RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 GUCY2FP51841 1108 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 CEBPZQ03701 1054 aaKnown RBP10.63□□□□□ -0.71
VRK3-216ENST00000599342 UBXN2BQ14CS0 331 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 PTPAQ15257 358 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 ZC2HC1CQ53FD0 456 aaPredicted RBP10.63□□□□□ -0.71
VRK3-216ENST00000599342 PRSS36Q5K4E3 855 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 SPATA1Q5VX52 437 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 RRAGBQ5VZM2 374 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 ADALQ6DHV7 355 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 OVOS1Q6IE37 1185 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 SLC39A4Q6P5W5 647 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 ZC3H14Q6PJT7 736 aaKnown RBP10.63□□□□□ -0.71
VRK3-216ENST00000599342 SFR1Q86XK3 245 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 C1orf210Q8IVY1 113 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 TMEM130Q8N3G9 435 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 ELSPBP1Q96BH3 223 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 HVCN1Q96D96 273 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 TCEAL4Q96EI5 215 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 PGLYRP2Q96PD5 576 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 FIZ1Q96SL8 496 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 BCO2Q9BYV7 579 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 ZFP14Q9HCL3 533 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 CPSF3Q9UKF6 684 aaKnown RBP10.63□□□□□ -0.71
VRK3-216ENST00000599342 EXOC7Q9UPT5 735 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 DERAQ9Y315 318 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 YIPF1Q9Y548 306 aa10.63□□□□□ -0.71
VRK3-216ENST00000599342 SRPRBQ9Y5M8 271 aaKnown RBP10.63□□□□□ -0.71
VRK3-216ENST00000599342 ANKRD63C9JTQ0 380 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 ADRB2P07550 413 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 OR4Q2P0C623 313 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 TYMPP19971 482 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 SYT1P21579 422 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 ALDH1A3P47895 512 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 ACOT2P49753 483 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 EPHB3P54753 998 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 LILRA4P59901 499 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 RESTQ13127 1097 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 MYBPC2Q14324 1141 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 C9orf57Q5W0N0 161 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 TANGO2Q6ICL3 276 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 ARMCX5Q6P1M9 558 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 CCDC73Q6ZRK6 1079 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 TPRG1Q6ZUI0 275 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 SV2BQ7L1I2 683 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 HS6ST3Q8IZP7 471 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 KCNG4Q8TDN1 519 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 POMGNT1Q8WZA1 660 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 CLIC6Q96NY7 704 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 ST6GALNAC4Q9H4F1 302 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 SLITRK6Q9H5Y7 841 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 ASB7Q9H672 318 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 MRPL44Q9H9J2 332 aaKnown RBP10.62□□□□□ -0.71
VRK3-216ENST00000599342 DLGAP2Q9P1A6 1054 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 CEP72Q9P209 647 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 SEL1LQ9UBV2 794 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 FBXO2Q9UK22 296 aaPredicted RBP10.62□□□□□ -0.71
VRK3-216ENST00000599342 AGO2Q9UKV8 859 aaKnown RBP10.62□□□□□ -0.71
VRK3-216ENST00000599342 DSEQ9UL01 958 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 MRPS17Q9Y2R5 130 aaKnown RBP10.62□□□□□ -0.71
VRK3-216ENST00000599342 C2CD2Q9Y426 696 aa10.62□□□□□ -0.71
VRK3-216ENST00000599342 PIEZO1Q92508 2521 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 FAM170BA6NMN3 283 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 TISP43B9A030 160 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 TULP1O00294 542 aaPredicted RBP10.61□□□□□ -0.71
VRK3-216ENST00000599342 PPEF2O14830 753 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 NCAM2O15394 837 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 GCNT3O95395 438 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 GAP43P17677 238 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 CCR2P41597 374 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 STAT6P42226 847 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 MAGEA9P43362 315 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 DUSP4Q13115 394 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 GPR17Q13304 367 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 GRM2Q14416 872 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 POSTNQ15063 836 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 FAM78AQ5JUQ0 283 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 FAM173BQ6P4H8 233 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 ZNF852Q6ZMS4 543 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 USP49Q70CQ1 688 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 ZNF720Q7Z2F6 126 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 METTL23Q86XA0 190 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 DNASE1L2Q92874 299 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 SMARCD2Q92925 531 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 INTS4Q96HW7 963 aaKnown RBP10.61□□□□□ -0.71
VRK3-216ENST00000599342 SENP8Q96LD8 212 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 ASB16Q96NS5 453 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 DDX23Q9BUQ8 820 aaKnown RBP10.61□□□□□ -0.71
VRK3-216ENST00000599342 TRMT61BQ9BVS5 477 aaKnown RBP10.61□□□□□ -0.71
VRK3-216ENST00000599342 OSBPL6Q9BZF3 934 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 PLA2G2FQ9BZM2 168 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 GPR88Q9GZN0 384 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 SEMA4AQ9H3S1 761 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 ZSCAN16Q9H4T2 348 aaPredicted RBP10.61□□□□□ -0.71
VRK3-216ENST00000599342 BRD9Q9H8M2 597 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 LTB4R2Q9NPC1 389 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 SPATA6Q9NWH7 488 aaPredicted RBP10.61□□□□□ -0.71
VRK3-216ENST00000599342 STYXL1Q9Y6J8 313 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 DOCK6Q96HP0 2047 aa10.61□□□□□ -0.71
VRK3-216ENST00000599342 NOTCH4Q99466 2003 aa10.6□□□□□ -0.71
VRK3-216ENST00000599342 ANO9A1A5B4 782 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms