RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 PPEF2O14830 753 aa20.96■□□□□ 0.95
IRF3-222ENST00000599144 ZNF263O14978 683 aa20.96■□□□□ 0.95
IRF3-222ENST00000599144 SOAT2O75908 522 aa20.96■□□□□ 0.95
IRF3-222ENST00000599144 TNFSF9P41273 254 aa20.96■□□□□ 0.95
IRF3-222ENST00000599144 MATR3P43243 847 aaKnown RBP eCLIP20.96■□□□□ 0.95
IRF3-222ENST00000599144 SPEM2Q0P670 501 aa20.96■□□□□ 0.95
IRF3-222ENST00000599144 NOLC1Q14978 699 aaKnown RBP eCLIP20.96■□□□□ 0.95
IRF3-222ENST00000599144 WDR44Q5JSH3 913 aa20.96■□□□□ 0.95
IRF3-222ENST00000599144 TMEM161BQ8NDZ6 487 aa20.96■□□□□ 0.95
IRF3-222ENST00000599144 APPL2Q8NEU8 664 aa20.96■□□□□ 0.95
IRF3-222ENST00000599144 LLPHQ9BRT6 129 aaKnown RBP20.96■□□□□ 0.95
IRF3-222ENST00000599144 DNAJC25Q9H1X3 360 aa20.96■□□□□ 0.95
IRF3-222ENST00000599144 SLC27A5Q9Y2P5 690 aa20.96■□□□□ 0.95
IRF3-222ENST00000599144 RBM19Q9Y4C8 960 aaKnown RBP20.96■□□□□ 0.95
IRF3-222ENST00000599144 SLC38A8A6NNN8 435 aa20.95■□□□□ 0.94
IRF3-222ENST00000599144 TOM1L1O75674 476 aa20.95■□□□□ 0.94
IRF3-222ENST00000599144 MICAL2O94851 1124 aa20.95■□□□□ 0.94
IRF3-222ENST00000599144 MARCKSP29966 332 aaPredicted RBP20.95■□□□□ 0.94
IRF3-222ENST00000599144 STRN3Q13033 797 aa20.95■□□□□ 0.94
IRF3-222ENST00000599144 PRR23BQ6ZRT6 265 aa20.95■□□□□ 0.94
IRF3-222ENST00000599144 TMC8Q8IU68 726 aa20.95■□□□□ 0.94
IRF3-222ENST00000599144 TTC9BQ8N6N2 239 aa20.95■□□□□ 0.94
IRF3-222ENST00000599144 SECISBP2LQ93073 1101 aaKnown RBP20.95■□□□□ 0.94
IRF3-222ENST00000599144 KIF12Q96FN5 646 aa20.95■□□□□ 0.94
IRF3-222ENST00000599144 TMEM209Q96SK2 561 aa20.95■□□□□ 0.94
IRF3-222ENST00000599144 LRRC3Q9BY71 257 aa20.95■□□□□ 0.94
IRF3-222ENST00000599144 C2orf42Q9NWW7 574 aa20.95■□□□□ 0.94
IRF3-222ENST00000599144 GMEB2Q9UKD1 530 aa20.95■□□□□ 0.94
IRF3-222ENST00000599144 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.95■□□□□ 0.94
IRF3-222ENST00000599144 CEP250Q9BV73 2442 aa20.95■□□□□ 0.94
IRF3-222ENST00000599144 FRYLO94915 3013 aa20.94■□□□□ 0.94
IRF3-222ENST00000599144 ARNTLO00327 626 aa20.94■□□□□ 0.94
IRF3-222ENST00000599144 MAPTP10636 758 aaKnown RBP20.94■□□□□ 0.94
IRF3-222ENST00000599144 CHRNB1P11230 501 aa20.94■□□□□ 0.94
IRF3-222ENST00000599144 EPHA5P54756 1037 aa20.94■□□□□ 0.94
IRF3-222ENST00000599144 DUSP4Q13115 394 aa20.94■□□□□ 0.94
IRF3-222ENST00000599144 Q6ZS52 159 aa20.94■□□□□ 0.94
IRF3-222ENST00000599144 ZFYVE19Q96K21 471 aa20.94■□□□□ 0.94
IRF3-222ENST00000599144 LRRC3BQ96PB8 259 aa20.94■□□□□ 0.94
IRF3-222ENST00000599144 CDV3Q9UKY7 258 aaKnown RBP20.94■□□□□ 0.94
IRF3-222ENST00000599144 CHURC1-FNTBB4DL54 471 aa20.93■□□□□ 0.94
IRF3-222ENST00000599144 PLS3P13797 630 aa20.93■□□□□ 0.94
IRF3-222ENST00000599144 GUCY2CP25092 1073 aa20.93■□□□□ 0.94
IRF3-222ENST00000599144 U2AF2P26368 475 aaKnown RBP eCLIP20.93■□□□□ 0.941e-7■■■■■ 32.6
IRF3-222ENST00000599144 FNTBP49356 437 aa20.93■□□□□ 0.94
IRF3-222ENST00000599144 HMGN5P82970 282 aaKnown RBP20.93■□□□□ 0.94
IRF3-222ENST00000599144 YWHAHQ04917 246 aaPredicted RBP20.93■□□□□ 0.94
IRF3-222ENST00000599144 HEATR6Q6AI08 1181 aaKnown RBP20.93■□□□□ 0.94
IRF3-222ENST00000599144 TXNDC11Q6PKC3 985 aa20.93■□□□□ 0.94
IRF3-222ENST00000599144 DTHD1Q6ZMT9 781 aa20.93■□□□□ 0.94
IRF3-222ENST00000599144 MFSD6LQ8IWD5 586 aa20.93■□□□□ 0.94
IRF3-222ENST00000599144 ATAD1Q8NBU5 361 aa20.93■□□□□ 0.94
IRF3-222ENST00000599144 DEPDC1BQ8WUY9 529 aa20.93■□□□□ 0.94
IRF3-222ENST00000599144 RAB34Q9BZG1 259 aa20.93■□□□□ 0.94
IRF3-222ENST00000599144 COL4A2P08572 1712 aa20.92■□□□□ 0.94
IRF3-222ENST00000599144 TRIP11Q15643 1979 aa20.92■□□□□ 0.94
IRF3-222ENST00000599144 LACTBL1A8MY62 500 aa20.92■□□□□ 0.94
IRF3-222ENST00000599144 M0QZQ0 153 aa20.92■□□□□ 0.94
IRF3-222ENST00000599144 CLDN3O15551 220 aa20.92■□□□□ 0.94
IRF3-222ENST00000599144 KRT37O76014 449 aa20.92■□□□□ 0.94
IRF3-222ENST00000599144 LMNB2Q03252 620 aa20.92■□□□□ 0.94
IRF3-222ENST00000599144 MCL1Q07820 350 aa20.92■□□□□ 0.94
IRF3-222ENST00000599144 DSTYKQ6XUX3 929 aa20.92■□□□□ 0.94
IRF3-222ENST00000599144 YAF2Q8IY57 180 aa20.92■□□□□ 0.94
IRF3-222ENST00000599144 BEST2Q8NFU1 509 aa20.92■□□□□ 0.94
IRF3-222ENST00000599144 SPIRE2Q8WWL2 714 aa20.92■□□□□ 0.94
IRF3-222ENST00000599144 BICD1Q96G01 975 aa20.92■□□□□ 0.94
IRF3-222ENST00000599144 NTPCRQ9BSD7 190 aaKnown RBP20.92■□□□□ 0.94
IRF3-222ENST00000599144 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.92■□□□□ 0.94
IRF3-222ENST00000599144 TTC26A0AVF1 554 aa20.91■□□□□ 0.94
IRF3-222ENST00000599144 HRO43593 1189 aa20.91■□□□□ 0.94
IRF3-222ENST00000599144 OAZ2O95190 189 aa20.91■□□□□ 0.94
IRF3-222ENST00000599144 CXCL12P48061 93 aa20.91■□□□□ 0.94
IRF3-222ENST00000599144 CCR3P51677 355 aa20.91■□□□□ 0.94
IRF3-222ENST00000599144 KPNA1P52294 538 aaPredicted RBP20.91■□□□□ 0.94
IRF3-222ENST00000599144 GPR161Q8N6U8 529 aaKnown RBP20.91■□□□□ 0.94
IRF3-222ENST00000599144 CSGALNACT1Q8TDX6 532 aa20.91■□□□□ 0.94
IRF3-222ENST00000599144 BORCS6Q96GS4 357 aa20.91■□□□□ 0.94
IRF3-222ENST00000599144 MKNK1Q9BUB5 465 aa20.91■□□□□ 0.94
IRF3-222ENST00000599144 FAM126AQ9BYI3 521 aaPredicted RBP20.91■□□□□ 0.94
IRF3-222ENST00000599144 TRPV4Q9HBA0 871 aa20.91■□□□□ 0.94
IRF3-222ENST00000599144 TRPV5Q9NQA5 729 aa20.91■□□□□ 0.94
IRF3-222ENST00000599144 STK24Q9Y6E0 443 aa20.91■□□□□ 0.94
IRF3-222ENST00000599144 MTMR11A4FU01 709 aa20.9■□□□□ 0.94
IRF3-222ENST00000599144 PLA2G4BP0C869 781 aa20.9■□□□□ 0.94
IRF3-222ENST00000599144 LRPAP1P30533 357 aa20.9■□□□□ 0.94
IRF3-222ENST00000599144 SLC12A3P55017 1021 aa20.9■□□□□ 0.94
IRF3-222ENST00000599144 ZBTB6Q15916 424 aa20.9■□□□□ 0.94
IRF3-222ENST00000599144 ZPBP2Q6X784 338 aa20.9■□□□□ 0.94
IRF3-222ENST00000599144 USP37Q86T82 979 aa20.9■□□□□ 0.94
IRF3-222ENST00000599144 ARID3BQ8IVW6 561 aaPredicted RBP20.9■□□□□ 0.94
IRF3-222ENST00000599144 SYT2Q8N9I0 419 aaPredicted RBP20.9■□□□□ 0.94
IRF3-222ENST00000599144 LEMD2Q8NC56 503 aa20.9■□□□□ 0.94
IRF3-222ENST00000599144 FAM212AQ96EL1 285 aa20.9■□□□□ 0.94
IRF3-222ENST00000599144 SMG9Q9H0W8 520 aaKnown RBP20.9■□□□□ 0.94
IRF3-222ENST00000599144 C17orf75Q9HAS0 396 aa20.9■□□□□ 0.94
IRF3-222ENST00000599144 GTSE1Q9NYZ3 720 aa20.9■□□□□ 0.94
IRF3-222ENST00000599144 RAB23Q9ULC3 237 aa20.9■□□□□ 0.94
IRF3-222ENST00000599144 VWA3AA6NCI4 1184 aa20.89■□□□□ 0.93
IRF3-222ENST00000599144 PRR5-ARHGAP8B1AHC4 643 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms