973 aa24.46■■□□□ 1.51
CCDC9-204ENST00000599398 RAPGEFL1Q9UHV5 662 aa24.46■■□□□ 1.51
CCDC9-204ENST00000599398 SORCS3Q9UPU3 1222 aa24.46■■□□□ 1.51
CCDC9-204ENST00000599398 DOCK8Q8NF50 2099 aa24.46■■□□□ 1.51
CCDC9-204ENST00000599398 PVALEFA0A1B0GWK0 134 aa24.45■■□□□ 1.5
CCDC9-204ENST00000599398 ACTN4O43707 911 aaKnown RBP24.45■■□□□ 1.5
CCDC9-204ENST00000599398 N4BP1O75113 896 aaKnown RBP24.45■■□□□ 1.5
CCDC9-204ENST00000599398 CPB1P15086 417 aa24.45■■□□□ 1.5
CCDC9-204ENST00000599398 TFAMQ00059 246 aaKnown RBP24.45■■□□□ 1.5
CCDC9-204ENST00000599398 MTMR3Q13615 1198 aa24.45■■□□□ 1.5
CCDC9-204ENST00000599398 EPM2AIP1Q7L775 607 aaPredicted RBP24.45■■□□□ 1.5
CCDC9-204ENST00000599398 NT5DC4Q86YG4 428 aa24.45■■□□□ 1.5
CCDC9-204ENST00000599398 GPD1LQ8N335 351 aa24.45■■□□□ 1.5
CCDC9-204ENST00000599398 SENP8Q96LD8 212 aa24.45■■□□□ 1.5
CCDC9-204ENST00000599398 ANO9A1A5B4 782 aa24.44■■□□□ 1.5
CCDC9-204ENST00000599398 TMEM221A6NGB7 291 aa24.44■■□□□ 1.5
CCDC9-204ENST00000599398 M0R296 226 aa24.44■■□□□ 1.5
CCDC9-204ENST00000599398 PIRO00625 290 aa24.44■■□□□ 1.5
CCDC9-204ENST00000599398 KIAA0391O15091 583 aaKnown RBP24.44■■□□□ 1.5
CCDC9-204ENST00000599398 ABLIM3O94929 683 aa24.44■■□□□ 1.5
CCDC9-204ENST00000599398 ODC1P11926 461 aa24.44■■□□□ 1.5
CCDC9-204ENST00000599398 HOXD13P35453 343 aa24.44■■□□□ 1.5
CCDC9-204ENST00000599398 WNT7BP56706 349 aa24.44■■□□□ 1.5
CCDC9-204ENST00000599398 NTHL1P78549 312 aa24.44■■□□□ 1.5
CCDC9-204ENST00000599398 SIGLEC14Q08ET2 396 aa24.44■■□□□ 1.5
CCDC9-204ENST00000599398 HFE2Q6ZVN8 426 aa24.44■■□□□ 1.5
CCDC9-204ENST00000599398 RTL10Q7L3V2 364 aa24.44■■□□□ 1.5
CCDC9-204ENST00000599398 NELFCDQ8IXH7 590 aa24.44■■□□□ 1.5
CCDC9-204ENST00000599398 ZNF507Q8TCN5 953 aa24.44■■□□□ 1.5
CCDC9-204ENST00000599398 PAGE5Q96GU1 130 aa24.44■■□□□ 1.5
CCDC9-204ENST00000599398 MYADMQ96S97 322 aa24.44■■□□□ 1.5
CCDC9-204ENST00000599398 CYP4F11Q9HBI6 524 aa24.44■■□□□ 1.5
CCDC9-204ENST00000599398 SLC39A2Q9NP94 309 aa24.44■■□□□ 1.5
CCDC9-204ENST00000599398 UBE4BO95155 1302 aa24.43■■□□□ 1.5
CCDC9-204ENST00000599398 SPTLC1O15269 473 aa24.43■■□□□ 1.5
CCDC9-204ENST00000599398 OAZ2O95190 189 aa24.43■■□□□ 1.5
CCDC9-204ENST00000599398 LRG1P02750 347 aa24.43■■□□□ 1.5
CCDC9-204ENST00000599398 ATF2P15336 505 aa24.43■■□□□ 1.5
CCDC9-204ENST00000599398 PAX3P23760 479 aa24.43■■□□□ 1.5
CCDC9-204ENST00000599398 FSHRP23945 695 aa24.43■■□□□ 1.5
CCDC9-204ENST00000599398 SYKP43405 635 aa24.43■■□□□ 1.5
CCDC9-204ENST00000599398 EHHADHQ08426 723 aa24.43■■□□□ 1.5
CCDC9-204ENST00000599398 TPGS2Q68CL5 300 aa24.43■■□□□ 1.5
CCDC9-204ENST00000599398 OVOS1Q6IE37 1185 aa24.43■■□□□ 1.5
CCDC9-204ENST00000599398 CACTINQ8WUQ7 758 aaKnown RBP24.43■■□□□ 1.5
CCDC9-204ENST00000599398 GDPD2Q9HCC8 539 aa24.43■■□□□ 1.5
CCDC9-204ENST00000599398 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.43■■□□□ 1.5
CCDC9-204ENST00000599398 USP25Q9UHP3 1055 aa24.43■■□□□ 1.5
CCDC9-204ENST00000599398 HPSEQ9Y251 543 aa24.43■■□□□ 1.5
CCDC9-204ENST00000599398 ARHGEF37A1IGU5 675 aa24.42■■□□□ 1.5
CCDC9-204ENST00000599398 TYMPP19971 482 aa24.42■■□□□ 1.5
CCDC9-204ENST00000599398 TAF6P49848 677 aa24.42■■□□□ 1.5
CCDC9-204ENST00000599398 ADCY1Q08828 1119 aa24.42■■□□□ 1.5
CCDC9-204ENST00000599398 UBALD2Q8IYN6 164 aa24.42■■□□□ 1.5
CCDC9-204ENST00000599398 SCFD1Q8WVM8 642 aa24.42■■□□□ 1.5
CCDC9-204ENST00000599398 OXCT2Q9BYC2 517 aaPredicted RBP24.42■■□□□ 1.5
CCDC9-204ENST00000599398 PDE11AQ9HCR9 933 aa24.42■■□□□ 1.5
CCDC9-204ENST00000599398 EXOC1Q9NV70 894 aa24.42■■□□□ 1.5
CCDC9-204ENST00000599398 HCFC1R1Q9NWW0 138 aa24.42■■□□□ 1.5
CCDC9-204ENST00000599398 HSPBP1Q9NZL4 362 aa24.42■■□□□ 1.5
CCDC9-204ENST00000599398 HCN4Q9Y3Q4 1203 aa24.42■■□□□ 1.5
CCDC9-204ENST00000599398 SEC24AO95486 1093 aa24.41■■□□□ 1.5
CCDC9-204ENST00000599398 OR4Q2P0C623 313 aa24.41■■□□□ 1.5
CCDC9-204ENST00000599398 NDUFA8P51970 172 aa24.41■■□□□ 1.5
CCDC9-204ENST00000599398 HS2ST1Q7LGA3 356 aa24.41■■□□□ 1.5
CCDC9-204ENST00000599398 TCEAL8Q8IYN2 117 aa24.41■■□□□ 1.5
CCDC9-204ENST00000599398 FSIP1Q8NA03 581 aa24.41■■□□□ 1.5
CCDC9-204ENST00000599398 PBXIP1Q96AQ6 731 aa24.41■■□□□ 1.5
CCDC9-204ENST00000599398 ZNF560Q96MR9 790 aa24.41■■□□□ 1.5
CCDC9-204ENST00000599398 SMOC2Q9H3U7 446 aa24.41■■□□□ 1.5
CCDC9-204ENST00000599398 KCNK12Q9HB15 430 aa24.41■■□□□ 1.5
CCDC9-204ENST00000599398 AGPAT3Q9NRZ7 376 aa24.41■■□□□ 1.5
CCDC9-204ENST00000599398 EPS15L1Q9UBC2 864 aa24.41■■□□□ 1.5
CCDC9-204ENST00000599398 AFF4Q9UHB7 1163 aaKnown RBP24.41■■□□□ 1.5
CCDC9-204ENST00000599398 ZNF233A6NK53 670 aa24.4■■□□□ 1.5
CCDC9-204ENST00000599398 OR6C75A6NL08 312 aa24.4■■□□□ 1.5
CCDC9-204ENST00000599398 CYB561D2O14569 222 aa24.4■■□□□ 1.5
CCDC9-204ENST00000599398 CLIC2O15247 247 aa24.4■■□□□ 1.5
CCDC9-204ENST00000599398 POU2F2P09086 479 aa24.4■■□□□ 1.5
CCDC9-204ENST00000599398 NUCB2P80303 420 aa24.4■■□□□ 1.5
CCDC9-204ENST00000599398 PABPC1LQ4VXU2 614 aaKnown RBP24.4■■□□□ 1.5
CCDC9-204ENST00000599398 RNF19BQ6ZMZ0 732 aa24.4■■□□□ 1.5
CCDC9-204ENST00000599398 CBWD2Q8IUF1 395 aa24.4■■□□□ 1.5
CCDC9-204ENST00000599398 FAM84AQ96KN4 292 aa24.4■■□□□ 1.5
CCDC9-204ENST00000599398 DNMT3BQ9UBC3 853 aaKnown RBP24.4■■□□□ 1.5
CCDC9-204ENST00000599398 INSL5Q9Y5Q6 135 aa24.4■■□□□ 1.5
CCDC9-204ENST00000599398 TGFB1I1O43294 461 aa24.39■■□□□ 1.49
CCDC9-204ENST00000599398 KLRC4O43908 158 aa24.39■■□□□ 1.49
CCDC9-204ENST00000599398 ITGB3P05106 788 aa24.39■■□□□ 1.49
CCDC9-204ENST00000599398 TMEM191BP0C7N4 346 aa24.39■■□□□ 1.49
CCDC9-204ENST00000599398 POLR2BP30876 1174 aaKnown RBP24.39■■□□□ 1.49
CCDC9-204ENST00000599398 CYP2J2P51589 502 aa24.39■■□□□ 1.49
CCDC9-204ENST00000599398 SV2CQ496J9 727 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms