RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 SYT2Q8N9I0 419 aaPredicted RBP18.53■□□□□ 0.56
PNKP-210ENST00000597965 TMEM161BQ8NDZ6 487 aa18.53■□□□□ 0.56
PNKP-210ENST00000597965 FAM3CQ92520 227 aa18.53■□□□□ 0.56
PNKP-210ENST00000597965 TCEAL4Q96EI5 215 aa18.53■□□□□ 0.56
PNKP-210ENST00000597965 BICD1Q96G01 975 aa18.53■□□□□ 0.56
PNKP-210ENST00000597965 CHRDQ9H2X0 955 aa18.53■□□□□ 0.56
PNKP-210ENST00000597965 SLITRK6Q9H5Y7 841 aa18.53■□□□□ 0.56
PNKP-210ENST00000597965 ZNF334Q9HCZ1 680 aaPredicted RBP18.53■□□□□ 0.56
PNKP-210ENST00000597965 GMEB2Q9UKD1 530 aa18.53■□□□□ 0.56
PNKP-210ENST00000597965 UBQLN1Q9UMX0 589 aaKnown RBP18.53■□□□□ 0.56
PNKP-210ENST00000597965 SMG5Q9UPR3 1016 aaKnown RBP18.53■□□□□ 0.56
PNKP-210ENST00000597965 FRYLO94915 3013 aa18.53■□□□□ 0.56
PNKP-210ENST00000597965 PDCD11Q14690 1871 aaKnown RBP18.52■□□□□ 0.56
PNKP-210ENST00000597965 OR6C75A6NL08 312 aa18.52■□□□□ 0.56
PNKP-210ENST00000597965 SFI1A8K8P3 1242 aa18.52■□□□□ 0.56
PNKP-210ENST00000597965 M0QZQ0 153 aa18.52■□□□□ 0.56
PNKP-210ENST00000597965 SLC26A4O43511 780 aa18.52■□□□□ 0.56
PNKP-210ENST00000597965 FGF19O95750 216 aa18.52■□□□□ 0.56
PNKP-210ENST00000597965 MAPTP10636 758 aaKnown RBP18.52■□□□□ 0.56
PNKP-210ENST00000597965 LRPAP1P30533 357 aa18.52■□□□□ 0.56
PNKP-210ENST00000597965 GDI1P31150 447 aa18.52■□□□□ 0.56
PNKP-210ENST00000597965 EPHB3P54753 998 aa18.52■□□□□ 0.56
PNKP-210ENST00000597965 MTAPQ13126 283 aa18.52■□□□□ 0.56
PNKP-210ENST00000597965 GRM2Q14416 872 aa18.52■□□□□ 0.56
PNKP-210ENST00000597965 MAP4K3Q8IVH8 894 aa18.52■□□□□ 0.56
PNKP-210ENST00000597965 MFSD6LQ8IWD5 586 aa18.52■□□□□ 0.56
PNKP-210ENST00000597965 ZSCAN18Q8TBC5 510 aaPredicted RBP18.52■□□□□ 0.56
PNKP-210ENST00000597965 CSGALNACT1Q8TDX6 532 aa18.52■□□□□ 0.56
PNKP-210ENST00000597965 KCNN1Q92952 543 aa18.52■□□□□ 0.56
PNKP-210ENST00000597965 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.52■□□□□ 0.56
PNKP-210ENST00000597965 NDRG2Q9UN36 371 aaKnown RBP18.52■□□□□ 0.56
PNKP-210ENST00000597965 PP2D1A8MPX8 630 aa18.51■□□□□ 0.55
PNKP-210ENST00000597965 MYL4P12829 197 aa18.51■□□□□ 0.55
PNKP-210ENST00000597965 CDC25AP30304 524 aa18.51■□□□□ 0.55
PNKP-210ENST00000597965 ALDH1A3P47895 512 aa18.51■□□□□ 0.55
PNKP-210ENST00000597965 RSPO4Q2I0M5 234 aaPredicted RBP18.51■□□□□ 0.55
PNKP-210ENST00000597965 ARL6IP4Q66PJ3 421 aaKnown RBP18.51■□□□□ 0.55
PNKP-210ENST00000597965 VITQ6UXI7 678 aa18.51■□□□□ 0.55
PNKP-210ENST00000597965 BEST2Q8NFU1 509 aa18.51■□□□□ 0.55
PNKP-210ENST00000597965 KIF12Q96FN5 646 aa18.51■□□□□ 0.55
PNKP-210ENST00000597965 ZBTB45Q96K62 511 aaPredicted RBP18.51■□□□□ 0.55
PNKP-210ENST00000597965 MMTAG2Q9BU76 263 aaKnown RBP18.51■□□□□ 0.55
PNKP-210ENST00000597965 CEP72Q9P209 647 aa18.51■□□□□ 0.55
PNKP-210ENST00000597965 HSFX1Q9UBD0 423 aa18.51■□□□□ 0.55
PNKP-210ENST00000597965 ODF2LQ9ULJ1 636 aa18.51■□□□□ 0.55
PNKP-210ENST00000597965 ASB3Q9Y575 518 aa18.51■□□□□ 0.55
PNKP-210ENST00000597965 PIAS3Q9Y6X2 628 aa18.51■□□□□ 0.55
PNKP-210ENST00000597965 F5P12259 2224 aa18.51■□□□□ 0.55
PNKP-210ENST00000597965 DNAH14Q0VDD8 3507 aa18.51■□□□□ 0.55
PNKP-210ENST00000597965 CEP250Q9BV73 2442 aa18.51■□□□□ 0.55
PNKP-210ENST00000597965 CXCL8P10145 99 aa18.5■□□□□ 0.55
PNKP-210ENST00000597965 CCR2P41597 374 aa18.5■□□□□ 0.55
PNKP-210ENST00000597965 LIG4P49917 911 aa18.5■□□□□ 0.55
PNKP-210ENST00000597965 ATP2C1P98194 919 aaPredicted RBP18.5■□□□□ 0.55
PNKP-210ENST00000597965 RAD51AP2Q09MP3 1159 aa18.5■□□□□ 0.55
PNKP-210ENST00000597965 GPR17Q13304 367 aa18.5■□□□□ 0.55
PNKP-210ENST00000597965 FZD5Q13467 585 aa18.5■□□□□ 0.55
PNKP-210ENST00000597965 LRRC32Q14392 662 aa18.5■□□□□ 0.55
PNKP-210ENST00000597965 MCTP1Q6DN14 999 aa18.5■□□□□ 0.55
PNKP-210ENST00000597965 DSTYKQ6XUX3 929 aa18.5■□□□□ 0.55
PNKP-210ENST00000597965 RNF19BQ6ZMZ0 732 aa18.5■□□□□ 0.55
PNKP-210ENST00000597965 CD302Q8IX05 232 aa18.5■□□□□ 0.55
PNKP-210ENST00000597965 CELF5Q8N6W0 485 aaKnown RBP18.5■□□□□ 0.55
PNKP-210ENST00000597965 AK8Q96MA6 479 aa18.5■□□□□ 0.55
PNKP-210ENST00000597965 C8orf33Q9H7E9 229 aaPredicted RBP18.5■□□□□ 0.55
PNKP-210ENST00000597965 TUBGCP4Q9UGJ1 667 aa18.5■□□□□ 0.55
PNKP-210ENST00000597965 YIPF1Q9Y548 306 aa18.5■□□□□ 0.55
PNKP-210ENST00000597965 TTC26A0AVF1 554 aa18.49■□□□□ 0.55
PNKP-210ENST00000597965 HNRNPDLO14979 420 aaKnown RBP18.49■□□□□ 0.55
PNKP-210ENST00000597965 CHADO15335 359 aa18.49■□□□□ 0.55
PNKP-210ENST00000597965 PLA2G4BP0C869 781 aa18.49■□□□□ 0.55
PNKP-210ENST00000597965 AARSP49588 968 aaKnown RBP eCLIP18.49■□□□□ 0.55
PNKP-210ENST00000597965 SLC12A3P55017 1021 aa18.49■□□□□ 0.55
PNKP-210ENST00000597965 MYBPC2Q14324 1141 aa18.49■□□□□ 0.55
PNKP-210ENST00000597965 ZBTB6Q15916 424 aa18.49■□□□□ 0.55
PNKP-210ENST00000597965 IL17AQ16552 155 aa18.49■□□□□ 0.55
PNKP-210ENST00000597965 ARMCX5Q6P1M9 558 aa18.49■□□□□ 0.55
PNKP-210ENST00000597965 KCNK18Q7Z418 384 aa18.49■□□□□ 0.55
PNKP-210ENST00000597965 HAUS6Q7Z4H7 955 aa18.49■□□□□ 0.55
PNKP-210ENST00000597965 ITIH5Q86UX2 942 aa18.49■□□□□ 0.55
PNKP-210ENST00000597965 HS6ST3Q8IZP7 471 aa18.49■□□□□ 0.55
PNKP-210ENST00000597965 ZSWIM3Q96MP5 696 aa18.49■□□□□ 0.55
PNKP-210ENST00000597965 RPF1Q9H9Y2 349 aaKnown RBP18.49■□□□□ 0.55
PNKP-210ENST00000597965 LMAN1LQ9HAT1 526 aa18.49■□□□□ 0.55
PNKP-210ENST00000597965 CDV3Q9UKY7 258 aaKnown RBP18.49■□□□□ 0.55
PNKP-210ENST00000597965 COL4A3Q01955 1670 aa18.49■□□□□ 0.55
PNKP-210ENST00000597965 HEPACAM2A8MVW5 462 aa18.48■□□□□ 0.55
PNKP-210ENST00000597965 SEC24BO95487 1268 aa18.48■□□□□ 0.55
PNKP-210ENST00000597965 ODC1P11926 461 aa18.48■□□□□ 0.55
PNKP-210ENST00000597965 TYMPP19971 482 aa18.48■□□□□ 0.55
PNKP-210ENST00000597965 CNR2P34972 360 aa18.48■□□□□ 0.55
PNKP-210ENST00000597965 CXCL12P48061 93 aa18.48■□□□□ 0.55
PNKP-210ENST00000597965 NCKAP1LP55160 1127 aa18.48■□□□□ 0.55
PNKP-210ENST00000597965 TEAD2Q15562 447 aa18.48■□□□□ 0.55
PNKP-210ENST00000597965 SEZ6Q53EL9 994 aa18.48■□□□□ 0.55
PNKP-210ENST00000597965 ARHGAP15Q53QZ3 475 aa18.48■□□□□ 0.55
PNKP-210ENST00000597965 OVOS1Q6IE37 1185 aa18.48■□□□□ 0.55
PNKP-210ENST00000597965 TSSK4Q6SA08 328 aa18.48■□□□□ 0.55
PNKP-210ENST00000597965 ZNF687Q8N1G0 1237 aa18.48■□□□□ 0.55
PNKP-210ENST00000597965 FAM200AQ8TCP9 573 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms